Jatropha Genome Database

JcCB0544731.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0544731.10 - phase: 2 /pseudo/partial
         (235 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g142640.1 Aminotransferase, class V; chr04_pseudomole...   167   5e-42
IMGA|Medtr4g142630.1 Aminotransferase, class V; chr04_pseudomole...   144   4e-35

>IMGA|Medtr4g142640.1 Aminotransferase, class V;
           chr04_pseudomolecule_IMGAG_V3 35566409-35569249 E
           EGN_Mt090430 20090702
          Length = 645

 Score =  167 bits (422), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 100/254 (39%), Positives = 137/254 (53%), Gaps = 20/254 (7%)

Query: 1   IEKQENNYIEKALERLKSNKNIWVLGKNNSKRKKETSYILLPHIFYNYXXXIFRGKRGEE 60
           IEK+E  YI KAL+RL +N NI +LG  N+KR+   S+++               +  E 
Sbjct: 393 IEKREQLYINKALKRLVTNPNIKILGNLNAKRQAILSFLIYSTTNSCSSI-DSSSQEHEG 451

Query: 61  DLNMWAETETKEIXXXXXXXXXXXXXXXXXXXXEVGVPVLVLMVIFLLNINQTTSLAIRS 120
           +LN+W E   +                        G          LLNIN++ SLAIRS
Sbjct: 452 ELNLWQEMGNQRGKPLHGPFVAALLNDLFGIQARGGCACAGPYGHELLNINKSQSLAIRS 511

Query: 121 AIQKGYVGVKPGWTRISFPYYMSEEEFEFILAAVEFIAIYGQRFLPLYHFNWKNGNWTXX 180
           A+Q+GY+GVKPGWTR+SFPYYMSE +F++IL+A+EF+A+YGQRF PLY FN +NG+WT  
Sbjct: 512 AVQEGYIGVKPGWTRVSFPYYMSESDFDYILSAIEFLAVYGQRFFPLYSFNLRNGSWTMK 571

Query: 181 XXXXXXXXXXCGGRIFN-------------------KHTSYLEMAKNIANLLPKFPSQRK 221
                         I N                   ++ +YL++AK IA+ LPKFP Q  
Sbjct: 572 TEKFEAVNKEDTCNISNHLLGKNLEEINTDVDVAVRRNQTYLDVAKYIASSLPKFPPQGI 631

Query: 222 LPEDLDHNLLXFRV 235
           L E++D N+L FRV
Sbjct: 632 LQEEMDPNILYFRV 645


>IMGA|Medtr4g142630.1 Aminotransferase, class V;
           chr04_pseudomolecule_IMGAG_V3 35557572-35563309 E
           EGN_Mt090430 20090702
          Length = 635

 Score =  144 bits (363), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 98/260 (37%), Positives = 127/260 (48%), Gaps = 42/260 (16%)

Query: 1   IEKQENNYIEKALERLKSNKNIWVLGKNNSKRKKETSYILLPHIFYNYXXXIFRGKRGEE 60
           I+++E  YI KAL++   N NI +LG  ++KR+   S+++   I            R E 
Sbjct: 393 IDRREQLYINKALKKFIPNPNIEILGNISTKRQAILSFVIYSTI-----------NRSER 441

Query: 61  DLNMWAETETKEIXXXXXXXXXXXXXXXXXXXXEVGVPVLVLMVIFLLNINQTTSLAIRS 120
                 +T+ K                        G          LLNIN++ SLA+RS
Sbjct: 442 ------KTKNKRGKIINGSFVATLLNDLFGIQSRGGCACAGPYGHDLLNINESQSLAVRS 495

Query: 121 AIQKGYVGVKPGWTRISFPYYMSEEEFEFILAAVEFIAIYGQRFLPLYHFNWKNGNWTXX 180
           AIQ+GYVGVKPGWTR+SFPYYM EEEFEFIL ++EF++IYGQRFLPLY+FN KNGNW   
Sbjct: 496 AIQEGYVGVKPGWTRVSFPYYMDEEEFEFILTSIEFVSIYGQRFLPLYNFNLKNGNWRIK 555

Query: 181 XXXXXXXXXX--C--------GGRIFNKHTSYLEM---------------AKNIANLLPK 215
                       C            F+K      +               AK IA+ LPK
Sbjct: 556 KQKLETLMKENNCYFKETKEKTNNDFSKADGEYNVRIKSVGKLRRKSFVAAKCIASRLPK 615

Query: 216 FPSQRKLPEDLDHNLLXFRV 235
           FPSQ     D+D N+L F V
Sbjct: 616 FPSQSIAYPDVDPNVLHFIV 635