Jatropha Genome Database

JcCB0468081.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0468081.10 - phase: 0 /pseudo
         (428 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g024730.1 Glycoside hydrolase, family 47 chr02_pseudo...   557   e-159
IMGA|Medtr2g024730.2 Glycoside hydrolase, family 47 chr02_pseudo...   554   e-158
IMGA|Medtr8g129800.1 Glycoside hydrolase, family 47 chr08_pseudo...   162   4e-40
IMGA|Medtr8g125210.1 Glycoside hydrolase, family 47 chr08_pseudo...   100   1e-21

>IMGA|Medtr2g024730.1 Glycoside hydrolase, family 47
           chr02_pseudomolecule_IMGAG_V3 6358264-6364041 F
           EGN_Mt090430 20090702
          Length = 631

 Score =  557 bits (1436), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 276/384 (71%), Positives = 311/384 (80%), Gaps = 3/384 (0%)

Query: 1   MIFGLAYLVLTH-PSTPHSFSDGLAKGIKGSEEDKLITDGNSRLGRFWRKXXXXXXXXXX 59
           +IFG+ YLVLTH PS     S     GI+ +E D     G  RL +FWR+          
Sbjct: 54  LIFGVTYLVLTHTPSPGRVVSRDQVFGIQNNETDNSSNSGAGRLKKFWRRAPRLPPQLPP 113

Query: 60  DEKVRNNKPIHESEKLNADPKWTERQQKVKDAFIHAWSGYKNYAMGYDELMPLSKRGVDG 119
           D KV NN   H    L+    W  RQQKVK+AF HAWSGYK YAMGYDELMP+S+ G DG
Sbjct: 114 DTKVSNNN--HVPATLDDKSLWITRQQKVKEAFTHAWSGYKKYAMGYDELMPVSQHGTDG 171

Query: 120 LGGLGATVVDALDTAMIMGADDIVSEAGSWIEKHLNDRISKKGQVNLFETTIRVLGGLLS 179
           LGGLGATVVDALDTAMIMG D++V+EAG W+E+HL++RISKKGQVNLFETTIRVLGGLLS
Sbjct: 172 LGGLGATVVDALDTAMIMGIDEVVAEAGLWVEEHLSERISKKGQVNLFETTIRVLGGLLS 231

Query: 180 AYHLSGGEQGTDSVHKGPKPIVYLETARNLADRLLLAFTSSPTPIPFSDVVLHDPSAHSS 239
           AYHLSGGEQGT+  H GPKP VYLETA+NL DRLL AFTSSPTPIPFSDVVLHD SAH++
Sbjct: 232 AYHLSGGEQGTNVTHAGPKPSVYLETAKNLGDRLLSAFTSSPTPIPFSDVVLHDSSAHNA 291

Query: 240 PDGLSSTSEVSTLQLEFNYLSTVSGDPKYGVEAMKVLAHMKNLPKVEGLVPIYISPASGE 299
           P GLSSTSEVSTLQLEFNYLS VSGD KYG+EAMKV+ H+K LPKVEGLVPIYISP SG+
Sbjct: 292 PGGLSSTSEVSTLQLEFNYLSAVSGDQKYGLEAMKVMEHIKTLPKVEGLVPIYISPDSGQ 351

Query: 300 FSGENIRLGSRGDSYYEYLIKVWLQQGTSRDANFTYLYNMYEEAIKGVRNLLVQKSIPNG 359
           FSGENIRLGSRGDSYYEYL+KVWLQ GTSRD+N +YLY MY+EA+ GVR+LLV+K++PNG
Sbjct: 352 FSGENIRLGSRGDSYYEYLLKVWLQSGTSRDSNSSYLYEMYKEAMTGVRHLLVKKTVPNG 411

Query: 360 LVFVGELPNGPKGSFSPKMDHLVC 383
           LVFVGELP+G  G FSPKMDHLVC
Sbjct: 412 LVFVGELPSGSNGGFSPKMDHLVC 435


>IMGA|Medtr2g024730.2 Glycoside hydrolase, family 47
           chr02_pseudomolecule_IMGAG_V3 6358264-6361128 F
           EGN_Mt090430 20090702
          Length = 438

 Score =  554 bits (1428), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 276/386 (71%), Positives = 311/386 (80%), Gaps = 3/386 (0%)

Query: 1   MIFGLAYLVLTH-PSTPHSFSDGLAKGIKGSEEDKLITDGNSRLGRFWRKXXXXXXXXXX 59
           +IFG+ YLVLTH PS     S     GI+ +E D     G  RL +FWR+          
Sbjct: 54  LIFGVTYLVLTHTPSPGRVVSRDQVFGIQNNETDNSSNSGAGRLKKFWRRAPRLPPQLPP 113

Query: 60  DEKVRNNKPIHESEKLNADPKWTERQQKVKDAFIHAWSGYKNYAMGYDELMPLSKRGVDG 119
           D KV NN   H    L+    W  RQQKVK+AF HAWSGYK YAMGYDELMP+S+ G DG
Sbjct: 114 DTKVSNNN--HVPATLDDKSLWITRQQKVKEAFTHAWSGYKKYAMGYDELMPVSQHGTDG 171

Query: 120 LGGLGATVVDALDTAMIMGADDIVSEAGSWIEKHLNDRISKKGQVNLFETTIRVLGGLLS 179
           LGGLGATVVDALDTAMIMG D++V+EAG W+E+HL++RISKKGQVNLFETTIRVLGGLLS
Sbjct: 172 LGGLGATVVDALDTAMIMGIDEVVAEAGLWVEEHLSERISKKGQVNLFETTIRVLGGLLS 231

Query: 180 AYHLSGGEQGTDSVHKGPKPIVYLETARNLADRLLLAFTSSPTPIPFSDVVLHDPSAHSS 239
           AYHLSGGEQGT+  H GPKP VYLETA+NL DRLL AFTSSPTPIPFSDVVLHD SAH++
Sbjct: 232 AYHLSGGEQGTNVTHAGPKPSVYLETAKNLGDRLLSAFTSSPTPIPFSDVVLHDSSAHNA 291

Query: 240 PDGLSSTSEVSTLQLEFNYLSTVSGDPKYGVEAMKVLAHMKNLPKVEGLVPIYISPASGE 299
           P GLSSTSEVSTLQLEFNYLS VSGD KYG+EAMKV+ H+K LPKVEGLVPIYISP SG+
Sbjct: 292 PGGLSSTSEVSTLQLEFNYLSAVSGDQKYGLEAMKVMEHIKTLPKVEGLVPIYISPDSGQ 351

Query: 300 FSGENIRLGSRGDSYYEYLIKVWLQQGTSRDANFTYLYNMYEEAIKGVRNLLVQKSIPNG 359
           FSGENIRLGSRGDSYYEYL+KVWLQ GTSRD+N +YLY MY+EA+ GVR+LLV+K++PNG
Sbjct: 352 FSGENIRLGSRGDSYYEYLLKVWLQSGTSRDSNSSYLYEMYKEAMTGVRHLLVKKTVPNG 411

Query: 360 LVFVGELPNGPKGSFSPKMDHLVCEI 385
           LVFVGELP+G  G FSPKMDHLV  I
Sbjct: 412 LVFVGELPSGSNGGFSPKMDHLVGYI 437


>IMGA|Medtr8g129800.1 Glycoside hydrolase, family 47
           chr08_pseudomolecule_IMGAG_V3 30799019-30801438 H
           EGN_Mt090430 20090702
          Length = 214

 Score =  162 bits (409), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 100/224 (44%), Positives = 135/224 (60%), Gaps = 26/224 (11%)

Query: 116 GVDGLGGLGATVVDALDTAMIMGADDIVSEAGSWIEKHLNDRISKKGQVNLFETTIRVLG 175
           GVD  GGLGAT+VD+LDT  IMG D     A  WIEK L    +K  +V++FETTIRVLG
Sbjct: 3   GVDSFGGLGATLVDSLDTLFIMGLDTQFKRAREWIEKSL--YFNKDLEVSVFETTIRVLG 60

Query: 176 GLLSAYHLSGGEQGTDSVHKGPKPIVYLETARNLADRLLLAFTSSPTPIPFSDVVLHDPS 235
           GLLSAY LSG E             V+LE AR+LADRLL A+ ++P+ IP++ + L    
Sbjct: 61  GLLSAYDLSGDE-------------VFLEKARDLADRLLPAW-NTPSGIPYNRINL---- 102

Query: 236 AHSSPD------GLSSTSEVSTLQLEFNYLSTVSGDPKYGVEAMKVLAHMKNLPKVEGLV 289
           A+ + D      G S  ++  + QLEF  LS  + DPKY  +A KV+  ++     +GL+
Sbjct: 103 AYGNTDNPKWTRGNSILADSGSEQLEFIALSQRTKDPKYQEKAEKVIKELRKRFPEDGLL 162

Query: 290 PIYISPASGEFSGENIRLGSRGDSYYEYLIKVWLQQGTSRDANF 333
           PIYI+P +G+ S   I  G+ GDS+YEYL+K W+Q   +    F
Sbjct: 163 PIYINPLTGDKSAGAITFGAMGDSFYEYLLKAWIQGNKTETVKF 206


>IMGA|Medtr8g125210.1 Glycoside hydrolase, family 47
           chr08_pseudomolecule_IMGAG_V3 29124851-29129719 E
           EGN_Mt090430 20090702
          Length = 570

 Score =  100 bits (250), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 133/265 (50%), Gaps = 25/265 (9%)

Query: 76  NADPKWTERQ----QKVKDAFIHAWSGYKNYAMGYDELMPLSKRGVDGLGGLGATVVDAL 131
           ++ P W+ ++    +KV++ F HA+  Y  +A  +DEL PL+K   D L  LG   ++ L
Sbjct: 25  HSQPHWSSKKKRLGEKVRNMFHHAYDNYMTHAFPHDELKPLTKTFTDSLSELGNLKLERL 84

Query: 132 ---------------DTAMIMGADDIVSEAGSWIEKHLNDRISKKGQVNLFETTIRVLGG 176
                           + +IMG +    +   W+ ++L  +     ++NLFE  IRVLGG
Sbjct: 85  PQDYNGSALSLIESLSSLVIMGNNTEFEKGVRWLSENL--KFDVDARINLFECNIRVLGG 142

Query: 177 LLSAYHLSGGEQGTDSVHKGPKPIVYLETARNLADRLLLAFTSSPTPIPFSDVVLHDPSA 236
           L+SA+ L+     +  + +G      L  A +L  R L AF ++PT +P++ + L     
Sbjct: 143 LVSAHLLAS--DSSKKLLQGSYKNELLGLAEDLGKRFLPAF-NTPTGLPYAWINL-KYGV 198

Query: 237 HSSPDGLSSTSEVSTLQLEFNYLSTVSGDPKYGVEAMKVLAHMKNLPKVEGLVPIYISPA 296
             +    +STS   +L LE   LS ++GDP Y   A++ L  + ++  +  L    +  +
Sbjct: 199 MENETTETSTSGCGSLILEMGALSKLTGDPIYESVALRALRKLWSMQSLLKLFGTTLDVS 258

Query: 297 SGEFSGENIRLGSRGDSYYEYLIKV 321
           +G++   +  +G+  DS+YEYL+K 
Sbjct: 259 TGQWIEHSSGIGAGVDSFYEYLLKA 283