Jatropha Genome Database

JcCB0465191.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0465191.10 - phase: 2 /pseudo/partial
         (152 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g141240.1 Protein of unknown function DUF250 chr04_ps...    98   2e-21
IMGA|Medtr3g144540.1 Protein of unknown function DUF250 chr03_ps...    92   1e-19
IMGA|Medtr1g124720.1 Protein of unknown function DUF250 chr01_ps...    88   1e-18
IMGA|Medtr2g110080.1 Protein of unknown function DUF250 chr02_ps...    75   2e-14
IMGA|Medtr5g103910.1 Protein of unknown function DUF250 chr05_ps...    49   8e-07
IMGA|Medtr4g015300.1 Protein of unknown function DUF250 chr04_ps...    47   4e-06
IMGA|Medtr3g097460.1 Protein of unknown function DUF250 chr03_ps...    45   1e-05

>IMGA|Medtr4g141240.1 Protein of unknown function DUF250
           chr04_pseudomolecule_IMGAG_V3 34838791-34834087 E
           EGN_Mt090430 20090702
          Length = 371

 Score = 97.8 bits (242), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 56/119 (47%), Positives = 76/119 (63%), Gaps = 15/119 (12%)

Query: 30  LSLQLFIILSCSLAVFCNVSQYLCIGRFSAVSFQVLGHMKTVCVLTLGWLLFDSE-LTFK 88
           L+  LFI LSC++AV  N+SQ++CIGRF+AVSFQVLGHMKT+ VLTLG++LF  E L  +
Sbjct: 223 LTSTLFIALSCTIAVGTNLSQFICIGRFTAVSFQVLGHMKTILVLTLGFILFGREGLNLQ 282

Query: 89  NIMGMVIAIAGMVVYSWAMEAEKSANAKATPHMKNSLTEEEIRLLKEGVESTPVKDIEL 147
            I+GM+IAI GM+ Y          NA + P  K S +   I      + +T  +D +L
Sbjct: 283 VIVGMIIAIMGMIWY---------GNASSKPGGKESRSSLSIP-----IPTTKTQDYDL 327


>IMGA|Medtr3g144540.1 Protein of unknown function DUF250
           chr03_pseudomolecule_IMGAG_V3 37497468-37503483 F
           EGN_Mt090430 20090702
          Length = 335

 Score = 91.7 bits (226), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 49/104 (47%), Positives = 68/104 (65%), Gaps = 14/104 (13%)

Query: 30  LSLQLFIILSCSLAVFCNVSQYLCIGRFSAVSFQVLGHMKTVCVLTLGWLLFDSE-LTFK 88
           L+  LFIILSC++AV  N+SQ++CIGRF+AVSFQVLGHMKT+ VL +G++ F  E L   
Sbjct: 223 LTSTLFIILSCTIAVGTNLSQFICIGRFTAVSFQVLGHMKTILVLFMGFIFFGKEGLNLH 282

Query: 89  NIMGMVIAIAGMVVY-------------SWAMEAEKSANAKATP 119
            ++GM IAIAGM+ Y             S+++   K+ +  A P
Sbjct: 283 VVLGMAIAIAGMIWYGNASSKPGGKERRSFSLPTSKTQDYAAVP 326


>IMGA|Medtr1g124720.1 Protein of unknown function DUF250
           chr01_pseudomolecule_IMGAG_V3 27259547-27255214 E
           EGN_Mt090430 20090702
          Length = 320

 Score = 88.2 bits (217), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/98 (45%), Positives = 62/98 (63%), Gaps = 4/98 (4%)

Query: 33  QLFIILSCSLAVFCNVSQYLCIGRFSAVSFQVLGHMKTVCVLTLGWLLFDSE-LTFKNIM 91
            +F+ILSC++AV  N+SQ++CIGRF+AVSFQVLGHMKT+ VL +G+  F  E L    ++
Sbjct: 226 SMFLILSCTIAVGTNLSQFICIGRFTAVSFQVLGHMKTILVLIMGFFFFGREGLNLHVVI 285

Query: 92  GMVIAIAGMVVYSWAMEAEKSANAKATPHMKNSLTEEE 129
           GM+IA+ GM+   W   A      K    +  S TE  
Sbjct: 286 GMIIAVVGMM---WYGNASSKPGGKERWSLPTSKTESR 320


>IMGA|Medtr2g110080.1 Protein of unknown function DUF250
           chr02_pseudomolecule_IMGAG_V3 25715906-25719262 E
           EGN_Mt090430 20090702
          Length = 349

 Score = 74.7 bits (182), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 36/71 (50%), Positives = 50/71 (70%)

Query: 35  FIILSCSLAVFCNVSQYLCIGRFSAVSFQVLGHMKTVCVLTLGWLLFDSELTFKNIMGMV 94
           FIILSC +AV  N S +L IG+ S V++QVLGH+KT  V+  G+ L       +NI+G++
Sbjct: 225 FIILSCLIAVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVIGFGYTLLHDPFNGRNIIGIL 284

Query: 95  IAIAGMVVYSW 105
           IAI GMV+YS+
Sbjct: 285 IAIFGMVLYSY 295


>IMGA|Medtr5g103910.1 Protein of unknown function DUF250
           chr05_pseudomolecule_IMGAG_V3 41656808-41654113 E
           EGN_Mt090430 20090702
          Length = 385

 Score = 49.3 bits (116), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 3/101 (2%)

Query: 36  IILSCSLAVFCNVSQYLCIGRFSAVSFQVLGHMKTVCVLTLGWLLFDSELTFKNIMGMVI 95
           I++S  L      S  L +G  SA +  VLG  KT  +L  G+LLFDS+    +I G V+
Sbjct: 271 IMISALLGFLLQWSGALALGATSATTHVVLGQFKTCVILLGGYLLFDSDPGIVSIGGAVV 330

Query: 96  AIAGMVVY-SWAMEAEKSANAKATPHMKNSLTEEEIRLLKE 135
           A+ GM VY ++ ++  +   +K  P  K+SL   + +   E
Sbjct: 331 ALTGMSVYTTFNLQESQENTSKQLP--KHSLPSTQQKPASE 369


>IMGA|Medtr4g015300.1 Protein of unknown function DUF250
           chr04_pseudomolecule_IMGAG_V3 2789474-2786954 E
           EGN_Mt090430 20090702
          Length = 310

 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 44/70 (62%)

Query: 35  FIILSCSLAVFCNVSQYLCIGRFSAVSFQVLGHMKTVCVLTLGWLLFDSELTFKNIMGMV 94
           +++LS SLA F N++ +L     SA++ QVLG+ K    + +  L+F + ++   ++G V
Sbjct: 234 YLLLSSSLAYFVNLTNFLVTKYTSALTLQVLGNAKGAVAVVISILIFQNPVSMIGMLGYV 293

Query: 95  IAIAGMVVYS 104
           + I G+++YS
Sbjct: 294 LTIIGVILYS 303


>IMGA|Medtr3g097460.1 Protein of unknown function DUF250
           chr03_pseudomolecule_IMGAG_V3 23314363-23326168 E
           EGN_Mt090430 20090702
          Length = 340

 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 3/108 (2%)

Query: 34  LFIILSCSLAVFC-NVSQYLCIGRFSAVSFQVLGHMKTVCVLTLGWLLFDSELTFKNIMG 92
           L II S  +  FC N S +  I   +AV+F V G++K    + + WL+F + +++ N +G
Sbjct: 232 LIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISYLNAVG 291

Query: 93  MVIAIAGMVVYSWAME-AEKSANAKATPHMKNSLTEEEIRLLKEGVES 139
             I + G   Y +      +      TP    S   E + L+ + +E+
Sbjct: 292 CAITLVGCTFYGYVRHLLSQQPPVPGTPRTPRS-KMESLPLVNDKLEN 338