Jatropha Genome Database
- JcCB0573121.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0573121.10 + phase: 0 /partial
(129 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr8g112560.1 TCP transcription factor chr08_pseudomolecu... 57 3e-09
IMGA|Medtr8g112220.1 TCP transcription factor chr08_pseudomolecu... 57 3e-09
IMGA|Medtr5g040550.1 TCP transcription factor chr05_pseudomolecu... 55 7e-09
IMGA|Medtr2g006520.1 TCP transcription factor chr02_pseudomolecu... 53 5e-08
IMGA|Medtr2g005910.1 TCP transcription factor chr02_pseudomolecu... 53 5e-08
IMGA|Medtr1g076470.1 TCP transcription factor chr01_pseudomolecu... 52 7e-08
IMGA|Medtr7g018180.1 TCP transcription factor chr07_pseudomolecu... 52 8e-08
IMGA|Medtr1g129720.1 TCP transcription factor chr01_pseudomolecu... 51 2e-07
IMGA|Medtr1g046410.1 TCP transcription factor chr01_pseudomolecu... 47 4e-06
IMGA|Medtr1g143870.1 TCP transcription factor chr01_pseudomolecu... 46 5e-06
IMGA|Medtr1g143660.1 TCP transcription factor chr01_pseudomolecu... 46 5e-06
>IMGA|Medtr8g112560.1 TCP transcription factor
chr08_pseudomolecule_IMGAG_V3 25298484-25296792 E
EGN_Mt090430 20090702
Length = 437
Score = 56.6 bits (135), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 4/79 (5%)
Query: 5 QLQPSSENAQSD-AKRGKPTRRRFTGDAHVPIN---KRVRVPAICVPAIFHLKKERGLRS 60
QL P+S SD A + P +R T D H + +R+R+PA+C +F L +E G +S
Sbjct: 73 QLVPASTPTTSDPANKKPPPKRTSTKDRHTKVEGRGRRIRMPALCAARVFQLTRELGHKS 132
Query: 61 DGDIIHWLIHELRPELLPA 79
DG+ I WL+ + P ++ A
Sbjct: 133 DGETIEWLLQQAEPAVIAA 151
>IMGA|Medtr8g112220.1 TCP transcription factor
chr08_pseudomolecule_IMGAG_V3 25134377-25132685 E
EGN_Mt090430 20090702
Length = 437
Score = 56.6 bits (135), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 4/79 (5%)
Query: 5 QLQPSSENAQSD-AKRGKPTRRRFTGDAHVPIN---KRVRVPAICVPAIFHLKKERGLRS 60
QL P+S SD A + P +R T D H + +R+R+PA+C +F L +E G +S
Sbjct: 73 QLVPASTPTTSDPANKKPPPKRTSTKDRHTKVEGRGRRIRMPALCAARVFQLTRELGHKS 132
Query: 61 DGDIIHWLIHELRPELLPA 79
DG+ I WL+ + P ++ A
Sbjct: 133 DGETIEWLLQQAEPAVIAA 151
>IMGA|Medtr5g040550.1 TCP transcription factor
chr05_pseudomolecule_IMGAG_V3 17311282-17309549 E
EGN_Mt090430 20090702
Length = 416
Score = 55.5 bits (132), Expect = 7e-09, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 15 SDAKRGKPTRRRFTGDAHVPIN---KRVRVPAICVPAIFHLKKERGLRSDGDIIHWLIHE 71
SD ++ P +R T D H ++ +R+R+PA C +F L +E G +SDG+ I WL+ +
Sbjct: 54 SDQQKKPPPKRASTKDRHTKVDGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLQQ 113
Query: 72 LRPELLPA 79
P ++ A
Sbjct: 114 AEPAVIAA 121
>IMGA|Medtr2g006520.1 TCP transcription factor
chr02_pseudomolecule_IMGAG_V3 680418-682650 E
EGN_Mt090430 20090702
Length = 487
Score = 52.8 bits (125), Expect = 5e-08, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 5 QLQPSSENAQSDAKRGKPTRRRFTGDAHVPIN---KRVRVPAICVPAIFHLKKERGLRSD 61
Q+QP S + + P +R T D H ++ +R+R+PA C +F L +E G +SD
Sbjct: 108 QIQPFSSTSTTVTAVANPPKRS-TKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSD 166
Query: 62 GDIIHWLIHELRPELLPA 79
G+ I WL+ + P ++ A
Sbjct: 167 GETIEWLLQQAEPAIIAA 184
>IMGA|Medtr2g005910.1 TCP transcription factor
chr02_pseudomolecule_IMGAG_V3 468226-465994 E
EGN_Mt090430 20090702
Length = 487
Score = 52.8 bits (125), Expect = 5e-08, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 5 QLQPSSENAQSDAKRGKPTRRRFTGDAHVPIN---KRVRVPAICVPAIFHLKKERGLRSD 61
Q+QP S + + P +R T D H ++ +R+R+PA C +F L +E G +SD
Sbjct: 108 QIQPFSSTSTTVTAVANPPKRS-TKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSD 166
Query: 62 GDIIHWLIHELRPELLPA 79
G+ I WL+ + P ++ A
Sbjct: 167 GETIEWLLQQAEPAIIAA 184
>IMGA|Medtr1g076470.1 TCP transcription factor
chr01_pseudomolecule_IMGAG_V3 15249568-15250185 E
EGN_Mt090430 20090702
Length = 205
Score = 52.4 bits (124), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 26 RFTGDAHVPIN---KRVRVPAICVPAIFHLKKERGLRSDGDIIHWLIHELRPELLPA 79
R T D H +N +RVR+P +C IF L +E G RSDG+ I WL+ P ++ A
Sbjct: 47 RSTKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRSDGETIEWLLRHAEPSIIAA 103
>IMGA|Medtr7g018180.1 TCP transcription factor
chr07_pseudomolecule_IMGAG_V3 4438218-4437149 E
EGN_Mt090430 20090702
Length = 284
Score = 52.0 bits (123), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 24 RRRFTGDAHVPI---NKRVRVPAICVPAIFHLKKERGLRSDGDIIHWLIHELRPELLPA 79
+R D H + +R+R+PA+C IF L +E G +SDG+ I WL+ + P ++ A
Sbjct: 46 KRTSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQSEPSIIAA 104
>IMGA|Medtr1g129720.1 TCP transcription factor
chr01_pseudomolecule_IMGAG_V3 29020377-29021876 E
EGN_Mt090430 20090702
Length = 367
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 25 RRFTGDAHVPI---NKRVRVPAICVPAIFHLKKERGLRSDGDIIHWLIHELRPELLPA 79
+R + D H + +R+R+PA C IF L +E G +SDG+ I WL+ + P ++ A
Sbjct: 91 KRSSKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLEQAEPSIIEA 148
>IMGA|Medtr1g046410.1 TCP transcription factor
chr01_pseudomolecule_IMGAG_V3 10803933-10802210 E
EGN_Mt090430 20090702
Length = 235
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 10/77 (12%)
Query: 6 LQPSSENAQSDAKRGKPTRRRFTGDAHVPIN---KRVRVPAICVPAIFHLKKERGLRSDG 62
++P+S+NA + K P++ D H ++ +R+R+P IC +F L +E G +SDG
Sbjct: 17 VEPTSQNAITVKK--PPSK-----DRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDG 69
Query: 63 DIIHWLIHELRPELLPA 79
I WL+ + P ++ A
Sbjct: 70 QTIEWLLRQAEPSIIAA 86
>IMGA|Medtr1g143870.1 TCP transcription factor
chr01_pseudomolecule_IMGAG_V3 31897379-31899293 E
EGN_Mt090430 20090702
Length = 257
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 36 NKRVRVPAICVPAIFHLKKERGLRSDGDIIHWLIHELRPELLPA 79
+R+R+P IC +F L +E G +SDG I WL+ + P ++ A
Sbjct: 44 GRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAA 87
>IMGA|Medtr1g143660.1 TCP transcription factor
chr01_pseudomolecule_IMGAG_V3 31773953-31775867 E
EGN_Mt090430 20090702
Length = 257
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 36 NKRVRVPAICVPAIFHLKKERGLRSDGDIIHWLIHELRPELLPA 79
+R+R+P IC +F L +E G +SDG I WL+ + P ++ A
Sbjct: 44 GRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAA 87