Jatropha Genome Database

JcCB0589561.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0589561.10 - phase: 2 /partial
         (292 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g120680.1 Pyridoxal-5-phosphate-dependent enzyme, bet...   547   e-156
IMGA|Medtr8g053320.1 hypothetical protein chr08_pseudomolecule_I...    51   7e-07
IMGA|Medtr8g053160.1 hypothetical protein chr08_pseudomolecule_I...    51   7e-07

>IMGA|Medtr2g120680.1 Pyridoxal-5-phosphate-dependent enzyme, beta
           subunit chr02_pseudomolecule_IMGAG_V3 28446316-28448239
           E EGN_Mt090430 20090702
          Length = 532

 Score =  547 bits (1409), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 261/290 (90%), Positives = 274/290 (94%), Gaps = 2/290 (0%)

Query: 3   RRAADENIRDEARRQNSASAANTFSAKYVPFNAGPDSREWYSLDEIVYRSRCGGLLDVQH 62
           RR ADENIRDEARR+N +   + FSAKYVPFNA P S E YSLDEIVYRS+ G LLDVQH
Sbjct: 63  RRPADENIRDEARRKNVSQ--HLFSAKYVPFNADPSSTESYSLDEIVYRSQSGDLLDVQH 120

Query: 63  DMEALKKFDGAYWRDLFDSRVGKTTWPYGSGVWSKKEWVLPEIDSDDIVSAFEGNSNLFW 122
           D+ ALKKFDGAYWR+LFDSRVGKTTWPYGSGVWSKKEWVLPEID DDIVSAFEGNSNLFW
Sbjct: 121 DLTALKKFDGAYWRNLFDSRVGKTTWPYGSGVWSKKEWVLPEIDDDDIVSAFEGNSNLFW 180

Query: 123 AERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKQPVVGVGCASTGDT 182
           AERFGKQFLGM+DLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKM +PVVGVGCASTGDT
Sbjct: 181 AERFGKQFLGMSDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMNRPVVGVGCASTGDT 240

Query: 183 SAALSAYCASAGIPSIVFLPVNKISMAQLVQPIANGAFVLSIDTDFDGCMKLIREVTAEL 242
           SAALSAYCASAGIPSIVFLP N+IS+AQLVQPIANGAFVLSIDTDFDGCM+LIREVTAEL
Sbjct: 241 SAALSAYCASAGIPSIVFLPANRISIAQLVQPIANGAFVLSIDTDFDGCMQLIREVTAEL 300

Query: 243 PIYLANSLNSLRLEGQKTAAIEILQQFNWEVPDWVIVPGGNLGNIYAFYK 292
           PIYLANSLNSLRLEGQKTAAIEILQQF+W+VPDWVIVPGGNLGNIYAFYK
Sbjct: 301 PIYLANSLNSLRLEGQKTAAIEILQQFDWQVPDWVIVPGGNLGNIYAFYK 350


>IMGA|Medtr8g053320.1 hypothetical protein
          chr08_pseudomolecule_IMGAG_V3 11973484-11973193 H
          EGN_Mt090430 20090702
          Length = 61

 Score = 51.2 bits (121), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 21/39 (53%), Positives = 29/39 (74%)

Query: 47 EIVYRSRCGGLLDVQHDMEALKKFDGAYWRDLFDSRVGK 85
          +IVY+S  G +LD+ +D++AL KFDG YW +LFDS   K
Sbjct: 22 KIVYQSNSGSVLDIHNDIKALAKFDGPYWSNLFDSAAPK 60


>IMGA|Medtr8g053160.1 hypothetical protein
          chr08_pseudomolecule_IMGAG_V3 11877539-11877248 H
          EGN_Mt090430 20090702
          Length = 61

 Score = 51.2 bits (121), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 21/39 (53%), Positives = 29/39 (74%)

Query: 47 EIVYRSRCGGLLDVQHDMEALKKFDGAYWRDLFDSRVGK 85
          +IVY+S  G +LD+ +D++AL KFDG YW +LFDS   K
Sbjct: 22 KIVYQSNSGSVLDIHNDIKALAKFDGPYWSNLFDSAAPK 60