Jatropha Genome Database
- JcCB0466931.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0466931.10 + phase: 0 /pseudo/partial
(393 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr2g110140.1 Transcriptional factor B3; Auxin response f... 369 e-102
IMGA|Medtr1g120890.1 Transcriptional factor B3; Auxin response f... 278 3e-75
IMGA|Medtr7g121610.1 Transcriptional factor B3; Auxin response f... 253 1e-67
IMGA|Medtr7g121710.1 Transcriptional factor B3; Auxin response f... 253 1e-67
IMGA|Medtr7g121700.1 Transcriptional factor B3; Auxin response f... 137 1e-32
IMGA|Medtr7g121600.1 Transcriptional factor B3; Auxin response f... 137 1e-32
IMGA|Medtr5g089510.1 Transcriptional factor B3; Auxin response f... 105 4e-23
IMGA|Medtr5g044210.1 Transcriptional factor B3; Auxin response f... 92 5e-19
IMGA|Medtr8g132840.1 Transcriptional factor B3; Auxin response f... 89 3e-18
IMGA|Medtr4g161090.1 Transcriptional factor B3; Auxin response f... 85 7e-17
IMGA|Medtr5g084140.1 Transcriptional factor B3; Auxin response f... 84 9e-17
IMGA|Medtr2g018270.1 Transcriptional factor B3; Auxin response f... 82 4e-16
IMGA|Medtr2g022250.1 Transcriptional factor B3; Auxin response f... 79 4e-15
IMGA|Medtr4g152210.1 AUX/IAA protein; Transcriptional factor B3;... 79 5e-15
IMGA|Medtr4g152210.2 Transcriptional factor B3; Auxin response f... 78 6e-15
IMGA|Medtr3g086210.1 Transcriptional factor B3; Auxin response f... 78 8e-15
IMGA|Medtr5g071940.1 Auxin response factor chr05_pseudomolecule_... 77 2e-14
IMGA|Medtr4g019570.1 AUX/IAA protein; Transcriptional factor B3;... 70 1e-12
IMGA|Medtr2g110840.1 Transcriptional factor B3; Auxin response f... 69 6e-12
IMGA|Medtr2g005100.1 AUX/IAA protein; Transcriptional factor B3;... 68 8e-12
IMGA|Medtr5g033650.1 Auxin response factor chr05_pseudomolecule_... 68 8e-12
IMGA|Medtr5g044140.1 Transcriptional factor B3; Aspartate/ornith... 68 9e-12
IMGA|Medtr2g006190.1 Transcriptional factor B3; Auxin response f... 64 1e-10
IMGA|Medtr4g081060.1 Transcriptional factor B3; Auxin response f... 64 1e-10
IMGA|Medtr4g080860.1 Transcriptional factor B3; Auxin response f... 64 1e-10
IMGA|Medtr2g006560.1 Transcriptional factor B3; Auxin response f... 63 2e-10
>IMGA|Medtr2g110140.1 Transcriptional factor B3; Auxin response
factor; Aux/IAA_ARF_dimerisation
chr02_pseudomolecule_IMGAG_V3 25776282-25779770 E
EGN_Mt090430 20090702
Length = 663
Score = 369 bits (946), Expect = e-102, Method: Compositional matrix adjust.
Identities = 210/391 (53%), Positives = 246/391 (62%), Gaps = 27/391 (6%)
Query: 16 KVRAESVIQAATLAANGQPFDAVYYPRASTPEFCVKASAVRAAMQIQWCPGMRFKMAFET 75
KV ESV +A LAA+ Q F+ VYYPRASTPEFC+K SAV+AAM+IQWC GMRFKM FET
Sbjct: 262 KVSGESVKEAMRLAASNQTFEVVYYPRASTPEFCIKTSAVKAAMRIQWCSGMRFKMPFET 321
Query: 76 EDSSRISWFMGTISSVQVADPIRWPSSPWRLLQVAWDEPDLLQNVKCVSPWLVELVSNMP 135
EDSSRISWFMGTISSVQV DPIRWP+SPWRLLQV WDEPDLL NVK VSPWLVELVSNM
Sbjct: 322 EDSSRISWFMGTISSVQVVDPIRWPNSPWRLLQVTWDEPDLLHNVKRVSPWLVELVSNMS 381
Query: 136 AIHLSPFSXXXXXXXXXXXXDFPL-LGHFPMPSFTSNPLNSNSPLCCVSD----NIP-AG 189
IHL+PFS DFPL + F +P+F+ NP N PLCC+S N P AG
Sbjct: 382 MIHLAPFSPPRKKLRFPQHPDFPLDVVQFQIPTFSGNPFN---PLCCLSSSDNYNAPAAG 438
Query: 190 IQGARHAQYGLSSADLHF--NKLQSSPFPVGFQQLDCAAQFSRIPSCKVLGNTENNDDIS 247
IQGARHAQ G+S +DLH NK Q FP + + S + + + ++ + IS
Sbjct: 439 IQGARHAQIGISLSDLHLNNNKFQLGVFPNNRETI------SNVSNITTNHDNKSKESIS 492
Query: 248 CLLTMGNPTTAS--SKENSETKTPHILLFGQLIFTDQQSFQXXXXXXXXXXXXXXXPEKM 305
CLLT+GN S K ++ LLFGQ I T+QQ EK
Sbjct: 493 CLLTIGNSHKRSLEIKSDNNDNRHQFLLFGQPILTEQQ-ISRKDSSDDVLLSKKKDKEKW 551
Query: 306 INLSDGPVSAFHQAIPLENSSDEGSP---WYQKTDLSLETGHCKVFRESDDLGRTLDLSV 362
S Q P ++S+ S W L L+TGHCKVF ES+D+GRTLDLS
Sbjct: 552 FFSDTTQSSISEQFSPAKSSTTSASADFCW----QLGLDTGHCKVFLESEDVGRTLDLSC 607
Query: 363 FGSYEELYGKLANMFGVKRSDMFSSVLYRDA 393
GSYEELY KLA MFG++RS+M S VLYRDA
Sbjct: 608 VGSYEELYRKLAKMFGIERSEMLSRVLYRDA 638
>IMGA|Medtr1g120890.1 Transcriptional factor B3; Auxin response
factor chr01_pseudomolecule_IMGAG_V3 26179316-26183204 E
EGN_Mt090430 20090702
Length = 619
Score = 278 bits (711), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 174/357 (48%), Positives = 214/357 (59%), Gaps = 45/357 (12%)
Query: 12 DMKGKVRAESVIQAATLAANGQPFDAVYYPRASTPEFCVKASAVRAAMQIQWCPGMRFKM 71
D+ GKV AESV++A A NG+ F+ VYYPRASTPEFCVK S+V++AMQIQWC GMRFKM
Sbjct: 265 DLMGKVGAESVVEAVNCAVNGRSFEVVYYPRASTPEFCVKVSSVKSAMQIQWCSGMRFKM 324
Query: 72 AFETEDSSRISWFMGTISSVQVADPIRWPSSPWRLLQVAWDEPDLLQNVKCVSPWLVELV 131
FETEDSSRISWFMGTISSV V DPIRWP SPWRLLQV WDEPDLLQNVKCV+PWLVELV
Sbjct: 325 PFETEDSSRISWFMGTISSVHVQDPIRWPDSPWRLLQVVWDEPDLLQNVKCVNPWLVELV 384
Query: 132 SNMPAIHLSPFSXXXXXXXXXXXXDFPLLGHFPMPSFTSNPL--NSNSPLCCVSD----- 184
SNMP +LSPF+ F L+ PS ++ L + S LC + D
Sbjct: 385 SNMPNFNLSPFTPPRKKPRFIQDPYFHLMNQSSSPSISNINLLNYTKSSLCNIQDTTTNS 444
Query: 185 NIPAGIQGARHAQYGLSSAD----LHFNKLQSSPFPVGFQQLDCAAQ---FSRIP----- 232
+ + IQGARHAQ+G + + + FNKL +G L Q +R P
Sbjct: 445 SFASSIQGARHAQFGPNYNNPSDLIPFNKLLQQDMFLGNLSLSRFNQQQPITRPPYGPYK 504
Query: 233 SCKVLGNTENNDDISCLLTMGNPTTASSKENSETKTP----HILLFGQLIFTDQQSFQXX 288
S NT+ N D+SCLL++GN + + N E K P HILLFG++I T+Q S
Sbjct: 505 SINNNNNTKTNVDLSCLLSVGNSGQSFKESNIEAKAPHNHNHILLFGKIIHTEQNSSNI- 563
Query: 289 XXXXXXXXXXXXXPEKMINLSDG---PVSAFHQAIPLENSSDEGSPWYQ----KTDL 338
K ++S+G S + P+ENSSD GSPWY+ K+DL
Sbjct: 564 --------------SKSDSVSEGTSLKTSNASSSDPVENSSDGGSPWYKDQQHKSDL 606
>IMGA|Medtr7g121610.1 Transcriptional factor B3; Auxin response
factor chr07_pseudomolecule_IMGAG_V3 28650966-28645297 H
EGN_Mt090430 20090702
Length = 667
Score = 253 bits (646), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 134/271 (49%), Positives = 174/271 (64%), Gaps = 8/271 (2%)
Query: 14 KGKVRAESVIQAATLAANGQPFDAVYYPRASTPEFCVKASAVRAAMQIQWCPGMRFKMAF 73
+GKV+A VI+A L N QPFD VYYPR+ TPEF VK S + A+QI+WCPGMRFKMA
Sbjct: 292 RGKVKALEVIEAVRLGTNMQPFDVVYYPRSGTPEFFVKTSLIGMALQIRWCPGMRFKMAI 351
Query: 74 ETEDSSRISWFMGTISSVQVADPIRWPSSPWRLLQVAWDEPDLLQNVKCVSPWLVELVSN 133
ETEDSSRISWF+GT++SVQ ADP W S WRLL+V WDEP+LL+NVK V+PW VE+VSN
Sbjct: 352 ETEDSSRISWFIGTVASVQAADP-SWSDSMWRLLEVTWDEPELLKNVKRVNPWQVEIVSN 410
Query: 134 MPAIHLSPFSXXXXXXXXXXXXDFPLLGHFPMPSFTSNPLNSNSPLCCVSDNIPAGIQGA 193
MP+I LSPF DFP+ G FPMP+F +N L+ N P+ + + PAG+QGA
Sbjct: 411 MPSIPLSPFIPPRKKLRLPQLPDFPIDGQFPMPTFPNNLLSPNIPIFYLPETSPAGMQGA 470
Query: 194 RHAQYGLSSADLHFNKLQSSPFPVGFQQ--LDCAAQFSRIPSCKVLGNTENNDDISCLLT 251
RH +G++ D H L F FQQ + A +P+ L ++++SC +
Sbjct: 471 RHGHFGVTLPDFH--NLPLGLFQPSFQQPFNNIATMPMTVPNNPALQKPNTSENVSCSHS 528
Query: 252 MGNPTTASSKENSETKTPH-ILLFGQLIFTD 281
+ T+A S E + PH ++LFGQ I D
Sbjct: 529 IS--TSAQSSEKPDHAKPHQLVLFGQTIQVD 557
>IMGA|Medtr7g121710.1 Transcriptional factor B3; Auxin response
factor chr07_pseudomolecule_IMGAG_V3 28714280-28708478 H
EGN_Mt090430 20090702
Length = 717
Score = 253 bits (646), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 134/271 (49%), Positives = 174/271 (64%), Gaps = 8/271 (2%)
Query: 14 KGKVRAESVIQAATLAANGQPFDAVYYPRASTPEFCVKASAVRAAMQIQWCPGMRFKMAF 73
+GKV+A VI+A L N QPFD VYYPR+ TPEF VK S + A+QI+WCPGMRFKMA
Sbjct: 292 RGKVKALEVIEAVRLGTNMQPFDVVYYPRSGTPEFFVKTSLIGMALQIRWCPGMRFKMAI 351
Query: 74 ETEDSSRISWFMGTISSVQVADPIRWPSSPWRLLQVAWDEPDLLQNVKCVSPWLVELVSN 133
ETEDSSRISWF+GT++SVQ ADP W S WRLL+V WDEP+LL+NVK V+PW VE+VSN
Sbjct: 352 ETEDSSRISWFIGTVASVQAADP-SWSDSMWRLLEVTWDEPELLKNVKRVNPWQVEIVSN 410
Query: 134 MPAIHLSPFSXXXXXXXXXXXXDFPLLGHFPMPSFTSNPLNSNSPLCCVSDNIPAGIQGA 193
MP+I LSPF DFP+ G FPMP+F +N L+ N P+ + + PAG+QGA
Sbjct: 411 MPSIPLSPFIPPRKKLRLPQLPDFPIDGQFPMPTFPNNLLSPNIPIFYLPETSPAGMQGA 470
Query: 194 RHAQYGLSSADLHFNKLQSSPFPVGFQQ--LDCAAQFSRIPSCKVLGNTENNDDISCLLT 251
RH +G++ D H L F FQQ + A +P+ L ++++SC +
Sbjct: 471 RHGHFGVTLPDFH--NLPLGLFQPSFQQPFNNIATMPMTVPNNPALQKPNTSENVSCSHS 528
Query: 252 MGNPTTASSKENSETKTPH-ILLFGQLIFTD 281
+ T+A S E + PH ++LFGQ I D
Sbjct: 529 IS--TSAQSSEKPDHAKPHQLVLFGQTIQVD 557
>IMGA|Medtr7g121700.1 Transcriptional factor B3; Auxin response
factor chr07_pseudomolecule_IMGAG_V3 28706147-28705112 H
EGN_Mt090430 20090702
Length = 328
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 63/96 (65%), Positives = 73/96 (76%), Gaps = 1/96 (1%)
Query: 14 KGKVRAESVIQAATLAANGQPFDAVYYPRASTPEFCVKASAVRAAMQIQWCPGMRFKMAF 73
+GKV+ VI+A L N QPFD VYYPR+ TPEF VK S + +QI+WCPGMRFKM
Sbjct: 234 RGKVKVLEVIEAVRLGTNMQPFDVVYYPRSGTPEFFVKTSLIGITLQIRWCPGMRFKMPI 293
Query: 74 ETEDSSRISWFMGTISSVQVADPIRWPSSPWRLLQV 109
ETEDSSRISWF+GT++SVQ ADP WP S WRLLQV
Sbjct: 294 ETEDSSRISWFIGTVASVQAADP-SWPDSLWRLLQV 328
>IMGA|Medtr7g121600.1 Transcriptional factor B3; Auxin response
factor chr07_pseudomolecule_IMGAG_V3 28642832-28641797 H
EGN_Mt090430 20090702
Length = 328
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 63/96 (65%), Positives = 73/96 (76%), Gaps = 1/96 (1%)
Query: 14 KGKVRAESVIQAATLAANGQPFDAVYYPRASTPEFCVKASAVRAAMQIQWCPGMRFKMAF 73
+GKV+ VI+A L N QPFD VYYPR+ TPEF VK S + +QI+WCPGMRFKM
Sbjct: 234 RGKVKVLEVIEAVRLGTNMQPFDVVYYPRSGTPEFFVKTSLIGITLQIRWCPGMRFKMPI 293
Query: 74 ETEDSSRISWFMGTISSVQVADPIRWPSSPWRLLQV 109
ETEDSSRISWF+GT++SVQ ADP WP S WRLLQV
Sbjct: 294 ETEDSSRISWFIGTVASVQAADP-SWPDSLWRLLQV 328
>IMGA|Medtr5g089510.1 Transcriptional factor B3; Auxin response
factor chr05_pseudomolecule_IMGAG_V3 34796072-34797913 H
EGN_Mt090430 20090702
Length = 460
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 80/127 (62%), Gaps = 7/127 (5%)
Query: 15 GKVRAESVIQAATLAANGQPFDAVYYPRAST-PEFCVKASAVRAAMQIQWCPGMRFKMAF 73
K+ +SV++AA LA F+ +YYP AS F V A AV+ AMQI W GMR K
Sbjct: 225 AKITEKSVMEAAELADKNMTFEVIYYPTASHWCNFVVDAEAVKKAMQINWQSGMRVKHCL 284
Query: 74 ETEDSS-RISWFMGTISSVQVADPIRWPSSPWRLLQVAWDEPDLLQNVKCVSPWLVELVS 132
+T++SS R S F GT+S++ +DP PWR+LQV WDE ++ QN VSPW +EL+S
Sbjct: 285 KTDESSKRSSIFQGTVSAL--SDPSH---HPWRMLQVNWDESEVSQNPSQVSPWQIELIS 339
Query: 133 NMPAIHL 139
+ PA+ L
Sbjct: 340 HTPALPL 346
>IMGA|Medtr5g044210.1 Transcriptional factor B3; Auxin response
factor chr05_pseudomolecule_IMGAG_V3 18350943-18348818 H
EGN_Mt090430 20090702
Length = 524
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 129/292 (44%), Gaps = 32/292 (10%)
Query: 15 GKVRAESVIQAATLAANGQPFDAVYYPRAST-PEFCVKASAVRAAMQIQWCPGMRFKMAF 73
K+ +S +A LA F+ VYYP A F V A V AM I W G+R +++
Sbjct: 221 AKITEKSFTEAVELADKNLAFEVVYYPTAKGWCNFVVDAKVVEDAMNISWSLGVRIELSS 280
Query: 74 ETEDSS-RISWFMGTISSVQVADPIRWPSSPWRLLQVAWDEPDLLQNVKCVSPWLVELVS 132
+ DSS R S F GTIS++ P+ PWR+L+V WDEP + Q + VSPW VE +S
Sbjct: 281 KNYDSSKRCSKFEGTISALSA------PNCPWRMLEVKWDEPKVSQVPERVSPWEVETIS 334
Query: 133 NMPAIH---------------LSPFSXXXXXXXXXXXXDFPLLGHFPMPSFTSNPLNSNS 177
++ A+H + FS F L P F + S++
Sbjct: 335 DIFALHPQFHPTKKLKKSDPDSAAFSDKKGDSFIPNIEAF--LKMVPNIEFKHFVMTSSN 392
Query: 178 PLCCVSDNIPAGIQGARHAQYGLSSADLHFNKLQSSPFPVGFQQLDCAAQFSRIPSCKV- 236
+D +QGARH + S++ +F +S+ F +G + ++ S P+
Sbjct: 393 QTLLNNDAFLDSMQGARHGLFSTSTSS-NFGNDKSNGF-LGNNSMAVSSNVSSEPNTAAP 450
Query: 237 --LGNTENNDDISCLLTMGNPTTASSKENSETKTPHILLFGQLIFTDQQSFQ 286
L + ++ DIS + G + + +LFG++I + FQ
Sbjct: 451 ISLDLSPHSHDISN--SRGTKFAGTDSSTEKVSPGSFMLFGKIIKPVRSDFQ 500
>IMGA|Medtr8g132840.1 Transcriptional factor B3; Auxin response
factor; Aux/IAA_ARF_dimerisation
chr08_pseudomolecule_IMGAG_V3 31477595-31471354 E
EGN_Mt090430 20090702
Length = 1120
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 31 NGQPFDAVYYPRASTPEFCVKASAVRAAMQIQWCPGMRFKMAFETEDSSRISWFMGTISS 90
N PF Y PRAS EF V + AM Q GMRF+M FETE+S + +MGT++
Sbjct: 258 NNSPFTIYYNPRASPSEFVVPLAKYNKAMYTQVSLGMRFRMMFETEESG-VRRYMGTVTG 316
Query: 91 VQVADPIRWPSSPWRLLQVAWDEPDLLQNVKCVSPWLVELV 131
+ DP+RW +S WR LQV WDE + VS W +E V
Sbjct: 317 ISDLDPVRWKNSQWRNLQVGWDESTAGERPSRVSIWDIEPV 357
>IMGA|Medtr4g161090.1 Transcriptional factor B3; Auxin response
factor; Aux/IAA_ARF_dimerisation
chr04_pseudomolecule_IMGAG_V3 41048269-41053932 E
EGN_Mt090430 20090702
Length = 1096
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 34 PFDAVYYPRASTPEFCVK-ASAVRAAMQIQWCPGMRFKMAFETEDSSRISWFMGTISSVQ 92
PF Y PRAS EF + A RA Q PGMRF+M FETEDS +MGT+ V
Sbjct: 270 PFTVFYNPRASPSEFVIPLAKYYRAVYSHQISPGMRFRMMFETEDSG-TRRYMGTVIGVS 328
Query: 93 VADPIRWPSSPWRLLQVAWDEPDLLQNVKCVSPWLVELVS 132
D +RW +S WR LQV WDE + VS W +E V+
Sbjct: 329 DLDSVRWKNSQWRNLQVGWDEATAGERRSRVSIWEIEPVT 368
>IMGA|Medtr5g084140.1 Transcriptional factor B3; Auxin response
factor; Aux/IAA_ARF_dimerisation
chr05_pseudomolecule_IMGAG_V3 31997139-31987335 E
EGN_Mt090430 20090702
Length = 841
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 35 FDAVYYPRASTPEFCVKASA-VRAAMQIQWCPGMRFKMAFETEDSSRISWFMGTISSVQV 93
F + PRAS EF + S ++A + GMRF+M FETE+SS + +MGTI+S+
Sbjct: 264 FTVFFNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESS-VRRYMGTITSISD 322
Query: 94 ADPIRWPSSPWRLLQVAWDEPDLLQNVKCVSPWLVELVSNMP 135
DP+RWP+S WR ++V WDE + VS W +E ++ P
Sbjct: 323 MDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 364
>IMGA|Medtr2g018270.1 Transcriptional factor B3; Auxin response
factor chr02_pseudomolecule_IMGAG_V3 4770477-4766018 E
EGN_Mt090430 20090702
Length = 750
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Query: 35 FDAVYYPRASTPEFCVKASAVRAAMQIQWCPGMRFKMAFETEDSSRISWFMGTISSVQVA 94
F Y PR S+ EF + + ++ + GMRF+M FETED++ F G I+ + A
Sbjct: 294 FSVCYNPRVSSSEFIIPVNKFLKSLDCSYSAGMRFRMRFETEDAAE-RRFTGLIAGISDA 352
Query: 95 DPIRWPSSPWRLLQVAWDEPDLLQNVKCVSPWLVE 129
DP+RWP S W+ L V WD+ + ++ VSPW +E
Sbjct: 353 DPVRWPGSKWKCLLVRWDDIEASRHNNRVSPWEIE 387
>IMGA|Medtr2g022250.1 Transcriptional factor B3; Auxin response
factor; Aux/IAA_ARF_dimerisation
chr02_pseudomolecule_IMGAG_V3 5896756-5890761 E
EGN_Mt090430 20090702
Length = 915
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 35 FDAVYYPRASTPEFCVK-ASAVRAAMQIQWCPGMRFKMAFETEDSSRISWFMGTISSVQV 93
F Y PRA EF + A V+A + GMRF+M FETE+SS + +MGTI+ +
Sbjct: 270 FTIFYNPRACPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESS-VRRYMGTITGICD 328
Query: 94 ADPIRWPSSPWRLLQVAWDEPDLLQNVKCVSPWLVELVSNMPAIHLSPF 142
D +RWP+S WR ++V WDE + VS W +E ++ P ++ SPF
Sbjct: 329 LDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP-MYPSPF 376
>IMGA|Medtr4g152210.1 AUX/IAA protein; Transcriptional factor B3;
Auxin response factor chr04_pseudomolecule_IMGAG_V3
37661517-37656640 E EGN_Mt090430 20090702
Length = 821
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Query: 32 GQPFDAVYYPRASTPEFCVKASAVRAAMQIQWCPGMRFKMAFETEDSSRISWFMGTISSV 91
G F Y PR S EF V +++ + GMRFKM FE E++ F GTI +
Sbjct: 283 GTMFTVYYKPRTSPAEFIVPYDQYMESLKNNYTIGMRFKMRFEGEEAPE-QRFTGTIVGI 341
Query: 92 QVADPIRWPSSPWRLLQVAWDEPDLLQNVKCVSPWLVELVSNMPAIHLSPF 142
+ +D RWP+S WR L+V WDE + + VSPW +E PA++ P
Sbjct: 342 EDSDSKRWPTSKWRCLKVRWDETSNIPRPERVSPWKIEPALAPPALNPLPM 392
>IMGA|Medtr4g152210.2 Transcriptional factor B3; Auxin response
factor chr04_pseudomolecule_IMGAG_V3 37661517-37656640 E
EGN_Mt090430 20090702
Length = 715
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Query: 32 GQPFDAVYYPRASTPEFCVKASAVRAAMQIQWCPGMRFKMAFETEDSSRISWFMGTISSV 91
G F Y PR S EF V +++ + GMRFKM FE E++ F GTI +
Sbjct: 283 GTMFTVYYKPRTSPAEFIVPYDQYMESLKNNYTIGMRFKMRFEGEEAPE-QRFTGTIVGI 341
Query: 92 QVADPIRWPSSPWRLLQVAWDEPDLLQNVKCVSPWLVELVSNMPAIHLSPF 142
+ +D RWP+S WR L+V WDE + + VSPW +E PA++ P
Sbjct: 342 EDSDSKRWPTSKWRCLKVRWDETSNIPRPERVSPWKIEPALAPPALNPLPM 392
>IMGA|Medtr3g086210.1 Transcriptional factor B3; Auxin response
factor; Aux/IAA_ARF_dimerisation
chr03_pseudomolecule_IMGAG_V3 20132850-20126074 E
EGN_Mt090430 20090702
Length = 849
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 58/102 (56%), Gaps = 2/102 (1%)
Query: 35 FDAVYYPRASTPEFCVKASA-VRAAMQIQWCPGMRFKMAFETEDSSRISWFMGTISSVQV 93
F Y PRAS EF + S ++A + GMRF+M FETE+SS + +MGTI+ +
Sbjct: 266 FTVFYNPRASPSEFVIPLSKYIKAVYHTRISVGMRFRMLFETEESS-VRRYMGTITGISD 324
Query: 94 ADPIRWPSSPWRLLQVAWDEPDLLQNVKCVSPWLVELVSNMP 135
D +RW +S WR ++V WDE + VS W +E ++ P
Sbjct: 325 LDAVRWQNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 366
>IMGA|Medtr5g071940.1 Auxin response factor
chr05_pseudomolecule_IMGAG_V3 25566266-25565464 H
EGN_Mt090430 20090702
Length = 123
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 63/115 (54%), Gaps = 7/115 (6%)
Query: 23 IQAATLAANGQPFDAVYYPRASTPEFCVKASAVRAAMQIQWCPGMRFKMAFETEDSSRIS 82
+ A L F+ +YYPRA+ +F A+ V M+I W GM+ K+ + E+SS
Sbjct: 1 MDAVELVVKSMAFEVLYYPRANWIDFVEDANVVDDGMKISWTSGMKVKLPLKKEESSNSK 60
Query: 83 WFM----GTISSVQVADPIRWPSSPWRLLQVAWDEPDLLQNVKCVSPWLVELVSN 133
GT S V A P P+ WR+LQV WDEP++ QN V+PW VEL+++
Sbjct: 61 MIFYQPRGTNSDVYKA-PSNVPN--WRMLQVKWDEPEISQNPNRVNPWQVELINH 112
>IMGA|Medtr4g019570.1 AUX/IAA protein; Transcriptional factor B3;
Auxin response factor chr04_pseudomolecule_IMGAG_V3
4019217-4014242 E EGN_Mt090430 20090702
Length = 666
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 22 VIQAATLAANGQPFDAVYY-PRASTPEFCVKASAVRAAMQIQWCPGMRFKMAFETEDSSR 80
V+ A+ A Q VYY PR S +F V + +A+ ++ GMRF+M FE++DS+
Sbjct: 242 VLATASHAVATQTLFVVYYKPRTS--QFIVSVNKYLSAVSNKFAVGMRFRMRFESDDSAE 299
Query: 81 I-SWFMGTISSVQVADPIRWPSSPWRLLQVAWDEPDLLQNVKCVSPWLVE 129
F GTI V+ P W +S WR L+V WDEP + VSPW +E
Sbjct: 300 SDKRFSGTIVGVEDISP-HWANSKWRSLKVQWDEPSAITRPDRVSPWEIE 348
>IMGA|Medtr2g110840.1 Transcriptional factor B3; Auxin response
factor; Aux/IAA_ARF_dimerisation
chr02_pseudomolecule_IMGAG_V3 26146196-26149942 H
EGN_Mt090430 20090702
Length = 672
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%)
Query: 35 FDAVYYPRASTPEFCVKASAVRAAMQIQWCPGMRFKMAFETEDSSRISWFMGTISSVQVA 94
F Y PRAS +F V +++ G RFKM FE ++S G ++ +
Sbjct: 166 FHVFYSPRASHADFVVPYQKYAKSIRNPVTIGTRFKMKFEMDESPERRCSSGIVTGMSDL 225
Query: 95 DPIRWPSSPWRLLQVAWDEPDLLQNVKCVSPWLVELVSNMPAIHL 139
DP +WP S WR L V WDE + VSPW ++ +++P +++
Sbjct: 226 DPYKWPKSKWRCLMVRWDEDIGANHQDRVSPWEIDPSTSLPPLNI 270
>IMGA|Medtr2g005100.1 AUX/IAA protein; Transcriptional factor B3;
Auxin response factor chr02_pseudomolecule_IMGAG_V3
92528-103456 E EGN_Mt090430 20090702
Length = 670
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 54/113 (47%), Gaps = 2/113 (1%)
Query: 25 AATLAANGQPFDAVYYPRASTPEFCVKASAVRAAMQIQWCPGMRFKMAFETEDSSRISWF 84
A+ + G F Y PR S EF V + A + GMRFKM FE ++ F
Sbjct: 250 ASHAISTGTLFSVFYKPRTSRSEFIVSINKYLEARNHKLSVGMRFKMRFEGDEVPERR-F 308
Query: 85 MGTISSVQVADPIRWPSSPWRLLQVAWDEPDLLQNVKCVSPWLVE-LVSNMPA 136
GTI V+ W S WR L+V WDEP + VSPW +E LVS PA
Sbjct: 309 SGTIVGVEDNKSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVSTPPA 361
>IMGA|Medtr5g033650.1 Auxin response factor
chr05_pseudomolecule_IMGAG_V3 13732467-13735488 H
EGN_Mt090430 20090702
Length = 323
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
Query: 23 IQAATLAANGQPFDAVYYPRASTPEFCVKASAVRAAMQI-QWCPGMRFKMAFETEDSSRI 81
I A +AAN VYYP A EF V S A+ + Q G+RF M FET+ +
Sbjct: 36 IDALVVAANRTLLPVVYYPGACVSEFVVPLSKYNNALFVSQLSIGLRFDMMFETK-AFDT 94
Query: 82 SWFMGTISSVQVADPIRWPSSPWRLLQVAWDEPD 115
MGTI + DP+ WP S W+ ++V WD+PD
Sbjct: 95 CCNMGTIVGISDLDPLMWPDSRWKNIEVKWDKPD 128
>IMGA|Medtr5g044140.1 Transcriptional factor B3; Aspartate/ornithine
carbamoyltransferase; Auxin response factor
chr05_pseudomolecule_IMGAG_V3 18287866-18289246 H
EGN_Mt090430 20090702
Length = 410
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 8/106 (7%)
Query: 16 KVRAESVIQAATLAANGQPFDAVYYPRAST-PEFCVKASAVRAAMQIQWCPGMRFKMAFE 74
K+ +SV +A LA FD VYYP A +F V A V AM+ +W G+R K + +
Sbjct: 225 KIAEKSVTEAVELAEKNMAFDVVYYPTAEGWCDFVVNAKVVEDAMKNKWNSGLRIKHSLK 284
Query: 75 TEDSS-RISWFMGTISSVQVADPIRWPSSPWRLLQVAWDEPDLLQN 119
++SS R S F GTIS++ P+ PWR+L+V + L N
Sbjct: 285 KDNSSKRCSNFEGTISALSA------PNRPWRMLEVRTAKDSALHN 324
>IMGA|Medtr2g006190.1 Transcriptional factor B3; Auxin response
factor chr02_pseudomolecule_IMGAG_V3 557807-558763 H
EGN_Mt090430 20090702
Length = 318
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 55/91 (60%), Gaps = 10/91 (10%)
Query: 20 ESVIQAATLAANGQPFDAVYYPRAST-PEFCVKASAVRAAMQIQWCPGMRFKMAFETEDS 78
++V++A LA +PF+ VYYPR +F V + V +M+IQW P MR KM +T+ S
Sbjct: 237 KAVMEAVKLAEENKPFEIVYYPRGDDWCDFVVDGNIVDESMKIQWNPRMRVKM--KTDKS 294
Query: 79 SRISWFMGTISSVQVADPIRWPSSPWRLLQV 109
SRI + GTI++V S+ WR+LQV
Sbjct: 295 SRIP-YQGTITTVSRT------SNLWRMLQV 318
>IMGA|Medtr4g081060.1 Transcriptional factor B3; Auxin response
factor chr04_pseudomolecule_IMGAG_V3 16820370-16816304 E
EGN_Mt090430 20090702
Length = 471
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 48/105 (45%)
Query: 35 FDAVYYPRASTPEFCVKASAVRAAMQIQWCPGMRFKMAFETEDSSRISWFMGTISSVQVA 94
F Y PRAS EF V +++ G RFKM E ++S G + +
Sbjct: 316 FHVFYSPRASHAEFVVPYQKYVKSIKNPMTIGTRFKMRIEMDESPERRCSSGMLIGINDL 375
Query: 95 DPIRWPSSPWRLLQVAWDEPDLLQNVKCVSPWLVELVSNMPAIHL 139
DP RWP S WR L V WD+ + VSPW ++ S P + +
Sbjct: 376 DPYRWPKSKWRCLMVRWDDDTETNHQDRVSPWEIDPSSPQPPLSI 420
>IMGA|Medtr4g080860.1 Transcriptional factor B3; Auxin response
factor chr04_pseudomolecule_IMGAG_V3 16694919-16690853 E
EGN_Mt090430 20090702
Length = 471
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 48/105 (45%)
Query: 35 FDAVYYPRASTPEFCVKASAVRAAMQIQWCPGMRFKMAFETEDSSRISWFMGTISSVQVA 94
F Y PRAS EF V +++ G RFKM E ++S G + +
Sbjct: 316 FHVFYSPRASHAEFVVPYQKYVKSIKNPMTIGTRFKMRIEMDESPERRCSSGMLIGINDL 375
Query: 95 DPIRWPSSPWRLLQVAWDEPDLLQNVKCVSPWLVELVSNMPAIHL 139
DP RWP S WR L V WD+ + VSPW ++ S P + +
Sbjct: 376 DPYRWPKSKWRCLMVRWDDDTETNHQDRVSPWEIDPSSPQPPLSI 420
>IMGA|Medtr2g006560.1 Transcriptional factor B3; Auxin response
factor chr02_pseudomolecule_IMGAG_V3 692852-696745 H
EGN_Mt090430 20090702
Length = 376
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 55/91 (60%), Gaps = 10/91 (10%)
Query: 20 ESVIQAATLAANGQPFDAVYYPRAST-PEFCVKASAVRAAMQIQWCPGMRFKMAFETEDS 78
++V++A LA +PF+ VYYPR +F V + V +M+IQW P MR KM +T+ S
Sbjct: 295 KAVMEAVKLAEENKPFEIVYYPRGDDWCDFVVDGNIVDESMKIQWNPRMRVKM--KTDKS 352
Query: 79 SRISWFMGTISSVQVADPIRWPSSPWRLLQV 109
SRI + GTI++V S+ WR+LQV
Sbjct: 353 SRIP-YQGTITTVSRT------SNLWRMLQV 376