Jatropha Genome Database

JcCB0456011.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0456011.10 + phase: 2 /pseudo/partial
         (429 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g038690.1 FAD-dependent pyridine nucleotide-disulphid...   219   3e-57
IMGA|Medtr8g137840.1 FAD-dependent pyridine nucleotide-disulphid...   216   2e-56

>IMGA|Medtr2g038690.1 FAD-dependent pyridine nucleotide-disulphide
           oxidoreductase chr02_pseudomolecule_IMGAG_V3
           10855937-10861933 E EGN_Mt090430 20090702
          Length = 568

 Score =  219 bits (557), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 144/406 (35%), Positives = 216/406 (53%), Gaps = 20/406 (4%)

Query: 27  HSFASHGVKFSSVEVDLPAMMGQKDKAVANLTRGIEGLFKKNKVTYVKGYGKFLSPSEVS 86
           H   S G++ S+   D  A+    +   + +   +    K   V  + G+G  L P +V 
Sbjct: 147 HHLKSLGIQVSNAGYDRQAVADHANNLASKIRGNLTNSMKALGVDILTGFGTILGPQKVK 206

Query: 87  VDTIDGGNTVVKGKNIIIATGSDVKSLP-GITIDEEKIVSSTGALALKEIPKKLVVIGAG 145
           + +    N VV  K+IIIATGS V  +P GI +D + +++S  AL L+ +P  + ++G+G
Sbjct: 207 IGS---SNNVVTAKDIIIATGS-VPFVPKGIEVDGKTVITSDHALKLETVPDWIAIVGSG 262

Query: 146 YIGLEMGSVWGRLGSEVTVVEFAPDIVPSMDGEIRKQFQRTL-EKQKMKFMLKTKVVGVD 204
           YIGLE   V+  LGSEVT VE    ++P  D EI K  QR L   + + +        + 
Sbjct: 263 YIGLEFSDVYTALGSEVTFVEALDQLMPGFDPEISKLAQRVLINPRNIDYHTGVFASKIT 322

Query: 205 TSGDG--VKLTLEPAAGGDQT-TLEADVVLVSAGRSPFTSGLGLDKIGVETDKVGRILVN 261
            + DG  V + L  A   +Q  TLE D  L++ GR+PFT GLGL+ I V T + G + V+
Sbjct: 323 PARDGKPVMIELIDAKTKEQKETLEVDAALIATGRAPFTQGLGLENIDVATQR-GFVPVD 381

Query: 262 ERF------ATNVPGVHAIGDVIPGPMLAHKAEEDGVACVEFIAGKQGHVDYDKVPGVVY 315
           ER          VP ++ IGD     MLAH A   G++ VE + G+   +++  +P   +
Sbjct: 382 ERMRVIDANGNLVPHLYCIGDANGKMMLAHAASAQGISVVEQVTGRDHVLNHLSIPAACF 441

Query: 316 THPEVASVGKTEEQVKAL----GVEYRVGKFPFLANSRAKAIDDAEGLVKILAEKETDKI 371
           THPE++ VG TE Q +      G +  + K  F AN++A A ++ EGL K++   +  +I
Sbjct: 442 THPEISMVGLTEPQAREKGEKEGFDVSIAKTSFKANTKALAENEGEGLAKLIYRPDNGEI 501

Query: 372 LGVHIMAPNAGELIHEAVLALTYDASSEDIARVCHAHPTMSEALKE 417
           LGVHI   +A +LIHEA  A+      +DI    HAHPT+SE L E
Sbjct: 502 LGVHIFGLHAADLIHEASNAIALGTHIQDIKFAVHAHPTLSEVLDE 547


>IMGA|Medtr8g137840.1 FAD-dependent pyridine nucleotide-disulphide
           oxidoreductase chr08_pseudomolecule_IMGAG_V3
           33095818-33103303 E EGN_Mt090430 20090702
          Length = 565

 Score =  216 bits (549), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 145/422 (34%), Positives = 219/422 (51%), Gaps = 22/422 (5%)

Query: 13  QALLHSSHMFHE--AQHSFASHGVKFSSVEVDLPAMMGQKDKAVANLTRGIEGLFKKNKV 70
           +ALL  S    E  + H   S G+  SS   D   +    +   + +   +    K   V
Sbjct: 128 KALLAVSGRMRELKSDHHLKSLGLHVSSSGYDRQGVADHANNLASKIRSNLTNSLKAIGV 187

Query: 71  TYVKGYGKFLSPSEVSVDTIDGGNTVVKGKNIIIATGSDVKSLP-GITIDEEKIVSSTGA 129
             + G+G  L P +V + +    N VV  K+IIIATGS V  +P G+ +D + +++S  A
Sbjct: 188 DILTGFGTILGPQKVKIGS---SNNVVTAKDIIIATGS-VPFVPKGVEVDGKTVITSDHA 243

Query: 130 LALKEIPKKLVVIGAGYIGLEMGSVWGRLGSEVTVVEFAPDIVPSMDGEIRKQFQRTL-E 188
           L L+ +P  + ++G+GYIGLE   V+  LGSEVT VE    ++P  D EI K  QR L  
Sbjct: 244 LKLESVPDWIAIVGSGYIGLEFSDVYTALGSEVTFVEALDQLMPGFDPEISKLAQRVLVN 303

Query: 189 KQKMKFMLKTKVVGVDTSGDGVKLTLE---PAAGGDQTTLEADVVLVSAGRSPFTSGLGL 245
            + + +        +  + DG  + +E         + TLE D  L++ GR+PFT GLGL
Sbjct: 304 PRNIDYHTGVFASKITPARDGKPVLIELIDAKTKEPKDTLEVDAALIATGRAPFTQGLGL 363

Query: 246 DKIGVETDKVGRILVNERF------ATNVPGVHAIGDVIPGPMLAHKAEEDGVACVEFIA 299
           + + V T + G + V+ER          VP ++ IGD     MLAH A   G++ VE + 
Sbjct: 364 ENVDVATQR-GFVPVDERMRVIDANGKLVPHLYCIGDANGKMMLAHAASAQGISVVEQVT 422

Query: 300 GKQGHVDYDKVPGVVYTHPEVASVGKTEEQVKAL----GVEYRVGKFPFLANSRAKAIDD 355
           G+   +++  +P   +THPE++ VG TE Q +      G +  V K  F AN++A A ++
Sbjct: 423 GRDHVLNHLSIPAACFTHPEISMVGLTEPQAREKGEKEGFDVSVAKTSFKANTKALAENE 482

Query: 356 AEGLVKILAEKETDKILGVHIMAPNAGELIHEAVLALTYDASSEDIARVCHAHPTMSEAL 415
            EGL K++   +  +ILGVHI   +A +LIHEA  A+      +DI    HAHPT+SE L
Sbjct: 483 GEGLAKLIYRPDNGEILGVHIFGLHAADLIHEASNAIALGTRIQDIKFAVHAHPTLSEVL 542

Query: 416 KE 417
            E
Sbjct: 543 DE 544