Jatropha Genome Database

JcCB0480731.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0480731.10 - phase: 0 /partial
         (100 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g097000.1 Glycosyl transferase, family 29 chr07_pseud...   192   5e-50
IMGA|Medtr4g152010.1 Glycosyl transferase, family 29 chr04_pseud...   109   4e-25
IMGA|Medtr4g152010.2 Glycosyl transferase, family 29 chr04_pseud...   108   4e-25

>IMGA|Medtr7g097000.1 Glycosyl transferase, family 29
           chr07_pseudomolecule_IMGAG_V3 21855178-21848531 E
           EGN_Mt090430 20090702
          Length = 476

 Score =  192 bits (487), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 91/100 (91%), Positives = 97/100 (97%)

Query: 1   KYAKHVGLKRDFRLVVRGAARNMVTILNGSTDEVLIIKSVTHRDFNAMIKSIPNPVYLFQ 60
           KYAK+VGLKRDFRLVVRGAARNMV ILNGS DEVLIIKS+THR+ NA+IK++PNPVYLFQ
Sbjct: 220 KYAKYVGLKRDFRLVVRGAARNMVPILNGSDDEVLIIKSLTHREINAVIKTLPNPVYLFQ 279

Query: 61  GIVLRRGAKGTGMKSIELALSMCDIVDIYGFTVDPGYTEW 100
           GIVLRRGAKGTGMKSIELALSMCDIVDIYGFTVDPGYTEW
Sbjct: 280 GIVLRRGAKGTGMKSIELALSMCDIVDIYGFTVDPGYTEW 319


>IMGA|Medtr4g152010.1 Glycosyl transferase, family 29
           chr04_pseudomolecule_IMGAG_V3 37561920-37557293 E
           EGN_Mt090430 20090702
          Length = 443

 Score =  109 bits (272), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 55/103 (53%), Positives = 69/103 (66%), Gaps = 4/103 (3%)

Query: 2   YAKHVGLKRDFRLVVRGAARNM--VTILNGSTDEVLIIKSVTHRDFNAMIKSIP--NPVY 57
           Y ++VG K  FRL+ RG+A+ +  V  L+    EVLI+K+  H   N MIK +P  NPVY
Sbjct: 212 YTEYVGRKSTFRLLNRGSAKALDKVVELDEQRKEVLIVKTTIHDIMNKMIKELPIRNPVY 271

Query: 58  LFQGIVLRRGAKGTGMKSIELALSMCDIVDIYGFTVDPGYTEW 100
           L  G      AKGTG+K++E ALSMCD VD+YGFTVDPGY EW
Sbjct: 272 LMLGASFGSAAKGTGLKALEFALSMCDSVDMYGFTVDPGYKEW 314


>IMGA|Medtr4g152010.2 Glycosyl transferase, family 29
           chr04_pseudomolecule_IMGAG_V3 37561920-37557293 E
           EGN_Mt090430 20090702
          Length = 288

 Score =  108 bits (271), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 55/103 (53%), Positives = 69/103 (66%), Gaps = 4/103 (3%)

Query: 2   YAKHVGLKRDFRLVVRGAARNM--VTILNGSTDEVLIIKSVTHRDFNAMIKSIP--NPVY 57
           Y ++VG K  FRL+ RG+A+ +  V  L+    EVLI+K+  H   N MIK +P  NPVY
Sbjct: 57  YTEYVGRKSTFRLLNRGSAKALDKVVELDEQRKEVLIVKTTIHDIMNKMIKELPIRNPVY 116

Query: 58  LFQGIVLRRGAKGTGMKSIELALSMCDIVDIYGFTVDPGYTEW 100
           L  G      AKGTG+K++E ALSMCD VD+YGFTVDPGY EW
Sbjct: 117 LMLGASFGSAAKGTGLKALEFALSMCDSVDMYGFTVDPGYKEW 159