Jatropha Genome Database

JcCB0461221.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0461221.10 + phase: 2 /partial
         (270 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g099600.1 Glyceraldehyde-3-phosphate dehydrogenase, t...   430   e-121
IMGA|Medtr3g160060.1 Protein of unknown function CP12; Glycerald...   359   e-100
IMGA|Medtr3g103260.1 Glyceraldehyde-3-phosphate dehydrogenase, t...   234   5e-62
IMGA|Medtr2g077990.2 Glyceraldehyde-3-phosphate dehydrogenase, t...   229   8e-61
IMGA|Medtr2g077990.1 Glyceraldehyde-3-phosphate dehydrogenase, t...   229   1e-60
IMGA|Medtr8g109660.1 Glyceraldehyde-3-phosphate dehydrogenase, t...   224   4e-59

>IMGA|Medtr7g099600.1 Glyceraldehyde-3-phosphate dehydrogenase, type
           I chr07_pseudomolecule_IMGAG_V3 22250718-22247269 F
           EGN_Mt090430 20090702
          Length = 404

 Score =  430 bits (1105), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 217/270 (80%), Positives = 223/270 (82%)

Query: 1   ISVDGKVIKVVSDRNPVNLPWGGVGIDLVIEGTGVFVDRDGAGKHIQAGAKKVLITAPGK 60
           ISVDGKVIKVVSDRNP NLPWG +GIDLVIEGTGVFVDR+GAGKHI AGAKKVLITAPGK
Sbjct: 135 ISVDGKVIKVVSDRNPANLPWGELGIDLVIEGTGVFVDREGAGKHITAGAKKVLITAPGK 194

Query: 61  GDIPTYVVGVNADAYNPAEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ 120
           GDIPTYVVGVNAD Y+ A+ IISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ
Sbjct: 195 GDIPTYVVGVNADGYSHADDIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ 254

Query: 121 XXXXXXXXXXXXXXXXXXNIVPTSTGAAKAVALVLPTLKGKLNGIALRVPTPNXXXXXXX 180
                             NIVPTSTGAAKAVALVLP+LKGKLNGIALRVPTPN       
Sbjct: 255 RLLDASHRDLRRARAAALNIVPTSTGAAKAVALVLPSLKGKLNGIALRVPTPNVSVVDLV 314

Query: 181 XXXSKKTFAEEVNAAFRESADKELKGILSVCDEPLVSVDFRCXXXXXXXXXXLTMVMGDD 240
              SKKTFAEEVN AFR+SA KEL GILSVCDEPLVSVDFRC          LTMVMGDD
Sbjct: 315 VQVSKKTFAEEVNEAFRDSAAKELSGILSVCDEPLVSVDFRCTDVSSTVDSSLTMVMGDD 374

Query: 241 MVKVIAWYDNEWGYSQRVVDLADIVANNWK 270
           MVKVIAWYDNEWGYSQRVVDLADIVANNWK
Sbjct: 375 MVKVIAWYDNEWGYSQRVVDLADIVANNWK 404


>IMGA|Medtr3g160060.1 Protein of unknown function CP12;
           Glyceraldehyde-3-phosphate dehydrogenase, type I
           chr03_pseudomolecule_IMGAG_V3 42055909-42059863 F
           EGN_Mt090430 20090702
          Length = 451

 Score =  359 bits (922), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 186/272 (68%), Positives = 206/272 (75%), Gaps = 3/272 (1%)

Query: 1   ISVDGKVIKVVSDRNPVNLPWGGVGIDLVIEGTGVFVDRDGAGKHIQAGAKKVLITAPGK 60
           I+VDGK I VVS R+P+ LPW  +GID+VIEGTGVFVD  GAGKHIQAGAKKV+ITAP K
Sbjct: 151 ITVDGKPILVVSSRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAK 210

Query: 61  G-DIPTYVVGVNADAY-NPAEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTG 118
           G DIPTYVVGVN   Y +    IISNASCTTNCLAPFVK+LD++FGI+KGTMTTTHSYTG
Sbjct: 211 GADIPTYVVGVNEQDYGHEVADIISNASCTTNCLAPFVKILDEEFGIVKGTMTTTHSYTG 270

Query: 119 DQXXXXXXXXXXXXXXXXXXNIVPTSTGAAKAVALVLPTLKGKLNGIALRVPTPNXXXXX 178
           DQ                  NIVPTSTGAAKAV+LVLP LKGKLNGIALRVPTPN     
Sbjct: 271 DQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVLPQLKGKLNGIALRVPTPNVSVVD 330

Query: 179 XXXXXSKKTF-AEEVNAAFRESADKELKGILSVCDEPLVSVDFRCXXXXXXXXXXLTMVM 237
                +KK   AE+VNAAFR++A+  LKG+L VCD PLVSVDFRC          LTMVM
Sbjct: 331 LVVNVAKKGISAEDVNAAFRKAAEGPLKGVLDVCDVPLVSVDFRCTDVSSTIDSSLTMVM 390

Query: 238 GDDMVKVIAWYDNEWGYSQRVVDLADIVANNW 269
           GDDMVKV+AWYDNEWGYSQRVVDLA +VAN W
Sbjct: 391 GDDMVKVVAWYDNEWGYSQRVVDLAHLVANKW 422


>IMGA|Medtr3g103260.1 Glyceraldehyde-3-phosphate dehydrogenase, type
           I chr03_pseudomolecule_IMGAG_V3 25359130-25364058 E
           EGN_Mt090430 20090702
          Length = 340

 Score =  234 bits (596), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 120/257 (46%), Positives = 155/257 (60%), Gaps = 2/257 (0%)

Query: 6   KVIKVVSDRNPVNLPWGGVGIDLVIEGTGVFVDRDGAGKHIQAGAKKVLITAPGKGDIPT 65
           K + V   RNP  +PWG VG D VIE TGVF D+D A  H++ GAKKV+I+AP K D P 
Sbjct: 77  KEVAVFGTRNPEEIPWGEVGADYVIESTGVFTDKDKAAAHLKGGAKKVVISAPSK-DAPM 135

Query: 66  YVVGVNADAYNPAEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXX 125
           +VVGVN   Y P   I+SNASCTTNCLAP  KV++ +FGI++G MTT H+ T  Q     
Sbjct: 136 FVVGVNEKEYKPELNIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHAITATQKTVDG 195

Query: 126 XXXXX-XXXXXXXXNIVPTSTGAAKAVALVLPTLKGKLNGIALRVPTPNXXXXXXXXXXS 184
                         NI+P+STGAAKAV  VLP L GKL G++ RVPT +           
Sbjct: 196 PSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPVLNGKLTGMSFRVPTVDVSVVDLTVRLE 255

Query: 185 KKTFAEEVNAAFRESADKELKGILSVCDEPLVSVDFRCXXXXXXXXXXLTMVMGDDMVKV 244
           KK   EE+ AA +E ++ +LKGIL   ++ +VS DF              + + D+ VK+
Sbjct: 256 KKATYEEIKAAIKEESEGKLKGILGYTEDDVVSTDFIGDSRSSIFDAKAGIALNDNFVKL 315

Query: 245 IAWYDNEWGYSQRVVDL 261
           ++WYDNEWGYS RV+DL
Sbjct: 316 VSWYDNEWGYSTRVIDL 332


>IMGA|Medtr2g077990.2 Glyceraldehyde-3-phosphate dehydrogenase, type
           I chr02_pseudomolecule_IMGAG_V3 18112574-18118811 E
           EGN_Mt090430 20090702
          Length = 392

 Score =  229 bits (585), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 120/267 (44%), Positives = 159/267 (59%), Gaps = 2/267 (0%)

Query: 1   ISVDGKVIKVVSDRNPVNLPWGGVGIDLVIEGTGVFVDRDGAGKHIQAGAKKVLITAPGK 60
           + ++GK +KVVS R+PV +PWG  G D VIE +G+F   + A  H++AGAKK++I+AP  
Sbjct: 121 LEINGKQVKVVSKRDPVEIPWGDFGADYVIESSGIFTTLEKASSHLKAGAKKIIISAP-S 179

Query: 61  GDIPTYVVGVNADAYNPAEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ 120
            D P +VVGVN   YN    I+SNASCTTNCLAP  KV+ ++FGI++G MTT H+ T  Q
Sbjct: 180 ADAPMFVVGVNEKTYNSNMDIVSNASCTTNCLAPLAKVVHEEFGIVEGLMTTVHATTATQ 239

Query: 121 XXXXXXXXXX-XXXXXXXXNIVPTSTGAAKAVALVLPTLKGKLNGIALRVPTPNXXXXXX 179
                              NI+P+STGAAKAV  VLP L GKL G+A RVPT N      
Sbjct: 240 KTVDGPSMKDWRGGRGAAQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTANVSVVDL 299

Query: 180 XXXXSKKTFAEEVNAAFRESADKELKGILSVCDEPLVSVDFRCXXXXXXXXXXLTMVMGD 239
                K    E+V AA + +++ +LKGIL   DE +VS DF              + +  
Sbjct: 300 TCRLQKNASYEDVKAAIKLASEGQLKGILGYTDEDVVSNDFIGDSRSSIFDAKAGIGLSK 359

Query: 240 DMVKVIAWYDNEWGYSQRVVDLADIVA 266
             VK+++WYDNEWGYS RV+DL   +A
Sbjct: 360 SFVKLVSWYDNEWGYSNRVLDLVGHMA 386


>IMGA|Medtr2g077990.1 Glyceraldehyde-3-phosphate dehydrogenase, type
           I chr02_pseudomolecule_IMGAG_V3 18112574-18118811 E
           EGN_Mt090430 20090702
          Length = 418

 Score =  229 bits (584), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 119/262 (45%), Positives = 157/262 (59%), Gaps = 2/262 (0%)

Query: 1   ISVDGKVIKVVSDRNPVNLPWGGVGIDLVIEGTGVFVDRDGAGKHIQAGAKKVLITAPGK 60
           + ++GK +KVVS R+PV +PWG  G D VIE +G+F   + A  H++AGAKK++I+AP  
Sbjct: 147 LEINGKQVKVVSKRDPVEIPWGDFGADYVIESSGIFTTLEKASSHLKAGAKKIIISAP-S 205

Query: 61  GDIPTYVVGVNADAYNPAEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ 120
            D P +VVGVN   YN    I+SNASCTTNCLAP  KV+ ++FGI++G MTT H+ T  Q
Sbjct: 206 ADAPMFVVGVNEKTYNSNMDIVSNASCTTNCLAPLAKVVHEEFGIVEGLMTTVHATTATQ 265

Query: 121 XXXXXXXXXX-XXXXXXXXNIVPTSTGAAKAVALVLPTLKGKLNGIALRVPTPNXXXXXX 179
                              NI+P+STGAAKAV  VLP L GKL G+A RVPT N      
Sbjct: 266 KTVDGPSMKDWRGGRGAAQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTANVSVVDL 325

Query: 180 XXXXSKKTFAEEVNAAFRESADKELKGILSVCDEPLVSVDFRCXXXXXXXXXXLTMVMGD 239
                K    E+V AA + +++ +LKGIL   DE +VS DF              + +  
Sbjct: 326 TCRLQKNASYEDVKAAIKLASEGQLKGILGYTDEDVVSNDFIGDSRSSIFDAKAGIGLSK 385

Query: 240 DMVKVIAWYDNEWGYSQRVVDL 261
             VK+++WYDNEWGYS RV+DL
Sbjct: 386 SFVKLVSWYDNEWGYSNRVLDL 407


>IMGA|Medtr8g109660.1 Glyceraldehyde-3-phosphate dehydrogenase, type
           I chr08_pseudomolecule_IMGAG_V3 24655871-24652454 F
           EGN_Mt090430 20090702
          Length = 339

 Score =  224 bits (570), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 116/257 (45%), Positives = 152/257 (59%), Gaps = 2/257 (0%)

Query: 6   KVIKVVSDRNPVNLPWGGVGIDLVIEGTGVFVDRDGAGKHIQAGAKKVLITAPGKGDIPT 65
           K + V + RNP  +PW   G D+++E TGVF D+D A  H++ GAKKV+I+AP K D P 
Sbjct: 76  KPVTVFAHRNPEEIPWASTGADIIVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-DAPM 134

Query: 66  YVVGVNADAYNPAEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXX 125
           +VVGVN   Y P   IISNASCTTNCLAP  KV++ +FGI++G MTT HS T  Q     
Sbjct: 135 FVVGVNEKEYKPEFDIISNASCTTNCLAPLAKVINDRFGIVEGLMTTVHSITATQKTVDG 194

Query: 126 XXXXX-XXXXXXXXNIVPTSTGAAKAVALVLPTLKGKLNGIALRVPTPNXXXXXXXXXXS 184
                         NI+P+STGAAKAV  VLP L GKL G+A RVPT +           
Sbjct: 195 PSAKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVVDLTVRLE 254

Query: 185 KKTFAEEVNAAFRESADKELKGILSVCDEPLVSVDFRCXXXXXXXXXXLTMVMGDDMVKV 244
           K    +++ AA +E ++  LKGIL   ++ +VS DF              + + D+ VK+
Sbjct: 255 KPATYDQIKAAIKEESEGNLKGILGYTEDDVVSTDFIGDTRSSIFDAKAGIALNDNFVKL 314

Query: 245 IAWYDNEWGYSQRVVDL 261
           ++WYDNE GYS RVVDL
Sbjct: 315 VSWYDNELGYSTRVVDL 331