Jatropha Genome Database

JcCB0581961.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0581961.10 - phase: 0 /pseudo/partial
         (257 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g009190.1 Dynamin central region; Dynamin; Dynamin GT...   436   e-123
IMGA|AC235758_24.1 Dynamin central region; Dynamin; Dynamin GTPa...   411   e-115
IMGA|Medtr8g009280.1 Dynamin central region; Dynamin; Dynamin GT...   366   e-102
IMGA|Medtr8g009280.2 Dynamin central region; Dynamin; Dynamin GT...   365   e-102
IMGA|Medtr4g156910.1 Dynamin central region; Dynamin; Dynamin GT...   361   e-100
IMGA|Medtr4g156910.2 Dynamin central region; Dynamin chr04_pseud...   360   e-100
IMGA|Medtr4g121300.1 Dynamin central region; Dynamin; Dynamin GT...   107   4e-24
IMGA|Medtr4g121440.1 Dynamin central region; Dynamin; Dynamin GT...   107   5e-24
IMGA|Medtr2g009740.1 Dynamin central region; Dynamin; Dynamin GT...   107   7e-24
IMGA|Medtr4g031780.1 Dynamin central region; Dynamin; Dynamin GT...   105   3e-23
IMGA|Medtr2g009740.3 Dynamin central region; Dynamin; Dynamin GT...    94   6e-20

>IMGA|Medtr5g009190.1 Dynamin central region; Dynamin; Dynamin
           GTPase effector chr05_pseudomolecule_IMGAG_V3
           1949615-1944184 E EGN_Mt090430 20090702
          Length = 611

 Score =  436 bits (1122), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 205/228 (89%), Positives = 221/228 (96%)

Query: 15  SGERTLGVLTKIDLMDKGTDAVDILEGKAYRLKFPWVGVVNRSQADINKNVDMIAARRRE 74
           +GERT+GVLTKIDLMDKGTDAV++LEG+AYRLK+PW+GVVNRSQADINKNVDMIAARRRE
Sbjct: 203 TGERTIGVLTKIDLMDKGTDAVEMLEGRAYRLKYPWIGVVNRSQADINKNVDMIAARRRE 262

Query: 75  REYFANSPEYKHLAHRMGSEHLAKMLSKHLETVIKSRIPGIQSLINKTIIELESELSRLG 134
           REYF+N+PEYKHLAHRMGSEHLAKMLSKHLE VIKS+IPGIQSLI+KTI +LE+ELSRLG
Sbjct: 263 REYFSNTPEYKHLAHRMGSEHLAKMLSKHLEAVIKSKIPGIQSLISKTIADLETELSRLG 322

Query: 135 KPIAADAGGKLYTIMEICRLFDQIYKEHLDGVRPGGEKIYNVFDNQLPAALKRLQFDKQL 194
           KPIAAD GGKLY IMEICR FDQI+KEHLDGVRPGG+KIYNVFDNQLPAALKRLQFDKQL
Sbjct: 323 KPIAADEGGKLYAIMEICRTFDQIFKEHLDGVRPGGDKIYNVFDNQLPAALKRLQFDKQL 382

Query: 195 SMENIRKLIAEADGYQPHLIAPEQGYRRLIESSLITIRGPAEAAVDAV 242
           SMENIRKLI EADGYQPHLIAPEQGYRRLIESSL +IRGPAEAAVDAV
Sbjct: 383 SMENIRKLITEADGYQPHLIAPEQGYRRLIESSLTSIRGPAEAAVDAV 430


>IMGA|AC235758_24.1 Dynamin central region; Dynamin; Dynamin GTPase
           effector AC235758.1 170271-163793 H EGN_Mt090430
           20090702
          Length = 620

 Score =  411 bits (1057), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 191/227 (84%), Positives = 211/227 (92%)

Query: 16  GERTLGVLTKIDLMDKGTDAVDILEGKAYRLKFPWVGVVNRSQADINKNVDMIAARRRER 75
           G+RT GVLTKIDLMDKGTDAVDILEGK+++L FPW+GVVNRSQADINKNVDMIAARRRE 
Sbjct: 202 GDRTFGVLTKIDLMDKGTDAVDILEGKSFKLNFPWIGVVNRSQADINKNVDMIAARRREN 261

Query: 76  EYFANSPEYKHLAHRMGSEHLAKMLSKHLETVIKSRIPGIQSLINKTIIELESELSRLGK 135
           EYFAN+PEY+HLA RMGS HL K+LSKHLETVIKSRIPG+QSLINKTIIELE+EL+R+G+
Sbjct: 262 EYFANTPEYRHLAPRMGSVHLGKVLSKHLETVIKSRIPGLQSLINKTIIELETELNRIGR 321

Query: 136 PIAADAGGKLYTIMEICRLFDQIYKEHLDGVRPGGEKIYNVFDNQLPAALKRLQFDKQLS 195
           PIAAD GGKLY IMEICR FDQI+K+ LDG+R GGEKIY VFDNQ PAALKRLQFDK LS
Sbjct: 322 PIAADTGGKLYMIMEICRTFDQIFKDRLDGIRSGGEKIYQVFDNQFPAALKRLQFDKHLS 381

Query: 196 MENIRKLIAEADGYQPHLIAPEQGYRRLIESSLITIRGPAEAAVDAV 242
           M+N+RKLI EADGYQPHLIAPEQGYRRLIES L++IRGPAEAAVDAV
Sbjct: 382 MDNVRKLITEADGYQPHLIAPEQGYRRLIESCLVSIRGPAEAAVDAV 428


>IMGA|Medtr8g009280.1 Dynamin central region; Dynamin; Dynamin
           GTPase effector chr08_pseudomolecule_IMGAG_V3
           1289979-1297612 F EGN_Mt090430 20090702
          Length = 637

 Score =  366 bits (939), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 165/237 (69%), Positives = 208/237 (87%)

Query: 15  SGERTLGVLTKIDLMDKGTDAVDILEGKAYRLKFPWVGVVNRSQADINKNVDMIAARRRE 74
           SGERT GVLTK+DLMDKGT+A+D+LEG++YRL+ PWVGVVNRSQADINKN DMI ARR+E
Sbjct: 208 SGERTFGVLTKLDLMDKGTNALDVLEGRSYRLQHPWVGVVNRSQADINKNTDMIVARRKE 267

Query: 75  REYFANSPEYKHLAHRMGSEHLAKMLSKHLETVIKSRIPGIQSLINKTIIELESELSRLG 134
            EYF  SP+Y HLA +MGSE+LAK+LS+HLE+VI++RIP I SLINK+I ELESE+  LG
Sbjct: 268 VEYFETSPDYGHLASKMGSEYLAKLLSQHLESVIRARIPSITSLINKSIEELESEMDHLG 327

Query: 135 KPIAADAGGKLYTIMEICRLFDQIYKEHLDGVRPGGEKIYNVFDNQLPAALKRLQFDKQL 194
           +PIA DAG +LYTI+E+CR F++++KEHLDG RPGG++IYNVFDNQLPAAL++L  DK L
Sbjct: 328 RPIAVDAGAQLYTILELCRKFERVFKEHLDGGRPGGDRIYNVFDNQLPAALRKLPIDKHL 387

Query: 195 SMENIRKLIAEADGYQPHLIAPEQGYRRLIESSLITIRGPAEAAVDAVCMNINKLIR 251
           S++N++++++EADGYQPHLIAPEQGYRRLIE +L   RGPAEA+VDAV   + +L+R
Sbjct: 388 SLQNVKRVVSEADGYQPHLIAPEQGYRRLIEGTLSYFRGPAEASVDAVHFVLKELVR 444


>IMGA|Medtr8g009280.2 Dynamin central region; Dynamin; Dynamin
           GTPase effector chr08_pseudomolecule_IMGAG_V3
           1289979-1297612 F EGN_Mt090430 20090702
          Length = 467

 Score =  365 bits (938), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 165/237 (69%), Positives = 208/237 (87%)

Query: 15  SGERTLGVLTKIDLMDKGTDAVDILEGKAYRLKFPWVGVVNRSQADINKNVDMIAARRRE 74
           SGERT GVLTK+DLMDKGT+A+D+LEG++YRL+ PWVGVVNRSQADINKN DMI ARR+E
Sbjct: 38  SGERTFGVLTKLDLMDKGTNALDVLEGRSYRLQHPWVGVVNRSQADINKNTDMIVARRKE 97

Query: 75  REYFANSPEYKHLAHRMGSEHLAKMLSKHLETVIKSRIPGIQSLINKTIIELESELSRLG 134
            EYF  SP+Y HLA +MGSE+LAK+LS+HLE+VI++RIP I SLINK+I ELESE+  LG
Sbjct: 98  VEYFETSPDYGHLASKMGSEYLAKLLSQHLESVIRARIPSITSLINKSIEELESEMDHLG 157

Query: 135 KPIAADAGGKLYTIMEICRLFDQIYKEHLDGVRPGGEKIYNVFDNQLPAALKRLQFDKQL 194
           +PIA DAG +LYTI+E+CR F++++KEHLDG RPGG++IYNVFDNQLPAAL++L  DK L
Sbjct: 158 RPIAVDAGAQLYTILELCRKFERVFKEHLDGGRPGGDRIYNVFDNQLPAALRKLPIDKHL 217

Query: 195 SMENIRKLIAEADGYQPHLIAPEQGYRRLIESSLITIRGPAEAAVDAVCMNINKLIR 251
           S++N++++++EADGYQPHLIAPEQGYRRLIE +L   RGPAEA+VDAV   + +L+R
Sbjct: 218 SLQNVKRVVSEADGYQPHLIAPEQGYRRLIEGTLSYFRGPAEASVDAVHFVLKELVR 274


>IMGA|Medtr4g156910.1 Dynamin central region; Dynamin; Dynamin
           GTPase effector chr04_pseudomolecule_IMGAG_V3
           38973287-38965071 E EGN_Mt090430 20090702
          Length = 552

 Score =  361 bits (927), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 161/227 (70%), Positives = 201/227 (88%)

Query: 15  SGERTLGVLTKIDLMDKGTDAVDILEGKAYRLKFPWVGVVNRSQADINKNVDMIAARRRE 74
           SGERT GV+TK+DLMDKGT+AVD+LEG+ YRL+ PWVG+VNRSQADINKNVDMI ARR+E
Sbjct: 202 SGERTFGVVTKLDLMDKGTNAVDVLEGRQYRLQHPWVGIVNRSQADINKNVDMIVARRKE 261

Query: 75  REYFANSPEYKHLAHRMGSEHLAKMLSKHLETVIKSRIPGIQSLINKTIIELESELSRLG 134
           REYF  SPEY HLAH+MGSE+LA++LS+HLE VI+ +IP I +LINKTI EL +EL R+G
Sbjct: 262 REYFETSPEYGHLAHKMGSEYLARLLSQHLEQVIRQKIPSIIALINKTIDELNAELDRIG 321

Query: 135 KPIAADAGGKLYTIMEICRLFDQIYKEHLDGVRPGGEKIYNVFDNQLPAALKRLQFDKQL 194
           +PIA D+G +LYTI+E+CR FD+++KEHLDG RPGG++IY VFD+QLPAALK+L FD+ L
Sbjct: 322 RPIAVDSGAQLYTILEMCRAFDKVFKEHLDGGRPGGDRIYGVFDHQLPAALKKLPFDRHL 381

Query: 195 SMENIRKLIAEADGYQPHLIAPEQGYRRLIESSLITIRGPAEAAVDA 241
           S++N++K++ EADGYQPHLIAPEQGYRRLIE S+   +GPAEA+VDA
Sbjct: 382 SLKNVQKVVTEADGYQPHLIAPEQGYRRLIEGSISYFKGPAEASVDA 428


>IMGA|Medtr4g156910.2 Dynamin central region; Dynamin
           chr04_pseudomolecule_IMGAG_V3 38973287-38966205 E
           EGN_Mt090430 20090702
          Length = 511

 Score =  360 bits (925), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 161/227 (70%), Positives = 201/227 (88%)

Query: 15  SGERTLGVLTKIDLMDKGTDAVDILEGKAYRLKFPWVGVVNRSQADINKNVDMIAARRRE 74
           SGERT GV+TK+DLMDKGT+AVD+LEG+ YRL+ PWVG+VNRSQADINKNVDMI ARR+E
Sbjct: 202 SGERTFGVVTKLDLMDKGTNAVDVLEGRQYRLQHPWVGIVNRSQADINKNVDMIVARRKE 261

Query: 75  REYFANSPEYKHLAHRMGSEHLAKMLSKHLETVIKSRIPGIQSLINKTIIELESELSRLG 134
           REYF  SPEY HLAH+MGSE+LA++LS+HLE VI+ +IP I +LINKTI EL +EL R+G
Sbjct: 262 REYFETSPEYGHLAHKMGSEYLARLLSQHLEQVIRQKIPSIIALINKTIDELNAELDRIG 321

Query: 135 KPIAADAGGKLYTIMEICRLFDQIYKEHLDGVRPGGEKIYNVFDNQLPAALKRLQFDKQL 194
           +PIA D+G +LYTI+E+CR FD+++KEHLDG RPGG++IY VFD+QLPAALK+L FD+ L
Sbjct: 322 RPIAVDSGAQLYTILEMCRAFDKVFKEHLDGGRPGGDRIYGVFDHQLPAALKKLPFDRHL 381

Query: 195 SMENIRKLIAEADGYQPHLIAPEQGYRRLIESSLITIRGPAEAAVDA 241
           S++N++K++ EADGYQPHLIAPEQGYRRLIE S+   +GPAEA+VDA
Sbjct: 382 SLKNVQKVVTEADGYQPHLIAPEQGYRRLIEGSISYFKGPAEASVDA 428


>IMGA|Medtr4g121300.1 Dynamin central region; Dynamin; Dynamin
           GTPase effector chr04_pseudomolecule_IMGAG_V3
           28401923-28411225 E EGN_Mt090430 20090702
          Length = 761

 Score =  107 bits (268), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 120/229 (52%), Gaps = 9/229 (3%)

Query: 16  GERTLGVLTKIDLMDKGTDAVDILEGKAYRLKFPWVGVVNRSQADINKNVDMIAARRRER 75
           G RT+GV+TK+D+MD+GTDA ++L GK   L+  +VGVVNRSQ DI  N  +  A   E 
Sbjct: 206 GHRTIGVITKLDIMDRGTDARNLLLGKVIPLRLGYVGVVNRSQEDILTNRSIKDALVAEE 265

Query: 76  EYFANSPEYKHLAHRMGSEHLAKMLSKHLETVIKSRIPGIQSLINKTIIELESELSRLGK 135
           ++F + P Y  LA   G   LAK L+K L   IK+ +PG+++ I+ +++ L  E +  G+
Sbjct: 266 KFFRSHPIYSGLADSCGVPQLAKKLNKILAQHIKAVLPGLKARISASLVNLAKEHASYGE 325

Query: 136 PIAADA-GGKLYTIMEICRLFDQIYKEHLDGVR--------PGGEKIYNVFDNQLPAALK 186
              + A  G+   I+ I   +   +   ++G           GG +I  +F +    +L+
Sbjct: 326 ITESKACAGQGALILNILSKYSDAFTSIVEGKNEAMSTSELSGGARINYIFQSIFVRSLE 385

Query: 187 RLQFDKQLSMENIRKLIAEADGYQPHLIAPEQGYRRLIESSLITIRGPA 235
            +   + L+ ++IR  I  A G +  L  P+  +  L+   +  +  P+
Sbjct: 386 EVDPCEDLTDDDIRTAIQNATGPRAALFVPDVPFEVLVRRQISRLLDPS 434


>IMGA|Medtr4g121440.1 Dynamin central region; Dynamin; Dynamin
           GTPase effector chr04_pseudomolecule_IMGAG_V3
           28476356-28485660 E EGN_Mt090430 20090702
          Length = 766

 Score =  107 bits (268), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 120/229 (52%), Gaps = 9/229 (3%)

Query: 16  GERTLGVLTKIDLMDKGTDAVDILEGKAYRLKFPWVGVVNRSQADINKNVDMIAARRRER 75
           G RT+GV+TK+D+MD+GTDA ++L GK   L+  +VGVVNRSQ DI  N  +  A   E 
Sbjct: 206 GHRTIGVITKLDIMDRGTDARNLLLGKVIPLRLGYVGVVNRSQEDILTNRSIKDALVAEE 265

Query: 76  EYFANSPEYKHLAHRMGSEHLAKMLSKHLETVIKSRIPGIQSLINKTIIELESELSRLGK 135
           ++F + P Y  LA   G   LAK L+K L   IK+ +PG+++ I+ +++ L  E +  G+
Sbjct: 266 KFFRSHPIYSGLADSCGVPQLAKKLNKILAQHIKAVLPGLKARISASLVNLAKEHASYGE 325

Query: 136 PIAADA-GGKLYTIMEICRLFDQIYKEHLDGVR--------PGGEKIYNVFDNQLPAALK 186
              + A  G+   I+ I   +   +   ++G           GG +I  +F +    +L+
Sbjct: 326 ITESKACAGQGALILNILSKYSDAFTSIVEGKNEAMSTSELSGGARINYIFQSIFVRSLE 385

Query: 187 RLQFDKQLSMENIRKLIAEADGYQPHLIAPEQGYRRLIESSLITIRGPA 235
            +   + L+ ++IR  I  A G +  L  P+  +  L+   +  +  P+
Sbjct: 386 EVDPCEDLTDDDIRTAIQNATGPRAALFVPDVPFEVLVRRQISRLLDPS 434


>IMGA|Medtr2g009740.1 Dynamin central region; Dynamin; Dynamin
           GTPase effector chr02_pseudomolecule_IMGAG_V3
           2202134-2213835 E EGN_Mt090430 20090702
          Length = 835

 Score =  107 bits (266), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 122/238 (51%), Gaps = 18/238 (7%)

Query: 16  GERTLGVLTKIDLMDKGTDAVDILEGKAYRLKFPWVGVVNRSQADINKNVDMIAARRRER 75
           G RT+GV+TK+D+MD+GTDA ++L+GK   L+  +VGVVNRSQ DI  N  +  A   E 
Sbjct: 215 GNRTIGVITKLDIMDRGTDARNLLQGKVIPLRLGYVGVVNRSQEDIQMNRSIKDALVAEE 274

Query: 76  EYFANSPEYKHLAHRMGSEHLAKMLSKHLETVIKSRIPGIQSLINKTIIELESELSRLGK 135
           ++F + P Y  LA   G   LAK L++ L   IK+ +PG+++ I+  ++ +  E +  G+
Sbjct: 275 KFFRSRPVYSGLADSCGIPQLAKKLNQILAQHIKALLPGLRAHISTNLVTVAKEHASYGE 334

Query: 136 PIAADA----------GGKLYTIMEICRLFDQIYKEHLDGVR--------PGGEKIYNVF 177
              + A           G+   ++ I   + + +   +DG           GG +I+ +F
Sbjct: 335 ITESKACIYTGICYAYAGQGALLLNILSKYCEAFSSMVDGKNEEMSTSELSGGARIHYIF 394

Query: 178 DNQLPAALKRLQFDKQLSMENIRKLIAEADGYQPHLIAPEQGYRRLIESSLITIRGPA 235
            +    +L+ +   + L+ ++IR  I  A G +  L  PE  +  L+   +  +  P+
Sbjct: 395 QSIFVRSLEEVDPCEGLTDDDIRTAIQNATGPRSALFVPEVPFEVLVRRQISRLLDPS 452


>IMGA|Medtr4g031780.1 Dynamin central region; Dynamin; Dynamin
           GTPase effector; Pleckstrin homology-type
           chr04_pseudomolecule_IMGAG_V3 7399390-7384264 E
           EGN_Mt090430 20090702
          Length = 922

 Score =  105 bits (261), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 117/239 (48%), Gaps = 12/239 (5%)

Query: 16  GERTLGVLTKIDLM---DKGTDAVDIL---EGKAYRLKFPWVGVVNRSQADINKNVDMIA 69
           G R +GV++KID      K   AV  L   +G       PWV ++ +S +          
Sbjct: 197 GTRIVGVISKIDQAASDQKAIAAVQALLLNKGPTKAQDIPWVALIGQSVSIATAQSGSSG 256

Query: 70  ARRR-EREYFANSPEYKHL-----AHRMGSEHLAKMLSKHLETVIKSRIPGIQSLINKTI 123
           +    E  + A S   K +       ++G   L   L++ ++  +K R+P + S +    
Sbjct: 257 SENSLETAWRAESESLKSILTGAPPSKLGRIALVDALAQQIQNRMKLRVPNLLSGLQGKS 316

Query: 124 IELESELSRLGKPIAADAGGKLYTIMEICRLFDQIYKEHLDGVRPGGEKIYNVFDNQLPA 183
             ++ EL+RLG+ +   + G     +E+CR F+  + +HL      G KI   F+ + P 
Sbjct: 317 QVVQDELARLGESLVTTSEGTRAIALELCREFEDKFLQHLTSGEGTGWKIVACFEGRFPD 376

Query: 184 ALKRLQFDKQLSMENIRKLIAEADGYQPHLIAPEQGYRRLIESSLITIRGPAEAAVDAV 242
            +K+L  D+   + N+++++ EADGYQP+LI+PE+G R LI+  L   + P+   VD V
Sbjct: 377 RMKQLPLDRHFDINNVKRIVLEADGYQPYLISPEKGLRSLIKGVLELAKEPSRLCVDEV 435


>IMGA|Medtr2g009740.3 Dynamin central region; Dynamin; Dynamin
           GTPase effector chr02_pseudomolecule_IMGAG_V3
           2202134-2213835 E EGN_Mt090430 20090702
          Length = 362

 Score = 94.0 bits (232), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 49/120 (40%), Positives = 76/120 (63%)

Query: 16  GERTLGVLTKIDLMDKGTDAVDILEGKAYRLKFPWVGVVNRSQADINKNVDMIAARRRER 75
           G RT+GV+TK+D+MD+GTDA ++L+GK   L+  +VGVVNRSQ DI  N  +  A   E 
Sbjct: 215 GNRTIGVITKLDIMDRGTDARNLLQGKVIPLRLGYVGVVNRSQEDIQMNRSIKDALVAEE 274

Query: 76  EYFANSPEYKHLAHRMGSEHLAKMLSKHLETVIKSRIPGIQSLINKTIIELESELSRLGK 135
           ++F + P Y  LA   G   LAK L++ L   IK+ +PG+++ I+  ++ +  E +  G+
Sbjct: 275 KFFRSRPVYSGLADSCGIPQLAKKLNQILAQHIKALLPGLRAHISTNLVTVAKEHASYGE 334