Jatropha Genome Database

JcCB0507301.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0507301.10 - phase: 0 /partial
         (221 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g111900.1 Fatty acid desaturase chr07_pseudomolecule_...   373   e-104
IMGA|AC233577_39.1 Fatty acid desaturase AC233577.5 182710-18086...   236   6e-63
IMGA|Medtr5g079460.1 Fatty acid desaturase chr05_pseudomolecule_...   123   8e-29
IMGA|Medtr4g013060.1 Fatty acid desaturase chr04_pseudomolecule_...   108   3e-24
IMGA|Medtr8g145530.1 Fatty acid desaturase chr08_pseudomolecule_...    70   1e-12

>IMGA|Medtr7g111900.1 Fatty acid desaturase
           chr07_pseudomolecule_IMGAG_V3 26389378-26394723 E
           EGN_Mt090430 20090702
          Length = 392

 Score =  373 bits (957), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 172/222 (77%), Positives = 200/222 (90%), Gaps = 1/222 (0%)

Query: 1   MGAGGRMSVPPSPKKLEAEVLKRVPYSKPPFTLGQVKKAIPPHCFQRSVLRSFSYVVYDL 60
           MGAGGR SVPPS +K E + +KRVP+ KPPF+L Q+KKAIPPHCF+RSV+ SFSYVVYDL
Sbjct: 9   MGAGGRTSVPPSARKSENDTVKRVPFEKPPFSLSQIKKAIPPHCFKRSVIHSFSYVVYDL 68

Query: 61  TLAFIFYYVATNYFHLLPQPLSYVAWPIYWSLQGCVLTGIWVIAHECGHHAFSDYQWLDD 120
           T+AF  YYVAT+YF  LP+PLS++AWP YW++QGC+LTG+WVIAHECGHHAFSDYQWLDD
Sbjct: 69  TIAFFLYYVATHYFQHLPRPLSFLAWPAYWAIQGCILTGVWVIAHECGHHAFSDYQWLDD 128

Query: 121 IVGLLLHSCLLVPYFSWKHSHRRHHSNTGSLERDEVFVPKKKSNIRWFSKYLNNLP-GRL 179
            VGL+LHS LLVPYFSWK+SHRRHHSNTGSLERDEVFVPK+KS+I W+SKYL+N P GR+
Sbjct: 129 TVGLILHSALLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSSIYWYSKYLSNNPLGRV 188

Query: 180 FTLTITLALGWPLYLAFNVSGRHYDRFACHFDPYGPIYNDRE 221
            T+TITL LGWPLYLA NVSGR YDRFACHF+P+GPIY+DRE
Sbjct: 189 LTITITLTLGWPLYLALNVSGRPYDRFACHFNPHGPIYSDRE 230


>IMGA|AC233577_39.1 Fatty acid desaturase AC233577.5 182710-180865 E
           EGN_Mt090430 20090702
          Length = 343

 Score =  236 bits (602), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 120/201 (59%), Positives = 146/201 (72%), Gaps = 20/201 (9%)

Query: 21  LKRVPYSKPPFTLGQVKKAIPPHCFQRSVLRSFSYVVYDLTLAFIFYYVATNYFHLLPQP 80
           + +VP++KPPFT+GQ+KK+IPPHCF+RS+L SFSYVV+DL++A++ Y ++T YFH  P P
Sbjct: 1   MNKVPHTKPPFTVGQLKKSIPPHCFERSILLSFSYVVFDLSIAYVLY-ISTTYFHSFPHP 59

Query: 81  LSYVAWPIYWSLQGCVLTGIWVIAHECGHHAFSDYQWLDDIVGLLLHSCLLVPYFSWKHS 140
             ++ WP+YW LQ                         DD+VG +LH+ LLVPYFSWK S
Sbjct: 60  FPFILWPVYWLLQVTT-------------------NGFDDLVGFILHTSLLVPYFSWKIS 100

Query: 141 HRRHHSNTGSLERDEVFVPKKKSNIRWFSKYLNNLPGRLFTLTITLALGWPLYLAFNVSG 200
           HRRHHSNT SLERDEVFVPK KSN+ W+SKYLNN  GR  TL ITL LGWPLYLAFNV G
Sbjct: 101 HRRHHSNTASLERDEVFVPKPKSNVGWYSKYLNNPLGRALTLLITLTLGWPLYLAFNVFG 160

Query: 201 RHYDRFACHFDPYGPIYNDRE 221
           R YDRFA H+ PY PIY+ RE
Sbjct: 161 RPYDRFASHYHPYAPIYSKRE 181


>IMGA|Medtr5g079460.1 Fatty acid desaturase
           chr05_pseudomolecule_IMGAG_V3 29627982-29625700 E
           EGN_Mt090430 20090702
          Length = 391

 Score =  123 bits (308), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 68/198 (34%), Positives = 108/198 (54%), Gaps = 17/198 (8%)

Query: 25  PYSKPPFTLGQVKKAIPPHCFQRSVLRSFSYVVYDLTLAFIFYYVATNYFHLLPQPLSYV 84
           P + PPF +  ++ AIP HC+ ++  RS SYV+ D+ +       A  +        ++ 
Sbjct: 38  PSAPPPFKIADIRAAIPKHCWVKNTWRSLSYVLRDVVVVTALIVAAIRF-------DNWY 90

Query: 85  AWPIYWSLQGCVLTGIWVIAHECGHHAFSDYQWLDDIVGLLLHSCLLVPYFSWKHSHRRH 144
            WPIYW LQG +   I+V+ H+CGH +FSD   +++ VG +LHS +LVPY  W+ SH+ H
Sbjct: 91  FWPIYWPLQGTMFWAIFVLGHDCGHGSFSDSSLVNNFVGHILHSSILVPYHGWRISHKTH 150

Query: 145 HSNTGSLERDEVFVPKKKSNIRWFSKYLNNLPGRLFTLTITLAL-GWPLYLAFNVSGRHY 203
           H N G++ERDE +VP  +         L+N+  +    ++ L L  +P+YL     G+  
Sbjct: 151 HQNHGNVERDESWVPLTEK----VYNSLDNM-TKFVRFSVPLPLFAYPIYLWSRSPGKS- 204

Query: 204 DRFACHFDPYGPIYNDRE 221
                HF PY  +++  E
Sbjct: 205 ---GSHFHPYSDLFSPNE 219


>IMGA|Medtr4g013060.1 Fatty acid desaturase
           chr04_pseudomolecule_IMGAG_V3 2464310-2468599 E
           EGN_Mt090430 20090702
          Length = 440

 Score =  108 bits (269), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 70/199 (35%), Positives = 104/199 (52%), Gaps = 17/199 (8%)

Query: 25  PYSKPPFTLGQVKKAIPPHCFQRSVLRSFSYVVYDLTLAFIFYYVATNYFHLLPQPLSYV 84
           P + PPFTLG ++ AIP HC+ +   +S SYVV    +      V   Y +      S  
Sbjct: 86  PGAPPPFTLGDIRAAIPKHCWVKDPWKSMSYVVR-DVVVVFGLAVVAAYVN------SLF 138

Query: 85  AWPIYWSLQGCVLTGIWVIAHECGHHAFSDYQWLDDIVGLLLHSCLLVPYFSWKHSHRRH 144
            WP+YW+ QG +   ++V+ H+CGH +FS+   L+ + G LLHS +LVPY  W+ SHR H
Sbjct: 139 VWPLYWAAQGTMFWALFVLGHDCGHGSFSNNPKLNSVAGHLLHSSILVPYHGWRISHRTH 198

Query: 145 HSNTGSLERDEVFVPKKKSNIRWFSKYLNNLPGRLFTLTITLALGWPLYLAFNVSGRHYD 204
           H N G +E DE + P  +   + F    N+     FT+   + L +P YL     G+   
Sbjct: 199 HQNHGHVENDESWHPLPE---KIFRSLDNSTKMLRFTIPFPM-LAYPFYLWSRSPGKK-- 252

Query: 205 RFACHFDPYGPIY--NDRE 221
               HFDP   ++  N+R+
Sbjct: 253 --GSHFDPNSDLFVPNERK 269


>IMGA|Medtr8g145530.1 Fatty acid desaturase
           chr08_pseudomolecule_IMGAG_V3 35397649-35391594 E
           EGN_Mt090430 20090702
          Length = 446

 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 78/158 (49%), Gaps = 7/158 (4%)

Query: 7   MSVPPSPKKLEAEVLKRVPYSKPPFTLGQVKKAIPPHCFQRSVLRSFSYVVYDL--TLAF 64
           +++P  P  +E+   ++    +  +   Q+ + +P +   + V+ S    V+++    A+
Sbjct: 69  VAIPVEPAPVESAEYRKQLAER--YGFEQIGEPLPDNVTLKDVITSLPKKVFEIDDVKAW 126

Query: 65  IFYYVATNYFHLLPQPLSYVAW---PIYWSLQGCVLTGIWVIAHECGHHAFSDYQWLDDI 121
               ++   + L    +S   W   P+ W+  G  +TG +VI H+C H +FS  + ++DI
Sbjct: 127 KSVLISATSYALGLLMISKAPWYLLPLAWAWTGTAVTGFFVIGHDCAHKSFSTNKLVEDI 186

Query: 122 VGLLLHSCLLVPYFSWKHSHRRHHSNTGSLERDEVFVP 159
           VG L    L+ PY  W+  H +HH+ T  L+ D  + P
Sbjct: 187 VGTLAFLPLIYPYEPWRFKHDKHHAKTNMLKEDTAWQP 224