Jatropha Genome Database

JcCB0470521.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0470521.10 + phase: 0 
         (86 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g098540.1 Ras GTPase chr04_pseudomolecule_IMGAG_V3 21...   125   4e-30
IMGA|Medtr8g089410.1 Ras GTPase chr08_pseudomolecule_IMGAG_V3 19...   111   7e-26
IMGA|Medtr5g022500.1 Ras GTPase chr05_pseudomolecule_IMGAG_V3 87...   107   1e-24
IMGA|Medtr2g132410.1 Ras GTPase chr02_pseudomolecule_IMGAG_V3 32...    96   3e-21
IMGA|Medtr6g099230.1 Ras small GTPase, Rab type chr06_pseudomole...    95   1e-20

>IMGA|Medtr4g098540.1 Ras GTPase chr04_pseudomolecule_IMGAG_V3
           21246015-21242846 F EGN_Mt090430 20090702
          Length = 197

 Score =  125 bits (315), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 60/77 (77%), Positives = 64/77 (83%)

Query: 10  NLRDDDQFFIDHPGAAPITTAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIKVVLQP 69
           +LRDD QFF DHPGAAPITTAQGEELRKLIGAP YIECSSKTQ+NVK VFD+AIKVVLQP
Sbjct: 121 DLRDDSQFFQDHPGAAPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVFDSAIKVVLQP 180

Query: 70  PXXXXXXXXGQTSCSIL 86
           P        GQ +CSIL
Sbjct: 181 PKQKKTKRKGQKACSIL 197


>IMGA|Medtr8g089410.1 Ras GTPase chr08_pseudomolecule_IMGAG_V3
           19209541-19213679 F EGN_Mt090430 20090702
          Length = 197

 Score =  111 bits (278), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 58/77 (75%), Positives = 63/77 (81%)

Query: 10  NLRDDDQFFIDHPGAAPITTAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIKVVLQP 69
           +LRDD QFF+DHPGA PITTAQGEELRKLI APAYIECSSK+QQNVK VFDAAI+VVLQP
Sbjct: 121 DLRDDKQFFVDHPGAVPITTAQGEELRKLINAPAYIECSSKSQQNVKAVFDAAIRVVLQP 180

Query: 70  PXXXXXXXXGQTSCSIL 86
           P         Q +CSIL
Sbjct: 181 PKQKKKKSKAQKACSIL 197


>IMGA|Medtr5g022500.1 Ras GTPase chr05_pseudomolecule_IMGAG_V3
           8775550-8778414 E EGN_Mt090430 20090702
          Length = 197

 Score =  107 bits (267), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 57/77 (74%), Positives = 62/77 (80%)

Query: 10  NLRDDDQFFIDHPGAAPITTAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIKVVLQP 69
           +LRDD QF IDHPGA PITTAQGEELRKLI APAYIECSSK+Q+NVK VFDAAI+VVLQP
Sbjct: 121 DLRDDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKSQENVKAVFDAAIRVVLQP 180

Query: 70  PXXXXXXXXGQTSCSIL 86
           P         Q +CSIL
Sbjct: 181 PKQKKKKNKAQKACSIL 197


>IMGA|Medtr2g132410.1 Ras GTPase chr02_pseudomolecule_IMGAG_V3
           32003647-32002013 E EGN_Mt090430 20090702
          Length = 196

 Score = 96.3 bits (238), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 44/58 (75%), Positives = 50/58 (86%)

Query: 10  NLRDDDQFFIDHPGAAPITTAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIKVVL 67
           +LR+D Q+ IDHPGA  ITTAQGEEL++ IGA  Y+ECSSKTQQNVK VFDAAIKVVL
Sbjct: 121 DLREDRQYLIDHPGATAITTAQGEELKRAIGAAVYLECSSKTQQNVKAVFDAAIKVVL 178


>IMGA|Medtr6g099230.1 Ras small GTPase, Rab type
           chr06_pseudomolecule_IMGAG_V3 21851607-21855202 F
           EGN_Mt090430 20090702
          Length = 209

 Score = 94.7 bits (234), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 45/61 (73%), Positives = 50/61 (81%)

Query: 10  NLRDDDQFFIDHPGAAPITTAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIKVVLQP 69
           +LR+D  +F DH G   IT+A+GEELRK IGA AYIECSSKTQQNVK VFD AIKVVLQP
Sbjct: 121 DLREDRGYFADHTGYNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQP 180

Query: 70  P 70
           P
Sbjct: 181 P 181