Jatropha Genome Database

JcCB0551271.10

BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0551271.10 - phase: 0 /partial
         (209 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g077490.2 Phosphoglycerate kinase; ; chr02_pseudomole...   106   8e-24
IMGA|Medtr2g077510.1 Phosphoglycerate kinase; ; chr02_pseudomole...   105   1e-23
IMGA|Medtr2g077490.1 Phosphoglycerate kinase; ; chr02_pseudomole...   103   4e-23
IMGA|Medtr2g077480.1 Phosphoglycerate kinase; ; chr02_pseudomole...   103   4e-23

>IMGA|Medtr2g077490.2 Phosphoglycerate kinase; ;
           chr02_pseudomolecule_IMGAG_V3 17870259-17866346 E
           EGN_Mt090430 20090702
          Length = 401

 Score =  106 bits (265), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 62/187 (33%), Positives = 95/187 (50%), Gaps = 1/187 (0%)

Query: 24  NCSKFAELLSSGVDIFVNDSFSLSHKILASTVAITRFCSACVAGFHFEESLYQMKNAVKM 83
           N  +FA+ L+S  D++VND+F  +H+  AST  + ++    VAGF  ++ L  +  AV  
Sbjct: 130 NDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVAKYLKPSVAGFLMQKELDYLVGAVSN 189

Query: 84  NKRPYIAIIGGGNLYDKAASLHLLASKCDGLVFVGIMSFQIMHALGYSVPSSLIEPQAHK 143
            K+P+ AI+GG  +  K   +  L  K D L+  G M F    A GY+V SSL+E     
Sbjct: 190 PKKPFAAIVGGSKVSSKIGVIESLLEKVDILLLGGGMIFTFYKAQGYAVGSSLVEEDKLD 249

Query: 144 AALDIIHFAQDRNIPILCPKDFWCVQGFAPKQME-VFPAHDILKGWSPVDLGPKSLDEIY 202
            A  +I  A+ + + +L P D      FA    + + PA  I  GW  +D+GP S+    
Sbjct: 250 LATTLIEKAKAKGVSLLLPTDVVIADKFAADANDKIVPASSIPDGWMGLDIGPDSIKTFN 309

Query: 203 SLLLKCK 209
             L K +
Sbjct: 310 EALDKSQ 316


>IMGA|Medtr2g077510.1 Phosphoglycerate kinase; ;
           chr02_pseudomolecule_IMGAG_V3 17878258-17873114 E
           EGN_Mt090430 20090702
          Length = 479

 Score =  105 bits (263), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 60/176 (34%), Positives = 93/176 (52%), Gaps = 1/176 (0%)

Query: 24  NCSKFAELLSSGVDIFVNDSFSLSHKILASTVAITRFCSACVAGFHFEESLYQMKNAVKM 83
           N  + A+ L++  D++VND+F  +H+  AST  +T++    VAGF  ++ L  +  AV  
Sbjct: 203 NDPEHAKKLAALADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLLQKELDYLVGAVSS 262

Query: 84  NKRPYIAIIGGGNLYDKAASLHLLASKCDGLVFVGIMSFQIMHALGYSVPSSLIEPQAHK 143
            KRP+ AI+GG  +  K   +  L  K D L+  G M F    A G +V SSL+E    +
Sbjct: 263 PKRPFAAIVGGSKVSSKIGVIESLLEKVDILLLGGGMIFTFYKAQGLAVGSSLVEEDKLE 322

Query: 144 AALDIIHFAQDRNIPILCPKDFWCVQGFAPK-QMEVFPAHDILKGWSPVDLGPKSL 198
            A  +I  A+ + + +L P D      FAP    ++ PA  I  GW  +D+GP S+
Sbjct: 323 LATTLIAKAKAKGVSLLLPSDVVIADKFAPDANSQIVPASAIPDGWMGLDIGPDSI 378


>IMGA|Medtr2g077490.1 Phosphoglycerate kinase; ;
           chr02_pseudomolecule_IMGAG_V3 17870259-17859756 E
           EGN_Mt090430 20090702
          Length = 401

 Score =  103 bits (258), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 60/187 (32%), Positives = 95/187 (50%), Gaps = 1/187 (0%)

Query: 24  NCSKFAELLSSGVDIFVNDSFSLSHKILASTVAITRFCSACVAGFHFEESLYQMKNAVKM 83
           N  +FA+ L+S  D++VND+F  +H+  AST  + ++    VAGF  ++ L  +  AV  
Sbjct: 130 NEPEFAKKLASLADLYVNDAFGTAHRAHASTEGVAKYLKPSVAGFLMQKELDYLVGAVSN 189

Query: 84  NKRPYIAIIGGGNLYDKAASLHLLASKCDGLVFVGIMSFQIMHALGYSVPSSLIEPQAHK 143
            K+P+ AI+GG  +  K   +  L  K D L+  G M +    A GYS+ SSL+E     
Sbjct: 190 PKKPFAAIVGGSKVSSKIGVIESLLEKVDILLLGGGMIYTFYKAQGYSIGSSLVEEDKLD 249

Query: 144 AALDIIHFAQDRNIPILCPKDFWCVQGF-APKQMEVFPAHDILKGWSPVDLGPKSLDEIY 202
            A  ++  A+ + + +L P D      F A    ++ PA  I  GW  +D+GP S+    
Sbjct: 250 LATSLMEKAKAKGVSLLLPTDVVIADKFSADANDKIVPASSIPDGWMGLDIGPDSIKTFN 309

Query: 203 SLLLKCK 209
             L K +
Sbjct: 310 EALDKSQ 316


>IMGA|Medtr2g077480.1 Phosphoglycerate kinase; ;
           chr02_pseudomolecule_IMGAG_V3 17863663-17859756 E
           EGN_Mt090430 20090702
          Length = 401

 Score =  103 bits (258), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 60/187 (32%), Positives = 95/187 (50%), Gaps = 1/187 (0%)

Query: 24  NCSKFAELLSSGVDIFVNDSFSLSHKILASTVAITRFCSACVAGFHFEESLYQMKNAVKM 83
           N  +FA+ L+S  D++VND+F  +H+  AST  + ++    VAGF  ++ L  +  AV  
Sbjct: 130 NEPEFAKKLASLADLYVNDAFGTAHRAHASTEGVAKYLKPSVAGFLMQKELDYLVGAVSN 189

Query: 84  NKRPYIAIIGGGNLYDKAASLHLLASKCDGLVFVGIMSFQIMHALGYSVPSSLIEPQAHK 143
            K+P+ AI+GG  +  K   +  L  K D L+  G M +    A GYS+ SSL+E     
Sbjct: 190 PKKPFAAIVGGSKVSSKIGVIESLLEKVDILLLGGGMIYTFYKAQGYSIGSSLVEEDKLD 249

Query: 144 AALDIIHFAQDRNIPILCPKDFWCVQGF-APKQMEVFPAHDILKGWSPVDLGPKSLDEIY 202
            A  ++  A+ + + +L P D      F A    ++ PA  I  GW  +D+GP S+    
Sbjct: 250 LATSLMEKAKAKGVSLLLPTDVVIADKFSADANDKIVPASSIPDGWMGLDIGPDSIKTFN 309

Query: 203 SLLLKCK 209
             L K +
Sbjct: 310 EALDKSQ 316