Jatropha Genome Database

JcCB0498421.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0498421.10 - phase: 0 /partial
         (96 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g163530.1 Major intrinsic protein chr03_pseudomolecul...   162   4e-41
IMGA|Medtr4g081730.2 Major intrinsic protein chr04_pseudomolecul...   147   2e-36
IMGA|Medtr4g081730.1 Aquaporin chr04_pseudomolecule_IMGAG_V3 171...   146   3e-36
IMGA|Medtr7g121470.1 Major intrinsic protein chr07_pseudomolecul...   145   6e-36
IMGA|Medtr2g110380.1 Major intrinsic protein chr02_pseudomolecul...   138   6e-34
IMGA|Medtr5g010260.1 Major intrinsic protein chr05_pseudomolecul...   119   4e-28
IMGA|Medtr3g093260.2 Major intrinsic protein chr03_pseudomolecul...   118   8e-28
IMGA|Medtr3g093260.1 Major intrinsic protein chr03_pseudomolecul...   117   2e-27
IMGA|Medtr5g089400.1 Major intrinsic protein chr05_pseudomolecul...   116   3e-27
IMGA|Medtr1g120820.1 Major intrinsic protein chr01_pseudomolecul...   113   3e-26

>IMGA|Medtr3g163530.1 Major intrinsic protein
          chr03_pseudomolecule_IMGAG_V3 42984188-42985232 E
          EGN_Mt090430 20090702
          Length = 279

 Score =  162 bits (410), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 78/96 (81%), Positives = 84/96 (87%), Gaps = 1/96 (1%)

Query: 1  MAKEVSEETQTTHAKDYVDPPPAPLIDMAEIKLWSFYRALIAEFIATLLFLYITVATVIG 60
          M+KE        H KDYVDPPPAPL+D AEIKLWSFYRALIAEFIATLLFLY+TVATVIG
Sbjct: 1  MSKEEGHPPHP-HGKDYVDPPPAPLLDFAEIKLWSFYRALIAEFIATLLFLYVTVATVIG 59

Query: 61 YKKQTDPCGGVGLLGIAWAFGGMIFILVYCTAGISG 96
          +KKQT PC GVGLLGIAW+FGGMIF+LVYCTAGISG
Sbjct: 60 HKKQTAPCDGVGLLGIAWSFGGMIFVLVYCTAGISG 95


>IMGA|Medtr4g081730.2 Major intrinsic protein
           chr04_pseudomolecule_IMGAG_V3 17168162-17169180 F
           EGN_Mt090430 20090702
          Length = 204

 Score =  147 bits (370), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 73/103 (70%), Positives = 83/103 (80%), Gaps = 7/103 (6%)

Query: 1   MAKEVSEETQTTH-AKDYVDPPPAPLIDMAEIKLWSFYRALIAEFIATLLFLYITVATVI 59
           MAK+V  + Q  + AKDY DPPPAPLID+ E+  WSFYRALIAEF+ATLLFLY+TV T+I
Sbjct: 1   MAKDVEVQEQGEYSAKDYQDPPPAPLIDVEELTKWSFYRALIAEFVATLLFLYVTVLTII 60

Query: 60  GYKKQTDP------CGGVGLLGIAWAFGGMIFILVYCTAGISG 96
           GY  Q+DP      C GVG+LGIAWAFGGMIFILVYCTAGISG
Sbjct: 61  GYSHQSDPKAGGTDCDGVGILGIAWAFGGMIFILVYCTAGISG 103


>IMGA|Medtr4g081730.1 Aquaporin chr04_pseudomolecule_IMGAG_V3
           17168162-17170205 F EGN_Mt090430 20090702
          Length = 285

 Score =  146 bits (368), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 73/103 (70%), Positives = 83/103 (80%), Gaps = 7/103 (6%)

Query: 1   MAKEVSEETQTTH-AKDYVDPPPAPLIDMAEIKLWSFYRALIAEFIATLLFLYITVATVI 59
           MAK+V  + Q  + AKDY DPPPAPLID+ E+  WSFYRALIAEF+ATLLFLY+TV T+I
Sbjct: 1   MAKDVEVQEQGEYSAKDYQDPPPAPLIDVEELTKWSFYRALIAEFVATLLFLYVTVLTII 60

Query: 60  GYKKQTDP------CGGVGLLGIAWAFGGMIFILVYCTAGISG 96
           GY  Q+DP      C GVG+LGIAWAFGGMIFILVYCTAGISG
Sbjct: 61  GYSHQSDPKAGGTDCDGVGILGIAWAFGGMIFILVYCTAGISG 103


>IMGA|Medtr7g121470.1 Major intrinsic protein
           chr07_pseudomolecule_IMGAG_V3 28607970-28606378 F
           EGN_Mt090430 20090702
          Length = 287

 Score =  145 bits (365), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 73/103 (70%), Positives = 80/103 (77%), Gaps = 7/103 (6%)

Query: 1   MAKEVSEETQT-THAKDYVDPPPAPLIDMAEIKLWSFYRALIAEFIATLLFLYITVATVI 59
           MAK++  E Q     KDY DPPPAPL D AE+  WSFYRALIAEF+ATLLFLY+TV TVI
Sbjct: 1   MAKDIEAEPQGGVPHKDYHDPPPAPLFDTAELGQWSFYRALIAEFVATLLFLYVTVLTVI 60

Query: 60  GYKKQTDP------CGGVGLLGIAWAFGGMIFILVYCTAGISG 96
           GY  QTDP      C GVG+LGIAWAFGGMIF+LVYCTAGISG
Sbjct: 61  GYNAQTDPAHNGTNCDGVGILGIAWAFGGMIFVLVYCTAGISG 103


>IMGA|Medtr2g110380.1 Major intrinsic protein
           chr02_pseudomolecule_IMGAG_V3 25921484-25924019 E
           EGN_Mt090430 20090702
          Length = 287

 Score =  138 bits (348), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 68/100 (68%), Positives = 77/100 (77%), Gaps = 7/100 (7%)

Query: 4   EVSEETQTTHAKDYVDPPPAPLIDMAEIKLWSFYRALIAEFIATLLFLYITVATVIGYKK 63
           EV E+     AKDY DPPPAPL D+ E+  WS YRA+IAEF+ATLLFLYITV T+IGY +
Sbjct: 6   EVQEQGGEFSAKDYQDPPPAPLFDLDELTKWSLYRAVIAEFVATLLFLYITVLTIIGYSR 65

Query: 64  QTD-------PCGGVGLLGIAWAFGGMIFILVYCTAGISG 96
           Q+D        C GVG+LGIAWAFGGMIFILVYCTAGISG
Sbjct: 66  QSDTTIKGNTECDGVGVLGIAWAFGGMIFILVYCTAGISG 105


>IMGA|Medtr5g010260.1 Major intrinsic protein
           chr05_pseudomolecule_IMGAG_V3 2476585-2474824 F
           EGN_Mt090430 20090702
          Length = 287

 Score =  119 bits (298), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 59/100 (59%), Positives = 70/100 (70%), Gaps = 5/100 (5%)

Query: 2   AKEVSEETQ-----TTHAKDYVDPPPAPLIDMAEIKLWSFYRALIAEFIATLLFLYITVA 56
           A + SE+        + +KDY + PPAPL +  E+K WSFYRA IAEF+AT LFLYITV 
Sbjct: 11  ANKFSEKNALGTGAQSDSKDYKEAPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITVL 70

Query: 57  TVIGYKKQTDPCGGVGLLGIAWAFGGMIFILVYCTAGISG 96
           TV+G  +    C  VG+ GIAWAFGGMIF LVYCTAGISG
Sbjct: 71  TVMGVNRSPSKCASVGIQGIAWAFGGMIFALVYCTAGISG 110


>IMGA|Medtr3g093260.2 Major intrinsic protein
           chr03_pseudomolecule_IMGAG_V3 22124617-22122477 F
           EGN_Mt090430 20090702
          Length = 215

 Score =  118 bits (295), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 54/83 (65%), Positives = 64/83 (77%)

Query: 14  AKDYVDPPPAPLIDMAEIKLWSFYRALIAEFIATLLFLYITVATVIGYKKQTDPCGGVGL 73
            KDY +PPPAPL + +E+  WSFYRA IAEF+AT LFLYIT+ TV+G  +    C  VG+
Sbjct: 31  GKDYKEPPPAPLFEPSELTSWSFYRAGIAEFVATFLFLYITILTVMGVNRSESKCKTVGI 90

Query: 74  LGIAWAFGGMIFILVYCTAGISG 96
            GIAW+FGGMIF LVYCTAGISG
Sbjct: 91  QGIAWSFGGMIFALVYCTAGISG 113


>IMGA|Medtr3g093260.1 Major intrinsic protein
           chr03_pseudomolecule_IMGAG_V3 22124617-22122477 F
           EGN_Mt090430 20090702
          Length = 290

 Score =  117 bits (293), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 54/82 (65%), Positives = 64/82 (78%)

Query: 15  KDYVDPPPAPLIDMAEIKLWSFYRALIAEFIATLLFLYITVATVIGYKKQTDPCGGVGLL 74
           KDY +PPPAPL + +E+  WSFYRA IAEF+AT LFLYIT+ TV+G  +    C  VG+ 
Sbjct: 32  KDYKEPPPAPLFEPSELTSWSFYRAGIAEFVATFLFLYITILTVMGVNRSESKCKTVGIQ 91

Query: 75  GIAWAFGGMIFILVYCTAGISG 96
           GIAW+FGGMIF LVYCTAGISG
Sbjct: 92  GIAWSFGGMIFALVYCTAGISG 113


>IMGA|Medtr5g089400.1 Major intrinsic protein
           chr05_pseudomolecule_IMGAG_V3 34754573-34752386 E
           EGN_Mt090430 20090702
          Length = 289

 Score =  116 bits (290), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 56/82 (68%), Positives = 64/82 (78%)

Query: 15  KDYVDPPPAPLIDMAEIKLWSFYRALIAEFIATLLFLYITVATVIGYKKQTDPCGGVGLL 74
           KDY +PPPAPL + +E+  WSFYRA IAEF+AT LFLYITV TV+G  +    C  VG+ 
Sbjct: 32  KDYQEPPPAPLFEPSELTSWSFYRAGIAEFVATFLFLYITVLTVMGVVRADSKCKTVGIQ 91

Query: 75  GIAWAFGGMIFILVYCTAGISG 96
           GIAWAFGGMIF LVYCTAGISG
Sbjct: 92  GIAWAFGGMIFALVYCTAGISG 113


>IMGA|Medtr1g120820.1 Major intrinsic protein
          chr01_pseudomolecule_IMGAG_V3 26133532-26129937 E
          EGN_Mt090430 20090702
          Length = 290

 Score =  113 bits (282), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 60/88 (68%), Positives = 65/88 (73%), Gaps = 7/88 (7%)

Query: 1  MAKEVS-EETQTTHAKDYVDPPPAPLIDMAEIKLWSFYRALIAEFIATLLFLYITVATVI 59
          MAK+V   E  +   KDY DPPPAPLID  E+  WSFYRALIAEFIATLLFLY+TV TVI
Sbjct: 1  MAKDVEVAERGSFSNKDYHDPPPAPLIDAEELTKWSFYRALIAEFIATLLFLYVTVLTVI 60

Query: 60 GYKKQT------DPCGGVGLLGIAWAFG 81
          GY  QT      D CGGVG+LGIAWAFG
Sbjct: 61 GYSIQTDVKAGGDACGGVGILGIAWAFG 88