Jatropha Genome Database

JcCB0537911.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0537911.10 + phase: 0 /partial
         (166 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g122020.1 Aminotransferase, class I and II; ; chr04_p...   287   1e-78
IMGA|Medtr2g008560.1 Aminotransferase, class I and II; ; chr02_p...   233   4e-62

>IMGA|Medtr4g122020.1 Aminotransferase, class I and II; ;
           chr04_pseudomolecule_IMGAG_V3 28801431-28796116 E
           EGN_Mt090430 20090702
          Length = 459

 Score =  287 bits (735), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 133/166 (80%), Positives = 147/166 (88%)

Query: 1   VAIETASFSKYAGFTGVRLGWTVVPKELLFSDGFPVAKDFNRIVCTCFNGASNVVQAGGL 60
           VAIET+SFSKYAGFTGVRLGWTV+PK+LLFSDGFPVAKDFNRIVCTCFNGASN+ QAGGL
Sbjct: 294 VAIETSSFSKYAGFTGVRLGWTVIPKQLLFSDGFPVAKDFNRIVCTCFNGASNISQAGGL 353

Query: 61  ACLSPEGRNAMQKVVGFYKENADIIMDTFNSLGFNVYGGVNAPYVWVHFPGRSSWDVFSE 120
           ACLSPEG  AM+ V+GFYKEN +II+DTF+SLGF VYGG +APYVWVHFPG++SWDVFSE
Sbjct: 354 ACLSPEGLKAMRGVIGFYKENTNIIVDTFDSLGFKVYGGKSAPYVWVHFPGQNSWDVFSE 413

Query: 121 ILEKTHVVTTXXXXXXXXXXXXIRVSAFGHRENILEACRRFKQLYK 166
           ILEKTHVVTT            +RVSAFGHREN+LEACRRFKQLYK
Sbjct: 414 ILEKTHVVTTPGSGFGPGGEGFVRVSAFGHRENVLEACRRFKQLYK 459


>IMGA|Medtr2g008560.1 Aminotransferase, class I and II; ;
           chr02_pseudomolecule_IMGAG_V3 1650708-1654241 E
           EGN_Mt090430 20090702
          Length = 440

 Score =  233 bits (593), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 108/164 (65%), Positives = 126/164 (76%)

Query: 1   VAIETASFSKYAGFTGVRLGWTVVPKELLFSDGFPVAKDFNRIVCTCFNGASNVVQAGGL 60
           VAIE +SFSK+AGFTGVRLGWTVVP+ELL+S+GFPV  DFNRIVCTCFNGASN+ QAGGL
Sbjct: 275 VAIEVSSFSKFAGFTGVRLGWTVVPEELLYSNGFPVLHDFNRIVCTCFNGASNISQAGGL 334

Query: 61  ACLSPEGRNAMQKVVGFYKENADIIMDTFNSLGFNVYGGVNAPYVWVHFPGRSSWDVFSE 120
           ACLSPEG NA+Q +V +Y ENA I++    SLG  VYGG NAPYVWV FPG  SWDVF+E
Sbjct: 335 ACLSPEGLNAVQSLVDYYMENARILVTALTSLGLTVYGGKNAPYVWVRFPGSKSWDVFAE 394

Query: 121 ILEKTHVVTTXXXXXXXXXXXXIRVSAFGHRENILEACRRFKQL 164
           ILE TH++T             IR+SAFG R++I+EA  R K L
Sbjct: 395 ILENTHIITIPGSGFGPGGEGYIRISAFGQRDSIIEASERLKYL 438