Jatropha Genome Database

JcCB0612491.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0612491.10 + phase: 0 /partial
         (86 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g043170.1 Inositol polyphosphate kinase chr08_pseudom...    72   7e-14
IMGA|Medtr8g034400.1 Inositol polyphosphate kinase chr08_pseudom...    67   3e-12

>IMGA|Medtr8g043170.1 Inositol polyphosphate kinase
           chr08_pseudomolecule_IMGAG_V3 9234919-9232988 E
           EGN_Mt090430 20090702
          Length = 286

 Score = 72.0 bits (175), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 39/66 (59%), Positives = 47/66 (71%), Gaps = 1/66 (1%)

Query: 4   SVLIVYEKGSMLKRP-SSGAVVKLVDFAHVTEANGVIDHNFLGGLCSLIKMISEILTSPD 62
           SVL+VYEK        S+ AVVKLVDFAHV +A G IDHNFLGGLCSLIK + ++LT   
Sbjct: 218 SVLVVYEKDEKEDEKKSASAVVKLVDFAHVVDAKGAIDHNFLGGLCSLIKFVKDVLTGLS 277

Query: 63  ECRTKN 68
           + +T N
Sbjct: 278 DVQTSN 283


>IMGA|Medtr8g034400.1 Inositol polyphosphate kinase
           chr08_pseudomolecule_IMGAG_V3 7411147-7414281 E
           EGN_Mt090430 20090702
          Length = 354

 Score = 66.6 bits (161), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 39/71 (54%), Positives = 45/71 (63%), Gaps = 10/71 (14%)

Query: 4   SVLIVYEKGSMLKRPSSG-AVVKLVDFAHVTEANGVIDHNFLGGLCSLIKMISEILT--- 59
           SVL+VYEK        S  AVVKL+DFAHV +A G IDHNFLGGLCSLIK + ++L    
Sbjct: 284 SVLVVYEKDEKENEKKSARAVVKLIDFAHVVDAKGAIDHNFLGGLCSLIKFVKDVLAGLG 343

Query: 60  ------SPDEC 64
                 S DEC
Sbjct: 344 DAGNNVSKDEC 354