Jatropha Genome Database

JcCB0495181.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0495181.10 - phase: 0 
         (190 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g132820.1 Bacterial transketolase chr02_pseudomolecul...   194   3e-50
IMGA|Medtr1g146450.1 Bacterial transketolase chr01_pseudomolecul...   194   3e-50
IMGA|Medtr5g064820.1 Bacterial transketolase chr05_pseudomolecul...   194   3e-50
IMGA|Medtr4g025540.1 Bacterial transketolase chr04_pseudomolecul...   186   5e-48

>IMGA|Medtr2g132820.1 Bacterial transketolase
           chr02_pseudomolecule_IMGAG_V3 32363120-32367088 E
           EGN_Mt090430 20090702
          Length = 735

 Score =  194 bits (493), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 88/96 (91%), Positives = 92/96 (95%)

Query: 76  ASVVETVDATTETSLVEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHILYDEVMKYN 135
           A+ VET+D TTE SLVEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHILYDEVM+YN
Sbjct: 60  ATAVETLDKTTEASLVEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHILYDEVMRYN 119

Query: 136 PKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVK 171
           PKNP WFNRDRFVLSAGHGCMLQYALLHLAGYDSV+
Sbjct: 120 PKNPSWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQ 155


>IMGA|Medtr1g146450.1 Bacterial transketolase
           chr01_pseudomolecule_IMGAG_V3 32373189-32377149 E
           EGN_Mt090430 20090702
          Length = 735

 Score =  194 bits (493), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 88/96 (91%), Positives = 92/96 (95%)

Query: 76  ASVVETVDATTETSLVEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHILYDEVMKYN 135
           A+ VET+D TTE SLVEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHILYDEVM+YN
Sbjct: 60  ATAVETLDKTTEASLVEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHILYDEVMRYN 119

Query: 136 PKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVK 171
           PKNP WFNRDRFVLSAGHGCMLQYALLHLAGYDSV+
Sbjct: 120 PKNPSWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQ 155


>IMGA|Medtr5g064820.1 Bacterial transketolase
           chr05_pseudomolecule_IMGAG_V3 22539663-22543631 E
           EGN_Mt090430 20090702
          Length = 735

 Score =  194 bits (493), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 88/96 (91%), Positives = 92/96 (95%)

Query: 76  ASVVETVDATTETSLVEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHILYDEVMKYN 135
           A+ VET+D TTE SLVEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHILYDEVM+YN
Sbjct: 60  ATAVETLDKTTEASLVEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHILYDEVMRYN 119

Query: 136 PKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVK 171
           PKNP WFNRDRFVLSAGHGCMLQYALLHLAGYDSV+
Sbjct: 120 PKNPSWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQ 155


>IMGA|Medtr4g025540.1 Bacterial transketolase
           chr04_pseudomolecule_IMGAG_V3 6118682-6113814 E
           EGN_Mt090430 20090702
          Length = 735

 Score =  186 bits (473), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 84/97 (86%), Positives = 91/97 (93%)

Query: 76  ASVVETVDATTETSLVEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHILYDEVMKYN 135
           ASV      TT++SLVEKSVNTIRFLA+D+VEKANSGHPGLPMGCAPMGH+LYDEVM+YN
Sbjct: 60  ASVSAPPSTTTDSSLVEKSVNTIRFLAVDSVEKANSGHPGLPMGCAPMGHVLYDEVMRYN 119

Query: 136 PKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVKV 172
           PKNP+WFNRDRFVLSAGHGCMLQYALLHLAGYDSVKV
Sbjct: 120 PKNPFWFNRDRFVLSAGHGCMLQYALLHLAGYDSVKV 156