Jatropha Genome Database

JcCB0551261.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0551261.10 - phase: 0 
         (332 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g121440.1 Di-trans-poly-cis-decaprenylcistransferase ...   167   7e-42
IMGA|Medtr1g121110.1 Di-trans-poly-cis-decaprenylcistransferase ...   167   7e-42
IMGA|Medtr8g087990.1 Di-trans-poly-cis-decaprenylcistransferase ...   167   8e-42
IMGA|Medtr5g078680.1 Di-trans-poly-cis-decaprenylcistransferase ...   108   3e-24
IMGA|Medtr5g078710.1 Di-trans-poly-cis-decaprenylcistransferase ...    69   3e-12
IMGA|Medtr5g078690.1 Di-trans-poly-cis-decaprenylcistransferase ...    56   3e-08
IMGA|Medtr5g078720.1 Di-trans-poly-cis-decaprenylcistransferase ...    51   9e-07

>IMGA|Medtr1g121440.1 Di-trans-poly-cis-decaprenylcistransferase
           chr01_pseudomolecule_IMGAG_V3 26461750-26464002 E
           EGN_Mt090430 20090702
          Length = 360

 Score =  167 bits (423), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 81/181 (44%), Positives = 120/181 (66%), Gaps = 10/181 (5%)

Query: 6   MTKSSSRV-AELFGNLGGLLRICLFQIVSMGPIPSHFAFIMDGNRRYAKKGNLKLGAGHQ 64
           M KS+  + + L G L   LR C+F ++S GP+P+H AFIMDGNRRYA++ N+  G GH+
Sbjct: 1   MQKSAGSITSHLLGGLYCCLRRCIFAVLSAGPLPNHIAFIMDGNRRYARRRNMGEGDGHK 60

Query: 65  AGFESLISILMYCYELGVKYVTIYAFSIDNFKRRPDEVKDLMDLMLEKIDEMLKEESMAK 124
           AGF +L+S+L YCYELG+KYVT+YAFSIDNF+R+P EV+  M+LM EKI+E+L++ES+  
Sbjct: 61  AGFSALLSVLRYCYELGIKYVTVYAFSIDNFRRKPKEVQTFMELMREKIEELLQQESIIN 120

Query: 125 QYGIRVYF---------KDEVDESQATAASANCSGLIREVGGVDTENSMVMHAVHTSYED 175
           +YG+R++F            V   +A   +A+    +  +    T    ++HAV  S +D
Sbjct: 121 EYGVRLHFIGNMQLLTEPVRVAAEKAMRVTAHNQERVLLICVAYTSRDEIVHAVQESCKD 180

Query: 176 Q 176
           +
Sbjct: 181 K 181



 Score =  149 bits (375), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 75/158 (47%), Positives = 105/158 (66%), Gaps = 5/158 (3%)

Query: 124 KQYGIRVYFKDEVDESQATAASANCSGLIREVGGVDTENSMVMHAVHTSYEDQAVMANRT 183
           K+ G+ + F +  +E++  A    CS L  E  G + +++++   V    ++ +     +
Sbjct: 206 KRNGLDLNFHNSCNENETKA----CSILHEEAEGAEEKDALLEQNVKKHDDNYSEGEITS 261

Query: 184 GHGVAPIEESEK-MQGECSMIKLVDIEKYMYMAVAPEPDILVRSSGETRLSNFLLWQSSN 242
            +G   I E  K  Q + + IKLVDIEK+MYMAVAP+PDIL+R+SGE RLSNFLLWQ+S 
Sbjct: 262 CNGTVEITEERKYKQHQIASIKLVDIEKHMYMAVAPDPDILIRTSGEARLSNFLLWQTSA 321

Query: 243 CLLYSPDALWPEIGLWHLVWAILDFQRNHSYLEKKRSS 280
           C LY+P  LWPEIGL HLVWA+L+FQR+H YLEKK+  
Sbjct: 322 CPLYAPKVLWPEIGLRHLVWAVLNFQRHHFYLEKKKKQ 359


>IMGA|Medtr1g121110.1 Di-trans-poly-cis-decaprenylcistransferase
           chr01_pseudomolecule_IMGAG_V3 26316000-26314195 E
           EGN_Mt090430 20090702
          Length = 251

 Score =  167 bits (423), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 81/181 (44%), Positives = 120/181 (66%), Gaps = 10/181 (5%)

Query: 6   MTKSSSRV-AELFGNLGGLLRICLFQIVSMGPIPSHFAFIMDGNRRYAKKGNLKLGAGHQ 64
           M KS+  + + L G L   LR C+F ++S GP+P+H AFIMDGNRRYA++ N+  G GH+
Sbjct: 33  MQKSAGSITSHLLGGLYCCLRRCIFAVLSAGPLPNHIAFIMDGNRRYARRRNMGEGDGHK 92

Query: 65  AGFESLISILMYCYELGVKYVTIYAFSIDNFKRRPDEVKDLMDLMLEKIDEMLKEESMAK 124
           AGF +L+S+L YCYELG+KYVT+YAFSIDNF+R+P EV+  M+LM EKI+E+L++ES+  
Sbjct: 93  AGFSALLSVLRYCYELGIKYVTVYAFSIDNFRRKPKEVQTFMELMREKIEELLQQESIIN 152

Query: 125 QYGIRVYFKD---------EVDESQATAASANCSGLIREVGGVDTENSMVMHAVHTSYED 175
           +YG+R++F            V   +A   +A+    +  +    T    ++HAV  S +D
Sbjct: 153 EYGVRLHFIGNMQLLTEPVRVAAEKAMRVTAHNQERVLLICVAYTSRDEIVHAVQESCKD 212

Query: 176 Q 176
           +
Sbjct: 213 K 213


>IMGA|Medtr8g087990.1 Di-trans-poly-cis-decaprenylcistransferase
           chr08_pseudomolecule_IMGAG_V3 18527683-18528833 E
           EGN_Mt090430 20090702
          Length = 360

 Score =  167 bits (422), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 73/128 (57%), Positives = 101/128 (78%), Gaps = 1/128 (0%)

Query: 6   MTKSSSRV-AELFGNLGGLLRICLFQIVSMGPIPSHFAFIMDGNRRYAKKGNLKLGAGHQ 64
           M KS+  +   L G L   LR C+F ++S GP+P+H AFIMDGNRRYA++ NL  G GH+
Sbjct: 1   MQKSAGSITGHLLGGLYCCLRRCIFAVLSAGPLPNHIAFIMDGNRRYARRRNLGEGDGHK 60

Query: 65  AGFESLISILMYCYELGVKYVTIYAFSIDNFKRRPDEVKDLMDLMLEKIDEMLKEESMAK 124
           AGF +L+S+L YCYELG+KYVT+YAFSIDNF+R+P EV+  M+LM EKI+E+L++ES+  
Sbjct: 61  AGFSALLSVLRYCYELGIKYVTVYAFSIDNFRRKPKEVQTFMELMREKIEELLQQESIIN 120

Query: 125 QYGIRVYF 132
           +YG+R++F
Sbjct: 121 EYGVRLHF 128



 Score =  154 bits (388), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 77/156 (49%), Positives = 104/156 (66%), Gaps = 5/156 (3%)

Query: 124 KQYGIRVYFKDEVDESQATAASANCSGLIREVGGVDTENSMVMHAVHTSYEDQAVMANRT 183
           K+ G+  +F D   E+   A    CS L  E  G   ++++    +  S ++ +     +
Sbjct: 206 KRNGLNFHFHDPCKENGTKA----CSNLHEEGEGAGEKDALFEQNIEKSSDNCSEGEITS 261

Query: 184 GHGVAPIEESEKM-QGECSMIKLVDIEKYMYMAVAPEPDILVRSSGETRLSNFLLWQSSN 242
            +G+  I E +K  QGE + IKLVDIEK+MYM VAP+PDIL+R+SGE RLSNFLLWQ+S 
Sbjct: 262 CNGIVEITEEQKYKQGEIASIKLVDIEKHMYMTVAPDPDILIRTSGEARLSNFLLWQTSA 321

Query: 243 CLLYSPDALWPEIGLWHLVWAILDFQRNHSYLEKKR 278
           C LY+P  LWPEIGL HLVWA+L+FQR+H YLEKK+
Sbjct: 322 CPLYAPKVLWPEIGLRHLVWAVLNFQRHHFYLEKKK 357


>IMGA|Medtr5g078680.1 Di-trans-poly-cis-decaprenylcistransferase
           chr05_pseudomolecule_IMGAG_V3 29148457-29146350 E
           EGN_Mt090430 20090702
          Length = 310

 Score =  108 bits (271), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 123/242 (50%), Gaps = 18/242 (7%)

Query: 37  IPSHFAFIMDGNRRYAKKGNLKLGAGHQAGFESLISILMYCYELGVKYVTIYAFSIDNFK 96
           +P H A IMDGN R+AK   L   AGH AG +SL  ++M CY  G+K +T++AFS DN+ 
Sbjct: 78  MPKHVAVIMDGNGRWAKMRGLPASAGHVAGIKSLRRMVMLCYSWGIKVLTVFAFSTDNWI 137

Query: 97  RRPDEVKDLMDLMLEKIDEMLKEESMAKQYGIRVYFKDEVDESQATAASANCSGLIREVG 156
           R   EV+ LM L    I+  +  E++ ++ GI++    +  +   +  S   S    E  
Sbjct: 138 RPKVEVEFLMSLFERTINSEI--EALERE-GIQISVIGDTSKLPKSLKSMIASA--EEST 192

Query: 157 GVDTENSMVMHAVHTSYED--QAV--MANRTGHGVAPIEESEKMQGECSMIKLVDIEKYM 212
             + +  +++   ++   D  QA   +A +   G+  +E+  +         +++ E   
Sbjct: 193 KENPKFQLILAVSYSGKYDLVQACKSVAQKVQDGIIHLEDINE--------NIIEKELET 244

Query: 213 YMAVAPEPDILVRSSGETRLSNFLLWQSSNCLLYSPDALWPEIGLWHLVWAILDFQ-RNH 271
                P PD+L+R+SGE R+SNFLLWQ +   L+    LWP+ G    + A+  FQ R  
Sbjct: 245 NCTEFPYPDLLIRTSGELRVSNFLLWQLAYTELFFNRKLWPDFGKDEFIEALTSFQNRQR 304

Query: 272 SY 273
            Y
Sbjct: 305 RY 306


>IMGA|Medtr5g078710.1 Di-trans-poly-cis-decaprenylcistransferase
           chr05_pseudomolecule_IMGAG_V3 29154047-29152742 E
           EGN_Mt090430 20090702
          Length = 215

 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 40/104 (38%), Positives = 58/104 (55%), Gaps = 6/104 (5%)

Query: 37  IPSHFAFIMDGNRRYAKKGNLKLGAGHQAGFESLISILMYCYELGVKYVTIYAFSIDNFK 96
           IP H A IMDGN R+AK   L L  GH AG +SL +++  C    +K +TI+ FS DN+ 
Sbjct: 81  IPKHVAVIMDGNGRWAKMRGLPLSEGHTAGMQSLKTMVKMCLRWEIKVLTIFMFSTDNWI 140

Query: 97  RRPDEVKDLMDLMLEKI-----DEMLKEESMAKQYGIRVYFKDE 135
           R   EV+ L  L LE+I     + +++ E++     I V   D+
Sbjct: 141 RPKLEVEFLFSL-LERIINSETEAIMRYETLTATLFIAVTLVDK 183


>IMGA|Medtr5g078690.1 Di-trans-poly-cis-decaprenylcistransferase
           chr05_pseudomolecule_IMGAG_V3 29150574-29150149 H
           EGN_Mt090430 20090702
          Length = 141

 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 34/54 (62%)

Query: 218 PEPDILVRSSGETRLSNFLLWQSSNCLLYSPDALWPEIGLWHLVWAILDFQRNH 271
           P PD+L+R+SGE R+SNF+LWQ +   L+    LWP+ G    V A+  FQ+  
Sbjct: 81  PNPDLLIRTSGELRVSNFMLWQLAYAELFFNQKLWPDFGKDEFVEALSFFQKRQ 134


>IMGA|Medtr5g078720.1 Di-trans-poly-cis-decaprenylcistransferase
           chr05_pseudomolecule_IMGAG_V3 29165122-29164507 H
           EGN_Mt090430 20090702
          Length = 151

 Score = 50.8 bits (120), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)

Query: 218 PEPDILVRSSGETRLSNFLLWQSSNCLLYSPDALWPEIGLWHLVWAILDF-QRNHSYL 274
           P PD+L+R+ GE R+SNFLLWQ +   L+    LWP+      V A+  F QR   Y+
Sbjct: 90  PYPDLLIRTGGELRVSNFLLWQLAYTELFFNRKLWPDFEKNDFVEALSSFQQRERRYV 147