Jatropha Genome Database

JcCB0550651.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0550651.10 - phase: 0 /partial
         (91 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g065760.1 Cis-homoaconitase; ; ; chr01_pseudomolecule...   174   8e-45
IMGA|Medtr1g087350.1 Aconitate hydratase, N-terminal; ; chr01_ps...   163   2e-41
IMGA|Medtr4g062500.1 Aconitate hydratase, N-terminal; ; ; ; chr0...    49   8e-07
IMGA|Medtr2g104020.1 Aconitate hydratase, C-terminal; ; ; ; chr0...    48   1e-06
IMGA|Medtr5g022930.1 Aconitate hydratase, C-terminal; ; ; ; chr0...    45   8e-06

>IMGA|Medtr1g065760.1 Cis-homoaconitase; ; ;
           chr01_pseudomolecule_IMGAG_V3 13193763-13202569 E
           EGN_Mt090430 20090702
          Length = 508

 Score =  174 bits (442), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 83/91 (91%), Positives = 88/91 (96%)

Query: 1   VPPTLRFVMDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVESLNMEERMTLCN 60
           VPPTLRFVMDGEMP+YLLAKDLILQIIGEISVAGATYKSMEFVG+TVESLNMEERMTLCN
Sbjct: 229 VPPTLRFVMDGEMPNYLLAKDLILQIIGEISVAGATYKSMEFVGSTVESLNMEERMTLCN 288

Query: 61  MVVEAGGKNGVVPADSTTFKYLEDKTSVPYQ 91
           MVVEAGGKNGV+P DS T+KYLE KTSVPY+
Sbjct: 289 MVVEAGGKNGVIPPDSITYKYLEGKTSVPYE 319


>IMGA|Medtr1g087350.1 Aconitate hydratase, N-terminal; ;
           chr01_pseudomolecule_IMGAG_V3 17586332-17579961 H
           EGN_Mt090430 20090702
          Length = 466

 Score =  163 bits (412), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 75/91 (82%), Positives = 86/91 (94%)

Query: 1   VPPTLRFVMDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVESLNMEERMTLCN 60
           VPPT+RFV+DGEMP+YLLAKDLIL IIGEIS++GATYK+MEFVGTT+E+L MEERMTLCN
Sbjct: 207 VPPTMRFVIDGEMPNYLLAKDLILNIIGEISMSGATYKTMEFVGTTIETLTMEERMTLCN 266

Query: 61  MVVEAGGKNGVVPADSTTFKYLEDKTSVPYQ 91
           MVVEAGGKNG+V AD TT+KYLEDKTS PY+
Sbjct: 267 MVVEAGGKNGIVAADRTTYKYLEDKTSTPYE 297


>IMGA|Medtr4g062500.1 Aconitate hydratase, N-terminal; ; ; ;
           chr04_pseudomolecule_IMGAG_V3 12126814-12136100 E
           EGN_Mt090430 20090702
          Length = 1001

 Score = 48.5 bits (114), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 42/83 (50%)

Query: 1   VPPTLRFVMDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVESLNMEERMTLCN 60
           +P  + F + G + + + A DL+L +   +   G   K +EF G  +  L++ +R T+ N
Sbjct: 346 LPGVVGFKLSGNLQNGVTATDLVLTVTQILRKHGVVGKFVEFYGDGMSKLSLADRATIAN 405

Query: 61  MVVEAGGKNGVVPADSTTFKYLE 83
           M  E G   G  P D  T +YL+
Sbjct: 406 MSPEYGATMGFFPVDHVTLQYLK 428


>IMGA|Medtr2g104020.1 Aconitate hydratase, C-terminal; ; ; ;
           chr02_pseudomolecule_IMGAG_V3 24439919-24430456 E
           EGN_Mt090430 20090702
          Length = 979

 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 43/83 (51%)

Query: 1   VPPTLRFVMDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVESLNMEERMTLCN 60
           +P  + F + G++ + + A DL+L +   +   G   K +EF G  +  L++ +R T+ N
Sbjct: 324 LPGVVGFKLSGKLRNGVTATDLVLTVTQILRKHGVVGKFVEFYGNGMGELSLADRATIAN 383

Query: 61  MVVEAGGKNGVVPADSTTFKYLE 83
           M  E G   G  P D  T +YL+
Sbjct: 384 MSPEYGATMGFFPVDHVTLQYLK 406


>IMGA|Medtr5g022930.1 Aconitate hydratase, C-terminal; ; ; ;
           chr05_pseudomolecule_IMGAG_V3 8954183-8961756 F
           EGN_Mt090430 20090702
          Length = 901

 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 41/83 (49%)

Query: 1   VPPTLRFVMDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVESLNMEERMTLCN 60
           +P  + F + G++   + A DL+L +   +   G   K +EF G  +  L + +R T+ N
Sbjct: 244 LPGVVGFKLLGKLRSGVTATDLVLTVTQMLRKHGVVGKFVEFYGEGMSELPLADRATIAN 303

Query: 61  MVVEAGGKNGVVPADSTTFKYLE 83
           M  E G   G  P D  T +YL+
Sbjct: 304 MSPEYGATMGFFPVDHVTLQYLK 326