Jatropha Genome Database
- JcCB0542741.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0542741.10 + phase: 0 /partial
(97 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr2g122050.1 AUX/IAA protein chr02_pseudomolecule_IMGAG_... 159 4e-40
IMGA|Medtr8g016050.1 AUX/IAA protein chr08_pseudomolecule_IMGAG_... 135 3e-33
IMGA|Medtr5g032240.1 AUX/IAA protein chr05_pseudomolecule_IMGAG_... 80 2e-16
IMGA|Medtr4g159330.1 AUX/IAA protein chr04_pseudomolecule_IMGAG_... 79 5e-16
IMGA|Medtr2g122570.1 AUX/IAA protein chr02_pseudomolecule_IMGAG_... 79 7e-16
IMGA|Medtr5g076260.1 AUX/IAA protein chr05_pseudomolecule_IMGAG_... 79 7e-16
IMGA|Medtr8g078700.1 AUX/IAA protein chr08_pseudomolecule_IMGAG_... 76 4e-15
IMGA|AC233783_2.2 AUX/IAA protein AC233783.1 17994-15951 E EGN_M... 75 8e-15
IMGA|Medtr1g117600.1 AUX/IAA protein chr01_pseudomolecule_IMGAG_... 72 7e-14
IMGA|Medtr8g133620.1 AUX/IAA protein chr08_pseudomolecule_IMGAG_... 66 4e-12
IMGA|Medtr2g123410.1 AUX/IAA protein chr02_pseudomolecule_IMGAG_... 66 5e-12
IMGA|AC233668_17.2 AUX/IAA protein AC233668.2 65033-67329 F EGN_... 62 5e-11
IMGA|AC233668_17.1 AUX/IAA protein AC233668.2 65033-67329 F EGN_... 62 8e-11
IMGA|Medtr1g117720.1 AUX/IAA protein chr01_pseudomolecule_IMGAG_... 62 8e-11
IMGA|Medtr1g083410.1 AUX/IAA protein chr01_pseudomolecule_IMGAG_... 61 1e-10
IMGA|Medtr7g134180.1 AUX/IAA protein chr07_pseudomolecule_IMGAG_... 60 3e-10
IMGA|Medtr4g152210.1 AUX/IAA protein; Transcriptional factor B3;... 55 9e-09
IMGA|Medtr4g019570.1 AUX/IAA protein; Transcriptional factor B3;... 52 6e-08
IMGA|Medtr2g005100.1 AUX/IAA protein; Transcriptional factor B3;... 52 9e-08
IMGA|Medtr3g137460.1 AUX/IAA protein chr03_pseudomolecule_IMGAG_... 47 2e-06
>IMGA|Medtr2g122050.1 AUX/IAA protein chr02_pseudomolecule_IMGAG_V3
29123619-29119970 E EGN_Mt090430 20090702
Length = 269
Score = 159 bits (401), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 78/96 (81%), Positives = 84/96 (87%), Gaps = 1/96 (1%)
Query: 3 NCKKGMFVKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSA-GGIMSKQ 61
N KG+FVKINMDGVPIGRKVDL AY SY+ LS+AVD+LFRGLL AQRDSSA GG K+
Sbjct: 143 NYGKGLFVKINMDGVPIGRKVDLNAYHSYDNLSSAVDDLFRGLLKAQRDSSACGGNNKKE 202
Query: 62 EEEKAITGVLDGSGEYTLVYEDNEGDRMLVGDVPWQ 97
EEEK ITG+LDGSGEYTLVYEDNEGDRMLVGDVPW
Sbjct: 203 EEEKVITGLLDGSGEYTLVYEDNEGDRMLVGDVPWH 238
>IMGA|Medtr8g016050.1 AUX/IAA protein chr08_pseudomolecule_IMGAG_V3
2999212-2995668 F EGN_Mt090430 20090702
Length = 271
Score = 135 bits (341), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 68/98 (69%), Positives = 79/98 (80%), Gaps = 3/98 (3%)
Query: 1 MENCKKGMFVKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSK 60
+ N KG+FVKINMDGVPIGRK+D+ AYDSYEKLS+AVD+LFRGLL + + + GI K
Sbjct: 149 ISNSGKGLFVKINMDGVPIGRKIDINAYDSYEKLSSAVDDLFRGLL--EEINLSHGINKK 206
Query: 61 QEEE-KAITGVLDGSGEYTLVYEDNEGDRMLVGDVPWQ 97
QEEE + G L GSGEYTLVYEDNEGD+MLVGDVPW
Sbjct: 207 QEEEDTGMKGSLTGSGEYTLVYEDNEGDKMLVGDVPWH 244
>IMGA|Medtr5g032240.1 AUX/IAA protein chr05_pseudomolecule_IMGAG_V3
13000024-12994499 F EGN_Mt090430 20090702
Length = 335
Score = 80.5 bits (197), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
Query: 7 GMFVKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQEEEKA 66
+FVK++MDG P RKVDL+ Y +Y++LS+A++++F Q S G + E
Sbjct: 215 ALFVKVSMDGAPYLRKVDLRTYATYQQLSSALEKMFSCFTLGQ-CGSHGAPGKEMMSESK 273
Query: 67 ITGVLDGSGEYTLVYEDNEGDRMLVGDVPWQ 97
+ +L GS EY L YED +GD MLVGDVPW+
Sbjct: 274 LRDLLHGS-EYVLTYEDKDGDWMLVGDVPWE 303
>IMGA|Medtr4g159330.1 AUX/IAA protein chr04_pseudomolecule_IMGAG_V3
40172991-40176335 E EGN_Mt090430 20090702
Length = 293
Score = 79.3 bits (194), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 8 MFVKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQEEEKAI 67
++VK++M+G P RKVDL + SY +LS+A++++F +Q S K E +
Sbjct: 173 LYVKVSMEGAPYLRKVDLNGFSSYRELSSALEKMFSCFTISQCGSYGVSCREKNLSESRL 232
Query: 68 TGVLDGSGEYTLVYEDNEGDRMLVGDVPWQ 97
+L GS EY L YED +GD MLVGDVPW+
Sbjct: 233 VDLLHGS-EYVLTYEDKDGDWMLVGDVPWE 261
>IMGA|Medtr2g122570.1 AUX/IAA protein chr02_pseudomolecule_IMGAG_V3
29440372-29437665 F EGN_Mt090430 20090702
Length = 326
Score = 78.6 bits (192), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 60/90 (66%), Gaps = 4/90 (4%)
Query: 8 MFVKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQE-EEKA 66
++VK++MDG P RKVDLK Y++Y +LS+A++++F Q +S G+ K E +
Sbjct: 207 LYVKVSMDGAPYLRKVDLKTYNNYMELSSALEKMFTCFTIGQCNSP--GLPGKDGLSESS 264
Query: 67 ITGVLDGSGEYTLVYEDNEGDRMLVGDVPW 96
+ +L GS EY L YED +GD MLVGDVPW
Sbjct: 265 LRDLLHGS-EYVLTYEDKDGDWMLVGDVPW 293
>IMGA|Medtr5g076260.1 AUX/IAA protein chr05_pseudomolecule_IMGAG_V3
27878822-27882652 F EGN_Mt090430 20090702
Length = 347
Score = 78.6 bits (192), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 59/91 (64%), Gaps = 5/91 (5%)
Query: 7 GMFVKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQEEEKA 66
+FVK++MDG P RKVDLK Y +Y +LS++++++F Q +S +++ E
Sbjct: 230 AVFVKVSMDGAPYLRKVDLKNYTAYSELSSSLEKMFSCFTIGQCESHGNQMLN----ETK 285
Query: 67 ITGVLDGSGEYTLVYEDNEGDRMLVGDVPWQ 97
+ +L GS EY + YED +GD MLVGDVPW+
Sbjct: 286 LRDLLHGS-EYVITYEDKDGDWMLVGDVPWE 315
>IMGA|Medtr8g078700.1 AUX/IAA protein chr08_pseudomolecule_IMGAG_V3
16132304-16127004 E EGN_Mt090430 20090702
Length = 348
Score = 76.3 bits (186), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
Query: 7 GMFVKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQEEEKA 66
+FVK++MDG P RKVDL+ Y +Y++LS+ ++++F Q S GG + E
Sbjct: 228 ALFVKVSMDGAPYLRKVDLRNYTTYQELSSDLEKMFSCFTLGQC-GSHGGPGKEMLSESK 286
Query: 67 ITGVLDGSGEYTLVYEDNEGDRMLVGDVPW 96
+ L GS EY + YED +GD MLVGDVPW
Sbjct: 287 LKDFLHGS-EYVVTYEDKDGDWMLVGDVPW 315
>IMGA|AC233783_2.2 AUX/IAA protein AC233783.1 17994-15951 E
EGN_Mt090430 20090702
Length = 222
Score = 75.1 bits (183), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 58/90 (64%), Gaps = 2/90 (2%)
Query: 8 MFVKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQEEEKAI 67
++VK++MDG P RKVDLK + +Y++LS+A++++F +Q S G E +
Sbjct: 135 LYVKVSMDGAPYLRKVDLKIFGTYKELSSALEKMFSCFTISQF-GSHGVFGQGNVCESRL 193
Query: 68 TGVLDGSGEYTLVYEDNEGDRMLVGDVPWQ 97
+L GS EY L YED +GD MLVGDVPW+
Sbjct: 194 MDLLHGS-EYVLTYEDKDGDWMLVGDVPWK 222
>IMGA|Medtr1g117600.1 AUX/IAA protein chr01_pseudomolecule_IMGAG_V3
25280071-25283234 E EGN_Mt090430 20090702
Length = 236
Score = 72.0 bits (175), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Query: 3 NCKKGMFVKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQE 62
N FVK++MDG P RKVDL Y +Y+ LS A+ ++F + A G++
Sbjct: 114 NTTAAAFVKVSMDGAPYLRKVDLTMYKTYKDLSDALAKMFSSFTTG--NYGAQGMIDFMN 171
Query: 63 EEKAITGVLDGSGEYTLVYEDNEGDRMLVGDVPWQ 97
E K + L S EY YED +GD MLVGDVPW+
Sbjct: 172 ESKLMD--LLNSSEYVPTYEDKDGDWMLVGDVPWE 204
>IMGA|Medtr8g133620.1 AUX/IAA protein chr08_pseudomolecule_IMGAG_V3
31937442-31938620 E EGN_Mt090430 20090702
Length = 184
Score = 66.2 bits (160), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 17/93 (18%)
Query: 5 KKGMFVKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQEEE 64
+ +FVK+ M+G+PIGRK++L + SY+ L A+ +FR +
Sbjct: 92 RPSLFVKVYMEGIPIGRKLNLLEHHSYDGLIKALCHMFRTTILCPNSQP----------- 140
Query: 65 KAITGVLDGSGEYTLVYEDNEGDRMLVGDVPWQ 97
L+ + L YED EGD M+VGDVPW+
Sbjct: 141 ------LNSWNFHVLTYEDQEGDWMMVGDVPWE 167
>IMGA|Medtr2g123410.1 AUX/IAA protein chr02_pseudomolecule_IMGAG_V3
29935021-29936158 H EGN_Mt090430 20090702
Length = 198
Score = 65.9 bits (159), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 11/94 (11%)
Query: 4 CKKGMFVKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQEE 63
CK +VK+ +DG P RKVDL+ Y+ Y+ L TA++ +F ++ I +
Sbjct: 86 CK---YVKVAVDGAPYLRKVDLEVYECYDNLLTALNTMF--------STNCFTIRNDLMN 134
Query: 64 EKAITGVLDGSGEYTLVYEDNEGDRMLVGDVPWQ 97
EK + EY YED +GD ML+GDVPW+
Sbjct: 135 EKKFMDSRKNTNEYLATYEDKDGDWMLLGDVPWK 168
>IMGA|AC233668_17.2 AUX/IAA protein AC233668.2 65033-67329 F
EGN_Mt090430 20090702
Length = 162
Score = 62.4 bits (150), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 17/91 (18%)
Query: 7 GMFVKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQEEEKA 66
G++VK++MDG P RK+DL+ Y Y +L A++ +F+ + G S++E K
Sbjct: 89 GIYVKVSMDGAPYLRKIDLRIYGGYPELLKALETMFKLTI---------GEYSEREGYKG 139
Query: 67 ITGVLDGSGEYTLVYEDNEGDRMLVGDVPWQ 97
EY YED +GD MLVGDVPW+
Sbjct: 140 --------SEYAPTYEDKDGDWMLVGDVPWE 162
>IMGA|AC233668_17.1 AUX/IAA protein AC233668.2 65033-67329 F
EGN_Mt090430 20090702
Length = 186
Score = 62.0 bits (149), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 17/90 (18%)
Query: 7 GMFVKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQEEEKA 66
G++VK++MDG P RK+DL+ Y Y +L A++ +F+ + G S++E K
Sbjct: 89 GIYVKVSMDGAPYLRKIDLRIYGGYPELLKALETMFKLTI---------GEYSEREGYKG 139
Query: 67 ITGVLDGSGEYTLVYEDNEGDRMLVGDVPW 96
EY YED +GD MLVGDVPW
Sbjct: 140 --------SEYAPTYEDKDGDWMLVGDVPW 161
>IMGA|Medtr1g117720.1 AUX/IAA protein chr01_pseudomolecule_IMGAG_V3
25340896-25342268 F EGN_Mt090430 20090702
Length = 178
Score = 61.6 bits (148), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 17/91 (18%)
Query: 7 GMFVKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQEEEKA 66
G++VK+++DG P RK+DL+ Y Y +L A++ +F+ + G S++E K
Sbjct: 85 GIYVKVSLDGAPYLRKIDLRVYGGYAQLLKALESMFKLTI---------GNYSEKEGYKG 135
Query: 67 ITGVLDGSGEYTLVYEDNEGDRMLVGDVPWQ 97
EY YED +GD MLVGDVPW+
Sbjct: 136 --------SEYEPTYEDKDGDWMLVGDVPWE 158
>IMGA|Medtr1g083410.1 AUX/IAA protein chr01_pseudomolecule_IMGAG_V3
16394826-16396206 E EGN_Mt090430 20090702
Length = 204
Score = 61.2 bits (147), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 17/91 (18%)
Query: 7 GMFVKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQEEEKA 66
GM++K++M G P RK+DLK Y SY +L ++ +F+ + + E +
Sbjct: 108 GMYLKVSMAGAPYLRKIDLKVYKSYSELLKVLENMFKCTIG------------EYSEREG 155
Query: 67 ITGVLDGSGEYTLVYEDNEGDRMLVGDVPWQ 97
G E+ YED +GD MLVGDVPW+
Sbjct: 156 YNG-----SEFVPTYEDKDGDWMLVGDVPWE 181
>IMGA|Medtr7g134180.1 AUX/IAA protein chr07_pseudomolecule_IMGAG_V3
31614665-31613933 E EGN_Mt090430 20090702
Length = 142
Score = 59.7 bits (143), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 16/92 (17%)
Query: 6 KGMFVKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQEEEK 65
++VK+ M+G+PIGRK+++ A+ SY +L ++ +F + G M + E+
Sbjct: 67 NSLYVKVYMEGIPIGRKLNILAHQSYHELVKTLEHMFDTTIL------WGNEMDGVQPER 120
Query: 66 AITGVLDGSGEYTLVYEDNEGDRMLVGDVPWQ 97
+ L YED EGD ++VGDVPW+
Sbjct: 121 C----------HVLTYEDEEGDLVMVGDVPWE 142
>IMGA|Medtr4g152210.1 AUX/IAA protein; Transcriptional factor B3;
Auxin response factor chr04_pseudomolecule_IMGAG_V3
37661517-37656640 E EGN_Mt090430 20090702
Length = 821
Score = 55.1 bits (131), Expect = 9e-09, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 28/90 (31%)
Query: 11 KINMDGVPIGRKVDLKAYDSYEKLSTAVDELF--RG-LLAAQRDSSAGGIMSKQEEEKAI 67
K++ G+ +GR VDL + Y++L+ +D+LF RG L++ Q+D
Sbjct: 702 KVHKKGIALGRSVDLTKFSDYDELTAELDQLFEFRGELISPQKD---------------- 745
Query: 68 TGVLDGSGEYTLVYEDNEGDRMLVGDVPWQ 97
+ +V+ DNEGD MLVGD PWQ
Sbjct: 746 ---------WLVVFTDNEGDMMLVGDDPWQ 766
>IMGA|Medtr4g019570.1 AUX/IAA protein; Transcriptional factor B3;
Auxin response factor chr04_pseudomolecule_IMGAG_V3
4019217-4014242 E EGN_Mt090430 20090702
Length = 666
Score = 52.4 bits (124), Expect = 6e-08, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 23/86 (26%)
Query: 11 KINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQEEEKAITGV 70
K+ M GV +GR VDL + Y++L ++ELF I G
Sbjct: 558 KVQMQGVAVGRAVDLATLNGYDQLIGELEELFD-----------------------IKGQ 594
Query: 71 LDGSGEYTLVYEDNEGDRMLVGDVPW 96
L + +V+ D+EGD MLVGD PW
Sbjct: 595 LQHRNTWEIVFTDDEGDMMLVGDDPW 620
>IMGA|Medtr2g005100.1 AUX/IAA protein; Transcriptional factor B3;
Auxin response factor chr02_pseudomolecule_IMGAG_V3
92528-103456 E EGN_Mt090430 20090702
Length = 670
Score = 51.6 bits (122), Expect = 9e-08, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 24/87 (27%)
Query: 11 KINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQEEEKAITGV 70
K++M G+ +GR VDL +D YE L ++E+F I G
Sbjct: 550 KVHMQGMAVGRAVDLTRFDGYEDLLRKLEEMFD-----------------------IEGE 586
Query: 71 LDG-SGEYTLVYEDNEGDRMLVGDVPW 96
L G + ++ +VY DNE D M+VGD PW
Sbjct: 587 LCGATKKWLVVYTDNEDDMMMVGDDPW 613
>IMGA|Medtr3g137460.1 AUX/IAA protein chr03_pseudomolecule_IMGAG_V3
34861254-34858528 E EGN_Mt090430 20090702
Length = 213
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 22/92 (23%)
Query: 6 KGMFVKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQEEEK 65
K ++VK+NM+GV +GR+++L+ Y+SY+ L ++ +F + Q G
Sbjct: 124 KPLYVKVNMEGVGMGRQINLRLYNSYQTLKDSLISMF---VKCQNFEETG---------- 170
Query: 66 AITGVLDGSGEYTLVYEDNEGDRMLVGDVPWQ 97
YTL +++ +G+ L + WQ
Sbjct: 171 ---------ANYTLTFQNKQGEWKLTSHITWQ 193