Jatropha Genome Database

JcCB0601851.10

BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0601851.10 + phase: 1 /pseudo/partial
         (85 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g104850.1 DNA topoisomerase II; Serine/threonine-spec...   168   6e-43
IMGA|Medtr4g067100.1 Serine/threonine-specific protein phosphata...   153   2e-38
IMGA|Medtr1g110780.1 Galactose oxidase, central chr01_pseudomole...   124   9e-30
IMGA|Medtr1g111130.1 Galactose oxidase, central chr01_pseudomole...   124   9e-30
IMGA|Medtr7g138990.1 Acyl-coA-binding protein, ACBP; Serine/thre...    53   4e-08

>IMGA|Medtr2g104850.1 DNA topoisomerase II;
           Serine/threonine-specific protein phosphatase and
           bis(5-nucleosyl)-tetraphosphatase
           chr02_pseudomolecule_IMGAG_V3 24835580-24845823 E
           EGN_Mt090430 20090702
          Length = 995

 Score =  168 bits (425), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 81/85 (95%), Positives = 82/85 (96%)

Query: 1   LAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLH 60
           LAGATADVHCYDVLTNKWSR+TPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLH
Sbjct: 137 LAGATADVHCYDVLTNKWSRLTPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLH 196

Query: 61  VLDLTQQRPRWHRVVVQGPGPGPRY 85
           VLDLTQQ PRWHRV VQGPGPG RY
Sbjct: 197 VLDLTQQWPRWHRVSVQGPGPGSRY 221


>IMGA|Medtr4g067100.1 Serine/threonine-specific protein
          phosphatase and bis(5-nucleosyl)-tetraphosphatase
          chr04_pseudomolecule_IMGAG_V3 12922861-12934391 E
          EGN_Mt090430 20090702
          Length = 873

 Score =  153 bits (387), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 83/85 (97%), Positives = 83/85 (97%)

Query: 1  LAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLH 60
          LAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLH
Sbjct: 15 LAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLH 74

Query: 61 VLDLTQQRPRWHRVVVQGPGPGPRY 85
          VLDLTQQRPRWHRV V GPGPGPRY
Sbjct: 75 VLDLTQQRPRWHRVGVPGPGPGPRY 99


>IMGA|Medtr1g110780.1 Galactose oxidase, central
           chr01_pseudomolecule_IMGAG_V3 23426878-23424656 E
           EGN_Mt090430 20090702
          Length = 204

 Score =  124 bits (312), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 59/85 (69%), Positives = 67/85 (78%)

Query: 1   LAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLH 60
           LAG T  VH YDV + KW+RI P G+PP+PRAAH A  VGTMVV QGGIGPAG S +DL+
Sbjct: 69  LAGVTNSVHAYDVDSKKWTRIKPAGDPPSPRAAHAAATVGTMVVFQGGIGPAGHSTDDLY 128

Query: 61  VLDLTQQRPRWHRVVVQGPGPGPRY 85
           VLDLT  + +WHRVVVQG GPGPRY
Sbjct: 129 VLDLTNDKYKWHRVVVQGQGPGPRY 153


>IMGA|Medtr1g111130.1 Galactose oxidase, central
           chr01_pseudomolecule_IMGAG_V3 23577588-23576311 E
           EGN_Mt090430 20090702
          Length = 174

 Score =  124 bits (312), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 59/85 (69%), Positives = 67/85 (78%)

Query: 1   LAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLH 60
           LAG T  VH YDV + KW+RI P G+PP+PRAAH A  VGTMVV QGGIGPAG S +DL+
Sbjct: 69  LAGVTNSVHAYDVDSKKWTRIKPAGDPPSPRAAHAAATVGTMVVFQGGIGPAGHSTDDLY 128

Query: 61  VLDLTQQRPRWHRVVVQGPGPGPRY 85
           VLDLT  + +WHRVVVQG GPGPRY
Sbjct: 129 VLDLTNDKYKWHRVVVQGQGPGPRY 153


>IMGA|Medtr7g138990.1 Acyl-coA-binding protein, ACBP;
           Serine/threonine protein phosphatase, BSU1;
           chr07_pseudomolecule_IMGAG_V3 33127183-33117108 E
           EGN_Mt090430 20090702
          Length = 664

 Score = 52.8 bits (125), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 33/79 (41%), Positives = 39/79 (49%), Gaps = 4/79 (5%)

Query: 7   DVHCYDVLTNKWSRITPFGEPPTPRAAHVATA-VGTMVVIQGGIGPAGLSAEDLHVLDLT 65
           D+H  D+ T  W  I   G PP+PR+ H A   V   ++I GG G       DLHVLDL 
Sbjct: 320 DLHILDLETMTWDEIDAVGVPPSPRSDHTAAVHVDRYLLIFGG-GSHATCYNDLHVLDL- 377

Query: 66  QQRPRWHRVVVQGPGPGPR 84
            Q   W R   QG  P PR
Sbjct: 378 -QTMEWSRPTQQGEIPTPR 395



 Score = 46.2 bits (108), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 8/90 (8%)

Query: 1   LAGATAD------VHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGL 54
           +AG T D      V  +D+    WS +  +G+PP  R     + VG  +VI GG      
Sbjct: 257 IAGHTKDPSESIQVREFDLQRATWSTLKTYGKPPISRGGQSVSLVGNTLVIFGGQDAKRT 316

Query: 55  SAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 84
              DLH+LDL  +   W  +   G  P PR
Sbjct: 317 LLNDLHILDL--ETMTWDEIDAVGVPPSPR 344