Jatropha Genome Database
- JcCB0569561.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0569561.10 + phase: 2 /partial
(75 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr1g117600.1 AUX/IAA protein chr01_pseudomolecule_IMGAG_... 149 3e-37
IMGA|Medtr5g032240.1 AUX/IAA protein chr05_pseudomolecule_IMGAG_... 124 9e-30
IMGA|Medtr4g159330.1 AUX/IAA protein chr04_pseudomolecule_IMGAG_... 122 5e-29
IMGA|Medtr8g078700.1 AUX/IAA protein chr08_pseudomolecule_IMGAG_... 121 8e-29
IMGA|Medtr5g076260.1 AUX/IAA protein chr05_pseudomolecule_IMGAG_... 121 1e-28
IMGA|Medtr2g122570.1 AUX/IAA protein chr02_pseudomolecule_IMGAG_... 114 1e-26
IMGA|Medtr1g083410.1 AUX/IAA protein chr01_pseudomolecule_IMGAG_... 93 4e-20
IMGA|Medtr1g117720.1 AUX/IAA protein chr01_pseudomolecule_IMGAG_... 88 1e-18
IMGA|AC233668_17.1 AUX/IAA protein AC233668.2 65033-67329 F EGN_... 88 1e-18
IMGA|Medtr2g123410.1 AUX/IAA protein chr02_pseudomolecule_IMGAG_... 78 1e-15
IMGA|AC233783_2.2 AUX/IAA protein AC233783.1 17994-15951 E EGN_M... 65 7e-12
IMGA|Medtr2g122050.1 AUX/IAA protein chr02_pseudomolecule_IMGAG_... 60 2e-10
IMGA|Medtr8g133620.1 AUX/IAA protein chr08_pseudomolecule_IMGAG_... 59 4e-10
IMGA|Medtr8g016050.1 AUX/IAA protein chr08_pseudomolecule_IMGAG_... 57 3e-09
IMGA|AC233668_17.2 AUX/IAA protein AC233668.2 65033-67329 F EGN_... 56 4e-09
>IMGA|Medtr1g117600.1 AUX/IAA protein chr01_pseudomolecule_IMGAG_V3
25280071-25283234 E EGN_Mt090430 20090702
Length = 236
Score = 149 bits (376), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 68/75 (90%), Positives = 72/75 (96%)
Query: 1 GSQGMKDFMNESKLIDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKGSEA 60
G+QGM DFMNESKL+DLLN SEYVPTYEDKDGDWMLVGDVPWEMF+ SCKRLRIMKGSEA
Sbjct: 162 GAQGMIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVGSCKRLRIMKGSEA 221
Query: 61 IGLAPRAVEKCKNRS 75
IGLAPRA+EKCKNRS
Sbjct: 222 IGLAPRAMEKCKNRS 236
>IMGA|Medtr5g032240.1 AUX/IAA protein chr05_pseudomolecule_IMGAG_V3
13000024-12994499 F EGN_Mt090430 20090702
Length = 335
Score = 124 bits (312), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 60/77 (77%), Positives = 69/77 (89%), Gaps = 2/77 (2%)
Query: 1 GSQGM--KDFMNESKLIDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKGS 58
GS G K+ M+ESKL DLL+GSEYV TYEDKDGDWMLVGDVPWEMFID+C+RL+IMKGS
Sbjct: 259 GSHGAPGKEMMSESKLRDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDTCRRLKIMKGS 318
Query: 59 EAIGLAPRAVEKCKNRS 75
+AIGLAPRA+EK K+RS
Sbjct: 319 DAIGLAPRAMEKSKSRS 335
>IMGA|Medtr4g159330.1 AUX/IAA protein chr04_pseudomolecule_IMGAG_V3
40172991-40176335 E EGN_Mt090430 20090702
Length = 293
Score = 122 bits (306), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 55/67 (82%), Positives = 64/67 (95%)
Query: 9 MNESKLIDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKGSEAIGLAPRAV 68
++ES+L+DLL+GSEYV TYEDKDGDWMLVGDVPWEMF +SCKRLRIMK SEAIGLAPRA+
Sbjct: 227 LSESRLVDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCKRLRIMKSSEAIGLAPRAM 286
Query: 69 EKCKNRS 75
EKCK+R+
Sbjct: 287 EKCKSRN 293
>IMGA|Medtr8g078700.1 AUX/IAA protein chr08_pseudomolecule_IMGAG_V3
16132304-16127004 E EGN_Mt090430 20090702
Length = 348
Score = 121 bits (304), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 58/77 (75%), Positives = 68/77 (88%), Gaps = 2/77 (2%)
Query: 1 GSQGM--KDFMNESKLIDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKGS 58
GS G K+ ++ESKL D L+GSEYV TYEDKDGDWMLVGDVPW+MFID+CKRL+IMKGS
Sbjct: 272 GSHGGPGKEMLSESKLKDFLHGSEYVVTYEDKDGDWMLVGDVPWDMFIDTCKRLKIMKGS 331
Query: 59 EAIGLAPRAVEKCKNRS 75
+AIGLAPRA+EK K+RS
Sbjct: 332 DAIGLAPRAMEKSKSRS 348
>IMGA|Medtr5g076260.1 AUX/IAA protein chr05_pseudomolecule_IMGAG_V3
27878822-27882652 F EGN_Mt090430 20090702
Length = 347
Score = 121 bits (303), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 55/67 (82%), Positives = 63/67 (94%)
Query: 9 MNESKLIDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKGSEAIGLAPRAV 68
+NE+KL DLL+GSEYV TYEDKDGDWMLVGDVPWEMFID+C+RLRIMK S+AIGLAPRAV
Sbjct: 281 LNETKLRDLLHGSEYVITYEDKDGDWMLVGDVPWEMFIDTCRRLRIMKSSDAIGLAPRAV 340
Query: 69 EKCKNRS 75
EK K+R+
Sbjct: 341 EKSKSRN 347
>IMGA|Medtr2g122570.1 AUX/IAA protein chr02_pseudomolecule_IMGAG_V3
29440372-29437665 F EGN_Mt090430 20090702
Length = 326
Score = 114 bits (286), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 53/70 (75%), Positives = 63/70 (90%)
Query: 6 KDFMNESKLIDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKGSEAIGLAP 65
KD ++ES L DLL+GSEYV TYEDKDGDWMLVGDVPW MF DSC+RLRIMKGS+AIGLAP
Sbjct: 257 KDGLSESSLRDLLHGSEYVLTYEDKDGDWMLVGDVPWGMFADSCRRLRIMKGSDAIGLAP 316
Query: 66 RAVEKCKNRS 75
RA+EK ++++
Sbjct: 317 RAMEKSRSQN 326
>IMGA|Medtr1g083410.1 AUX/IAA protein chr01_pseudomolecule_IMGAG_V3
16394826-16396206 E EGN_Mt090430 20090702
Length = 204
Score = 92.8 bits (229), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 41/46 (89%), Positives = 43/46 (93%)
Query: 19 NGSEYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKGSEAIGLA 64
NGSE+VPTYEDKDGDWMLVGDVPWEMF+ SCKRLRIMKGSEA GL
Sbjct: 157 NGSEFVPTYEDKDGDWMLVGDVPWEMFMSSCKRLRIMKGSEAKGLG 202
>IMGA|Medtr1g117720.1 AUX/IAA protein chr01_pseudomolecule_IMGAG_V3
25340896-25342268 F EGN_Mt090430 20090702
Length = 178
Score = 88.2 bits (217), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 38/44 (86%), Positives = 41/44 (93%)
Query: 20 GSEYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKGSEAIGL 63
GSEY PTYEDKDGDWMLVGDVPWEMF+ SCKRLRIMKG+EA G+
Sbjct: 135 GSEYEPTYEDKDGDWMLVGDVPWEMFVTSCKRLRIMKGTEARGV 178
>IMGA|AC233668_17.1 AUX/IAA protein AC233668.2 65033-67329 F
EGN_Mt090430 20090702
Length = 186
Score = 87.8 bits (216), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 38/45 (84%), Positives = 41/45 (91%)
Query: 20 GSEYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKGSEAIGLA 64
GSEY PTYEDKDGDWMLVGDVPW+MF+ SCKRLRIMKG+EA GL
Sbjct: 139 GSEYAPTYEDKDGDWMLVGDVPWDMFVTSCKRLRIMKGTEARGLG 183
>IMGA|Medtr2g123410.1 AUX/IAA protein chr02_pseudomolecule_IMGAG_V3
29935021-29936158 H EGN_Mt090430 20090702
Length = 198
Score = 78.2 bits (191), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 43/53 (81%), Gaps = 1/53 (1%)
Query: 7 DFMNESKLIDLL-NGSEYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKGS 58
D MNE K +D N +EY+ TYEDKDGDWML+GDVPW+MF++SCKR+R+M S
Sbjct: 131 DLMNEKKFMDSRKNTNEYLATYEDKDGDWMLLGDVPWKMFVESCKRIRLMISS 183
>IMGA|AC233783_2.2 AUX/IAA protein AC233783.1 17994-15951 E
EGN_Mt090430 20090702
Length = 222
Score = 65.5 bits (158), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 28/33 (84%), Positives = 32/33 (96%)
Query: 11 ESKLIDLLNGSEYVPTYEDKDGDWMLVGDVPWE 43
ES+L+DLL+GSEYV TYEDKDGDWMLVGDVPW+
Sbjct: 190 ESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWK 222
>IMGA|Medtr2g122050.1 AUX/IAA protein chr02_pseudomolecule_IMGAG_V3
29123619-29119970 E EGN_Mt090430 20090702
Length = 269
Score = 60.5 bits (145), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/50 (56%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 11 ESKLIDLLNGS-EYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKGSE 59
E + LL+GS EY YED +GD MLVGDVPW MF+ + KRLR++K +E
Sbjct: 205 EKVITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSTE 254
>IMGA|Medtr8g133620.1 AUX/IAA protein chr08_pseudomolecule_IMGAG_V3
31937442-31938620 E EGN_Mt090430 20090702
Length = 184
Score = 59.3 bits (142), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 31/36 (86%)
Query: 23 YVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKGS 58
+V TYED++GDWM+VGDVPWEMF+ S KRL+I + +
Sbjct: 147 HVLTYEDQEGDWMMVGDVPWEMFLSSVKRLKITRAN 182
>IMGA|Medtr8g016050.1 AUX/IAA protein chr08_pseudomolecule_IMGAG_V3
2999212-2995668 F EGN_Mt090430 20090702
Length = 271
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Query: 18 LNGS-EYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKGSE 59
L GS EY YED +GD MLVGDVPW MF+ + KRLR+ K S+
Sbjct: 218 LTGSGEYTLVYEDNEGDKMLVGDVPWHMFVSTVKRLRVSKSSD 260
>IMGA|AC233668_17.2 AUX/IAA protein AC233668.2 65033-67329 F
EGN_Mt090430 20090702
Length = 162
Score = 56.2 bits (134), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 23/24 (95%), Positives = 23/24 (95%)
Query: 20 GSEYVPTYEDKDGDWMLVGDVPWE 43
GSEY PTYEDKDGDWMLVGDVPWE
Sbjct: 139 GSEYAPTYEDKDGDWMLVGDVPWE 162