Jatropha Genome Database

JcCB0545081.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0545081.10 + phase: 0 
         (227 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g148840.1 Protein AUXIN SIGNALING F-BOX 3, related ch...   273   7e-74
IMGA|Medtr5g074580.1 Leucine-rich repeat 2 chr05_pseudomolecule_...   265   2e-71
IMGA|Medtr7g096650.1 Cyclin-like F-box chr07_pseudomolecule_IMGA...   179   1e-45
IMGA|Medtr4g124940.1 Cyclin-like F-box chr04_pseudomolecule_IMGA...   172   1e-43
IMGA|Medtr3g093160.1 Leucine-rich repeat, cysteine-containing su...   130   6e-31
IMGA|Medtr5g089200.1 Leucine-rich repeat 2 chr05_pseudomolecule_...   124   3e-29
IMGA|Medtr8g074230.1 Leucine-rich repeat, cysteine-containing su...   102   2e-22
IMGA|Medtr5g093700.1 Protein AUXIN SIGNALING F-BOX 3, putative c...    92   1e-19

>IMGA|Medtr3g148840.1 Protein AUXIN SIGNALING F-BOX 3, related
           chr03_pseudomolecule_IMGAG_V3 38779268-38775322 E
           EGN_Mt090430 20090702
          Length = 594

 Score =  273 bits (697), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 123/160 (76%), Positives = 146/160 (91%)

Query: 66  PEYQAPYPDQVLENVLENVLCFLTSRRDRNAASLVCRSWYRVEALTRSELFIGNCYAVSP 125
           PE+Q+  PD VLE VLE VL FLTSRRDRNAASLVC+SWYR EALTRS+LFIGNCY+VSP
Sbjct: 11  PEFQSENPDHVLEIVLETVLHFLTSRRDRNAASLVCKSWYRTEALTRSDLFIGNCYSVSP 70

Query: 126 QRATARFARIRSLTLKGKPRFADFNLMPPRWGAHFAPWVSSMAKAYPWLEKVHLKRMTVT 185
           +RAT+RF+RIRS+T+KGKPRFADF++MP  WGAHF+PWV++ A AYPWLEK HLKRM+VT
Sbjct: 71  RRATSRFSRIRSVTIKGKPRFADFDMMPVDWGAHFSPWVTTFAAAYPWLEKFHLKRMSVT 130

Query: 186 DDDLALLAESFLGFKELVLVCCDGFGTSGLAVVASRCRYV 225
           DDDL+LLA+SF+GFKELVLVCC+GFGT GLA VAS+CR++
Sbjct: 131 DDDLSLLADSFVGFKELVLVCCEGFGTPGLAAVASKCRFL 170


>IMGA|Medtr5g074580.1 Leucine-rich repeat 2
           chr05_pseudomolecule_IMGAG_V3 26963413-26966403 E
           EGN_Mt090430 20090702
          Length = 617

 Score =  265 bits (676), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 118/159 (74%), Positives = 142/159 (89%)

Query: 67  EYQAPYPDQVLENVLENVLCFLTSRRDRNAASLVCRSWYRVEALTRSELFIGNCYAVSPQ 126
           E  +P+PDQVLENVLENVL FLTSR+DRN+ASLVCRSWYR EALTRS+LFIGNCYA+SP+
Sbjct: 42  ENPSPFPDQVLENVLENVLHFLTSRKDRNSASLVCRSWYRAEALTRSDLFIGNCYALSPR 101

Query: 127 RATARFARIRSLTLKGKPRFADFNLMPPRWGAHFAPWVSSMAKAYPWLEKVHLKRMTVTD 186
           RA ARF+RI+S+T+KGKPRFADF+LMP  WGAHFAPW   +A+ YPWLEK+HLKRM VTD
Sbjct: 102 RAVARFSRIKSVTVKGKPRFADFDLMPVDWGAHFAPWGRELAQGYPWLEKLHLKRMNVTD 161

Query: 187 DDLALLAESFLGFKELVLVCCDGFGTSGLAVVASRCRYV 225
           DDL ++A+SF GF+EL+LVCC+GFGT GLA +AS+CR +
Sbjct: 162 DDLGVIADSFAGFRELLLVCCEGFGTPGLAAIASKCRLL 200


>IMGA|Medtr7g096650.1 Cyclin-like F-box
           chr07_pseudomolecule_IMGAG_V3 21663069-21659617 E
           EGN_Mt090430 20090702
          Length = 571

 Score =  179 bits (454), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 81/152 (53%), Positives = 110/152 (72%), Gaps = 4/152 (2%)

Query: 72  YPDQVLENVLENVLCFLTSRRDRNAASLVCRSWYRVEALTRSELFIGNCYAVSPQRATAR 131
           +PD+V+E+V +    ++ S  DRN+ SLVC+SWYR+E  TR  +FIGNCY++SP+R   R
Sbjct: 4   FPDEVIEHVFD----YVVSHSDRNSLSLVCKSWYRIERFTRQRVFIGNCYSISPERLVER 59

Query: 132 FARIRSLTLKGKPRFADFNLMPPRWGAHFAPWVSSMAKAYPWLEKVHLKRMTVTDDDLAL 191
           F  ++SLTLKGKP FADF+L+P  WG    PW+ ++AK    LE++ LKRM V+D+ L L
Sbjct: 60  FPDLKSLTLKGKPHFADFSLVPHGWGGFVYPWIEALAKNKVGLEELRLKRMVVSDESLEL 119

Query: 192 LAESFLGFKELVLVCCDGFGTSGLAVVASRCR 223
           L+ SF+ FK LVLV C+GF T GLA VA+ CR
Sbjct: 120 LSRSFVNFKSLVLVSCEGFTTDGLAAVAANCR 151


>IMGA|Medtr4g124940.1 Cyclin-like F-box
           chr04_pseudomolecule_IMGAG_V3 29352485-29348732 F
           EGN_Mt090430 20090702
          Length = 586

 Score =  172 bits (436), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 82/152 (53%), Positives = 105/152 (69%), Gaps = 4/152 (2%)

Query: 72  YPDQVLENVLENVLCFLTSRRDRNAASLVCRSWYRVEALTRSELFIGNCYAVSPQRATAR 131
           +PD+VLE VL      + SR+DR++ SLVC+ WY  E  +R  +FIGNCYAVSP+  T R
Sbjct: 24  FPDEVLERVLG----MMKSRKDRSSVSLVCKEWYNAERWSRRNVFIGNCYAVSPEILTRR 79

Query: 132 FARIRSLTLKGKPRFADFNLMPPRWGAHFAPWVSSMAKAYPWLEKVHLKRMTVTDDDLAL 191
           F  IRS+T+KGKPRF+DFNL+P  WGA    W+   A  YP+LE++ LKRM V+D+ L  
Sbjct: 80  FPNIRSVTMKGKPRFSDFNLVPANWGADIHSWLVVFADKYPFLEELRLKRMAVSDESLEF 139

Query: 192 LAESFLGFKELVLVCCDGFGTSGLAVVASRCR 223
           LA SF  FK L L+ CDGF T GLA VA+ C+
Sbjct: 140 LAFSFPNFKALSLLSCDGFSTDGLAAVATNCK 171


>IMGA|Medtr3g093160.1 Leucine-rich repeat, cysteine-containing
           subtype chr03_pseudomolecule_IMGAG_V3 22073407-22070105
           E EGN_Mt090430 20090702
          Length = 601

 Score =  130 bits (327), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 61/151 (40%), Positives = 93/151 (61%), Gaps = 1/151 (0%)

Query: 74  DQVLENVLENVLCFLTSRRDRNAASLVCRSWYRVEALTRSELFIGNCYAVSPQRATARFA 133
           +++++ VL+ V+ ++T  +DR+A S VCR W+ ++++TR  + I  CY  +P R   RF 
Sbjct: 13  NRIIDVVLDCVIPYITDPKDRDAVSQVCRRWHELDSMTRKHVTIALCYTTTPWRLRRRFP 72

Query: 134 RIRSLTLKGKPRFADFNLMPPRWGAHFAPWVSSMAKAYPWLEKVHLKRMTVTDDDLALLA 193
            + SL LKGKPR A FNL+P  WG H  PW++ +++ +  L+ +H +RM V D DL +LA
Sbjct: 73  HLESLKLKGKPRAAMFNLIPEDWGGHVTPWINEISQYFDCLKNLHFRRMIVQDSDLNILA 132

Query: 194 ES-FLGFKELVLVCCDGFGTSGLAVVASRCR 223
           ES     + L L  C GF T GL  +   CR
Sbjct: 133 ESRGHVLQSLKLEKCSGFSTKGLGYIGRFCR 163


>IMGA|Medtr5g089200.1 Leucine-rich repeat 2
           chr05_pseudomolecule_IMGAG_V3 34621888-34616774 E
           EGN_Mt090430 20090702
          Length = 587

 Score =  124 bits (312), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 61/145 (42%), Positives = 84/145 (57%), Gaps = 1/145 (0%)

Query: 80  VLENVLCFLTSRRDRNAASLVCRSWYRVEALTRSELFIGNCYAVSPQRATARFARIRSLT 139
           VL+ V+ ++   +DR+A S VCR WY +++ TR  + I  CY  +P R   RF  + SL 
Sbjct: 9   VLDCVMPYIHDPKDRDAVSQVCRRWYEIDSQTRKHVTIALCYTTTPDRLRRRFPHLESLK 68

Query: 140 LKGKPRFADFNLMPPRWGAHFAPWVSSMAKAYPWLEKVHLKRMTVTDDDLALLAES-FLG 198
           LKGKPR A FNL+P  WG    PWV  +   +  L+ +H +RM VTDDDL++LA S    
Sbjct: 69  LKGKPRAAMFNLIPENWGGFVNPWVREIENYFDCLKSLHFRRMIVTDDDLSILARSRHQS 128

Query: 199 FKELVLVCCDGFGTSGLAVVASRCR 223
              L L  C GF T GL  ++  C+
Sbjct: 129 LYSLKLEKCSGFSTHGLYHISHSCK 153


>IMGA|Medtr8g074230.1 Leucine-rich repeat, cysteine-containing
           subtype chr08_pseudomolecule_IMGAG_V3 14712347-14710032
           H EGN_Mt090430 20090702
          Length = 557

 Score =  102 bits (253), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 54/158 (34%), Positives = 81/158 (51%), Gaps = 7/158 (4%)

Query: 65  IPEYQAPYPDQVLENVLENVLCFLTSRRDRNAASLVCRSWYRVEALTRSELFIGNCYAVS 124
           +    A  PD V+E+++ N+        D    +L  R W  +++ TR  + I   YA +
Sbjct: 6   VKRINASIPDVVVEHIMHNM-------DDFELRNLFLREWRDMDSDTRKHITIPLIYAST 58

Query: 125 PQRATARFARIRSLTLKGKPRFADFNLMPPRWGAHFAPWVSSMAKAYPWLEKVHLKRMTV 184
           P++   RF +++SL LKGKPR A   ++P  WG + +PW+  +      L  +H KRM V
Sbjct: 59  PEKLKKRFPKLQSLKLKGKPRAAKCGIIPENWGGYVSPWIKVIQNYDNCLNSLHFKRMIV 118

Query: 185 TDDDLALLAESFLGFKELVLVCCDGFGTSGLAVVASRC 222
           +D DL +LAE       LVL  C GF T GL  +   C
Sbjct: 119 SDHDLLILAERGGSLFSLVLDDCSGFTTKGLEDICRSC 156


>IMGA|Medtr5g093700.1 Protein AUXIN SIGNALING F-BOX 3, putative
           chr05_pseudomolecule_IMGAG_V3 36875225-36891852 E
           EGN_Mt090430 20090702
          Length = 126

 Score = 92.4 bits (228), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 43/91 (47%), Positives = 59/91 (64%)

Query: 110 LTRSELFIGNCYAVSPQRATARFARIRSLTLKGKPRFADFNLMPPRWGAHFAPWVSSMAK 169
             R  + I N Y+VSP+R   RF  ++SLTLKGKP F DF L+P  WG    PW+ ++AK
Sbjct: 9   FIRQRVLIRNYYSVSPKRLVRRFHNLKSLTLKGKPHFNDFTLVPRDWGGFVYPWIEALAK 68

Query: 170 AYPWLEKVHLKRMTVTDDDLALLAESFLGFK 200
               LE++ LKR+ V+D+ L LL+ SF+ FK
Sbjct: 69  NKVGLEELRLKRIVVSDESLDLLSRSFVNFK 99