Jatropha Genome Database

JcCB0465701.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0465701.10 - phase: 0 /partial
         (114 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g036860.1 Heat shock protein DnaJ, N-terminal chr05_p...    51   2e-07
IMGA|Medtr1g140590.1 Heat shock protein DnaJ, N-terminal chr01_p...    49   5e-07
IMGA|Medtr2g017990.1 Heat shock protein DnaJ chr02_pseudomolecul...    46   5e-06
IMGA|Medtr5g022130.1 Heat shock protein DnaJ, N-terminal chr05_p...    45   9e-06

>IMGA|Medtr5g036860.1 Heat shock protein DnaJ, N-terminal
           chr05_pseudomolecule_IMGAG_V3 15439642-15434791 E
           EGN_Mt090430 20090702
          Length = 414

 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 3/66 (4%)

Query: 49  YDVLGIKRFSSIEEVKDAYEKLSSKW--NSSAEVPSAAD-FIEIQYAYELLKNPLWKRDY 105
           Y+VLG+ R S+ +E+K AY KL+ K+  + +A  P AAD F E  ++Y LL +P  +R Y
Sbjct: 27  YEVLGVSRNSTDQEIKSAYRKLALKFHPDKNANDPKAADLFKEATFSYNLLSDPDKRRQY 86

Query: 106 DIFGID 111
           D  G +
Sbjct: 87  DSSGFE 92


>IMGA|Medtr1g140590.1 Heat shock protein DnaJ, N-terminal
           chr01_pseudomolecule_IMGAG_V3 31113704-31119188 E
           EGN_Mt090430 20090702
          Length = 410

 Score = 49.3 bits (116), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 3/66 (4%)

Query: 49  YDVLGIKRFSSIEEVKDAYEKLSSKW--NSSAEVPSAAD-FIEIQYAYELLKNPLWKRDY 105
           Y+VLG+ + SS +E+K AY KL+ K+  + +A  P A++ F E+ Y+Y +L +P  +R Y
Sbjct: 14  YEVLGVSKESSDQEIKTAYRKLALKYHPDKNANNPEASELFKEVAYSYNILSDPEKRRQY 73

Query: 106 DIFGID 111
           D  G +
Sbjct: 74  DSAGFE 79


>IMGA|Medtr2g017990.1 Heat shock protein DnaJ
           chr02_pseudomolecule_IMGAG_V3 4637521-4639373 F
           EGN_Mt090430 20090702
          Length = 340

 Score = 45.8 bits (107), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 4/66 (6%)

Query: 48  HYDVLGIKRFSSIEEVKDAYEKLSSKW----NSSAEVPSAADFIEIQYAYELLKNPLWKR 103
           +Y +L + + ++ EE+K AY KL+ KW    N S +  + A F EI  AYE+L +P  K 
Sbjct: 5   YYKILKVDKNATEEELKKAYRKLAMKWHPDKNPSNKKDAEAKFKEISEAYEVLSDPQKKA 64

Query: 104 DYDIFG 109
            YD +G
Sbjct: 65  IYDQYG 70


>IMGA|Medtr5g022130.1 Heat shock protein DnaJ, N-terminal
           chr05_pseudomolecule_IMGAG_V3 8588592-8589412 F
           EGN_Mt090430 20090702
          Length = 168

 Score = 45.1 bits (105), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 15/69 (21%)

Query: 48  HYDVLGIKRFSSIEEVKDAYEKLS----------SKWNSSAEVPSAADFIEIQYAYELLK 97
           HYD+LGI   +S +E+K AY +L+           + NSSA+     DF++IQ AY  L 
Sbjct: 73  HYDILGISAAASNQEIKAAYRRLARLCHPDVASVDRKNSSAD-----DFMKIQVAYSTLS 127

Query: 98  NPLWKRDYD 106
           +P  + +YD
Sbjct: 128 DPDKRANYD 136