Jatropha Genome Database

JcCB0459841.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0459841.10 - phase: 0 
         (182 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g097000.1 Glycosyl transferase, family 29 chr07_pseud...   182   1e-46
IMGA|Medtr4g152010.1 Glycosyl transferase, family 29 chr04_pseud...    92   2e-19

>IMGA|Medtr7g097000.1 Glycosyl transferase, family 29
           chr07_pseudomolecule_IMGAG_V3 21855178-21848531 E
           EGN_Mt090430 20090702
          Length = 476

 Score =  182 bits (461), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 101/162 (62%), Positives = 119/162 (73%), Gaps = 5/162 (3%)

Query: 1   MRPYKNSNNSRRPAAVLHLLCVAAFFSIIVFAIQSSFFAGNRNSDL-NKEEIHTLSEFQF 59
           MR +K   ++ RP  +  +   A F  +++F IQSSFF+G+  SD  N E I  L +FQ 
Sbjct: 1   MRQHKQVASAARPKILYLVFAAAFFSLLLLFFIQSSFFSGSVFSDRRNSESIRDLFQFQS 60

Query: 60  SVQQCVANRGLGLTAHIVDHCKLTLKFPEGTNSTWYNAQFKIYEPLEYHYDVCDAILLWE 119
           +V+QCVANRGLGLTA I+DHC L LK+PEGTNSTWYN QFK +EPLEY YDVC+AILLWE
Sbjct: 61  TVKQCVANRGLGLTADIIDHCTLVLKYPEGTNSTWYNQQFKKFEPLEYTYDVCEAILLWE 120

Query: 120 QYRNMTTVLTREYLDARPDGWLDYAAKRIAQLYDVCGTFSCY 161
           QYRNMTTVLTREYLD RP GW+DYA  RIAQL    G   CY
Sbjct: 121 QYRNMTTVLTREYLDVRPGGWVDYAPLRIAQL----GAKKCY 158


>IMGA|Medtr4g152010.1 Glycosyl transferase, family 29
           chr04_pseudomolecule_IMGAG_V3 37561920-37557293 E
           EGN_Mt090430 20090702
          Length = 443

 Score = 92.0 bits (227), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 42/104 (40%), Positives = 64/104 (61%), Gaps = 1/104 (0%)

Query: 46  LNKEEIHTLSEFQFSVQQCVANRGLGL-TAHIVDHCKLTLKFPEGTNSTWYNAQFKIYEP 104
           L  EE  +L     S Q+CV+  GLGL  A   D+C+ T+ FP  T   W + +    E 
Sbjct: 37  LTDEEAESLLSLHNSFQKCVSANGLGLKAASSSDYCQTTISFPSDTIPKWKDPKTGELEA 96

Query: 105 LEYHYDVCDAILLWEQYRNMTTVLTREYLDARPDGWLDYAAKRI 148
           L + +++C+A+  WEQ RN TT+LT+E++D+ P+GW +YA +RI
Sbjct: 97  LSFDFNLCEAVATWEQVRNSTTILTKEFIDSLPNGWEEYAWRRI 140