Jatropha Genome Database

JcCB0582281.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0582281.10 - phase: 0 
         (84 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g132410.1 Ras GTPase chr02_pseudomolecule_IMGAG_V3 32...    74   1e-14
IMGA|Medtr6g099230.1 Ras small GTPase, Rab type chr06_pseudomole...    70   2e-13
IMGA|Medtr8g089410.1 Ras GTPase chr08_pseudomolecule_IMGAG_V3 19...    69   7e-13
IMGA|Medtr4g098540.1 Ras GTPase chr04_pseudomolecule_IMGAG_V3 21...    67   2e-12
IMGA|Medtr5g022500.1 Ras GTPase chr05_pseudomolecule_IMGAG_V3 87...    65   7e-12

>IMGA|Medtr2g132410.1 Ras GTPase chr02_pseudomolecule_IMGAG_V3
           32003647-32002013 E EGN_Mt090430 20090702
          Length = 196

 Score = 74.3 bits (181), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 33/46 (71%), Positives = 38/46 (82%)

Query: 18  LREDKHYLADHPGLVAVTTAQGEELRKQIGAAYYIECSSKTQQVCK 63
           LRED+ YL DHPG  A+TTAQGEEL++ IGAA Y+ECSSKTQQ  K
Sbjct: 122 LREDRQYLIDHPGATAITTAQGEELKRAIGAAVYLECSSKTQQNVK 167


>IMGA|Medtr6g099230.1 Ras small GTPase, Rab type
           chr06_pseudomolecule_IMGAG_V3 21851607-21855202 F
           EGN_Mt090430 20090702
          Length = 209

 Score = 70.5 bits (171), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 33/46 (71%), Positives = 37/46 (80%)

Query: 18  LREDKHYLADHPGLVAVTTAQGEELRKQIGAAYYIECSSKTQQVCK 63
           LRED+ Y ADH G   +T+A+GEELRKQIGAA YIECSSKTQQ  K
Sbjct: 122 LREDRGYFADHTGYNVITSAEGEELRKQIGAAAYIECSSKTQQNVK 167


>IMGA|Medtr8g089410.1 Ras GTPase chr08_pseudomolecule_IMGAG_V3
           19209541-19213679 F EGN_Mt090430 20090702
          Length = 197

 Score = 68.6 bits (166), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 31/46 (67%), Positives = 35/46 (76%)

Query: 18  LREDKHYLADHPGLVAVTTAQGEELRKQIGAAYYIECSSKTQQVCK 63
           LR+DK +  DHPG V +TTAQGEELRK I A  YIECSSK+QQ  K
Sbjct: 122 LRDDKQFFVDHPGAVPITTAQGEELRKLINAPAYIECSSKSQQNVK 167


>IMGA|Medtr4g098540.1 Ras GTPase chr04_pseudomolecule_IMGAG_V3
           21246015-21242846 F EGN_Mt090430 20090702
          Length = 197

 Score = 67.0 bits (162), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 30/46 (65%), Positives = 34/46 (73%)

Query: 18  LREDKHYLADHPGLVAVTTAQGEELRKQIGAAYYIECSSKTQQVCK 63
           LR+D  +  DHPG   +TTAQGEELRK IGA  YIECSSKTQ+  K
Sbjct: 122 LRDDSQFFQDHPGAAPITTAQGEELRKLIGAPVYIECSSKTQKNVK 167


>IMGA|Medtr5g022500.1 Ras GTPase chr05_pseudomolecule_IMGAG_V3
           8775550-8778414 E EGN_Mt090430 20090702
          Length = 197

 Score = 65.5 bits (158), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 30/46 (65%), Positives = 35/46 (76%)

Query: 18  LREDKHYLADHPGLVAVTTAQGEELRKQIGAAYYIECSSKTQQVCK 63
           LR+DK +  DHPG V +TTAQGEELRK I A  YIECSSK+Q+  K
Sbjct: 122 LRDDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKSQENVK 167