Jatropha Genome Database

JcCB0454511.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0454511.10 - phase: 0 /partial
         (165 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g009190.1 Dynamin central region; Dynamin; Dynamin GT...   302   6e-83
IMGA|AC235758_24.1 Dynamin central region; Dynamin; Dynamin GTPa...   277   2e-75
IMGA|Medtr8g009280.1 Dynamin central region; Dynamin; Dynamin GT...   183   4e-47
IMGA|Medtr8g009280.2 Dynamin central region; Dynamin; Dynamin GT...   182   6e-47
IMGA|Medtr4g156910.3 Dynamin GTPase effector chr04_pseudomolecul...   135   1e-32
IMGA|Medtr4g156900.1 Dynamin GTPase effector chr04_pseudomolecul...   119   1e-27
IMGA|Medtr4g156910.1 Dynamin central region; Dynamin; Dynamin GT...   115   7e-27
IMGA|Medtr4g156910.2 Dynamin central region; Dynamin chr04_pseud...    62   2e-10
IMGA|Medtr4g031780.1 Dynamin central region; Dynamin; Dynamin GT...    46   8e-06

>IMGA|Medtr5g009190.1 Dynamin central region; Dynamin; Dynamin
           GTPase effector chr05_pseudomolecule_IMGAG_V3
           1949615-1944184 E EGN_Mt090430 20090702
          Length = 611

 Score =  302 bits (773), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 141/165 (85%), Positives = 155/165 (93%)

Query: 1   ELKQYPALRVEVGNAAIESLDKMKEESRKATLKLVDMECSYLTVDFFRKLPQDVDKGGNP 60
           ELKQYP LRVEV NAA +SL++M+EES+K+TL+LVDMEC YLTVD+FRKLPQDVDKGGNP
Sbjct: 447 ELKQYPGLRVEVTNAASDSLERMREESKKSTLQLVDMECGYLTVDYFRKLPQDVDKGGNP 506

Query: 61  THSIFDRYNDSYLRRIGTTVLSYVNMVCATLRNSIPKSIVYCQVREAKRSLLDHFFTELG 120
           THSIFDRYNDSYLRRIG+TVLSYVNMVCA+LR+SIPKSIV+CQVREAKRSLLDHFF E+G
Sbjct: 507 THSIFDRYNDSYLRRIGSTVLSYVNMVCASLRHSIPKSIVHCQVREAKRSLLDHFFIEIG 566

Query: 121 KMEQKYLSSLLNEDPAVMERRAALAKRLELYRSAQAEIDTVAWSK 165
           K E K LSSLLNEDPAVMERR ALAKRLELYRSAQAEID+ AWSK
Sbjct: 567 KYESKRLSSLLNEDPAVMERRTALAKRLELYRSAQAEIDSAAWSK 611


>IMGA|AC235758_24.1 Dynamin central region; Dynamin; Dynamin GTPase
           effector AC235758.1 170271-163793 H EGN_Mt090430
           20090702
          Length = 620

 Score =  277 bits (708), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 128/163 (78%), Positives = 149/163 (91%)

Query: 1   ELKQYPALRVEVGNAAIESLDKMKEESRKATLKLVDMECSYLTVDFFRKLPQDVDKGGNP 60
           ELKQYP L+ E+G+AAIESL++MKEES+KATL LVDME  YLTV+FFRKLPQD +KGGNP
Sbjct: 455 ELKQYPTLKAELGSAAIESLERMKEESKKATLLLVDMEYGYLTVEFFRKLPQDAEKGGNP 514

Query: 61  THSIFDRYNDSYLRRIGTTVLSYVNMVCATLRNSIPKSIVYCQVREAKRSLLDHFFTELG 120
           T S+FDRYND+YLRRI TTVLSYVNMVC TLR++IPKS+VYCQVREAKRSLLDHFFT+LG
Sbjct: 515 TVSLFDRYNDAYLRRIATTVLSYVNMVCGTLRHTIPKSVVYCQVREAKRSLLDHFFTDLG 574

Query: 121 KMEQKYLSSLLNEDPAVMERRAALAKRLELYRSAQAEIDTVAW 163
           K E K L+SLLNEDPA+M+RR +LAKRLELYRSAQ++I+ VAW
Sbjct: 575 KKEGKQLASLLNEDPAIMQRRTSLAKRLELYRSAQSDIEAVAW 617


>IMGA|Medtr8g009280.1 Dynamin central region; Dynamin; Dynamin
           GTPase effector chr08_pseudomolecule_IMGAG_V3
           1289979-1297612 F EGN_Mt090430 20090702
          Length = 637

 Score =  183 bits (464), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 92/184 (50%), Positives = 128/184 (69%), Gaps = 21/184 (11%)

Query: 1   ELKQYPALRVEVGNAAIESLDKMKEESRKATLKLVDMECSYLTVDFFRKLPQDVDKGGNP 60
           EL+++P L+ E+  A  E+L++ ++ES+K T++LVDME SYLTVDFFR+LPQ+++K GNP
Sbjct: 452 ELRRFPTLQAELAAATTEALERFRDESKKTTIRLVDMEASYLTVDFFRRLPQEMEKAGNP 511

Query: 61  THSIF---------------------DRYNDSYLRRIGTTVLSYVNMVCATLRNSIPKSI 99
                                     DRY + + RRIG+ V SY+ MV  TLR +IPK++
Sbjct: 512 AQPTNPSNRGNSDQPTNPSNRAGINDDRYGEGHFRRIGSNVSSYIGMVSETLRVTIPKAV 571

Query: 100 VYCQVREAKRSLLDHFFTELGKMEQKYLSSLLNEDPAVMERRAALAKRLELYRSAQAEID 159
           VYCQVREAK+SLL+ F+T++GK E K LS +L+EDP VMERR    KRLELY++A+ EID
Sbjct: 572 VYCQVREAKQSLLNFFYTQIGKKEAKQLSDILDEDPTVMERRQQCFKRLELYKAARDEID 631

Query: 160 TVAW 163
           +V+W
Sbjct: 632 SVSW 635


>IMGA|Medtr8g009280.2 Dynamin central region; Dynamin; Dynamin
           GTPase effector chr08_pseudomolecule_IMGAG_V3
           1289979-1297612 F EGN_Mt090430 20090702
          Length = 467

 Score =  182 bits (463), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 92/184 (50%), Positives = 128/184 (69%), Gaps = 21/184 (11%)

Query: 1   ELKQYPALRVEVGNAAIESLDKMKEESRKATLKLVDMECSYLTVDFFRKLPQDVDKGGNP 60
           EL+++P L+ E+  A  E+L++ ++ES+K T++LVDME SYLTVDFFR+LPQ+++K GNP
Sbjct: 282 ELRRFPTLQAELAAATTEALERFRDESKKTTIRLVDMEASYLTVDFFRRLPQEMEKAGNP 341

Query: 61  THSIF---------------------DRYNDSYLRRIGTTVLSYVNMVCATLRNSIPKSI 99
                                     DRY + + RRIG+ V SY+ MV  TLR +IPK++
Sbjct: 342 AQPTNPSNRGNSDQPTNPSNRAGINDDRYGEGHFRRIGSNVSSYIGMVSETLRVTIPKAV 401

Query: 100 VYCQVREAKRSLLDHFFTELGKMEQKYLSSLLNEDPAVMERRAALAKRLELYRSAQAEID 159
           VYCQVREAK+SLL+ F+T++GK E K LS +L+EDP VMERR    KRLELY++A+ EID
Sbjct: 402 VYCQVREAKQSLLNFFYTQIGKKEAKQLSDILDEDPTVMERRQQCFKRLELYKAARDEID 461

Query: 160 TVAW 163
           +V+W
Sbjct: 462 SVSW 465


>IMGA|Medtr4g156910.3 Dynamin GTPase effector
           chr04_pseudomolecule_IMGAG_V3 38973287-38964423 E
           EGN_Mt090430 20090702
          Length = 113

 Score =  135 bits (339), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 55/98 (56%), Positives = 85/98 (86%)

Query: 66  DRYNDSYLRRIGTTVLSYVNMVCATLRNSIPKSIVYCQVREAKRSLLDHFFTELGKMEQK 125
           D + D++LR+IG+ V +Y+NMVC TL+N+IPK++V+CQVREAKRSLL++F+ ++GK E++
Sbjct: 15  DNFTDNHLRKIGSNVSAYINMVCDTLKNTIPKAVVHCQVREAKRSLLNYFYVQVGKKEKE 74

Query: 126 YLSSLLNEDPAVMERRAALAKRLELYRSAQAEIDTVAW 163
            L ++L+EDP++ME+R  +AKRLELY+ A+ +ID+VAW
Sbjct: 75  KLGAMLDEDPSLMEKRNQIAKRLELYKQARDDIDSVAW 112


>IMGA|Medtr4g156900.1 Dynamin GTPase effector
           chr04_pseudomolecule_IMGAG_V3 38966203-38964423 E
           EGN_Mt090430 20090702
          Length = 90

 Score =  119 bits (297), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 49/86 (56%), Positives = 75/86 (87%)

Query: 78  TTVLSYVNMVCATLRNSIPKSIVYCQVREAKRSLLDHFFTELGKMEQKYLSSLLNEDPAV 137
           + V +Y+NMVC TL+N+IPK++V+CQVREAKRSLL++F+ ++GK E++ L ++L+EDP++
Sbjct: 4   SNVSAYINMVCDTLKNTIPKAVVHCQVREAKRSLLNYFYVQVGKKEKEKLGAMLDEDPSL 63

Query: 138 MERRAALAKRLELYRSAQAEIDTVAW 163
           ME+R  +AKRLELY+ A+ +ID+VAW
Sbjct: 64  MEKRNQIAKRLELYKQARDDIDSVAW 89


>IMGA|Medtr4g156910.1 Dynamin central region; Dynamin; Dynamin
           GTPase effector chr04_pseudomolecule_IMGAG_V3
           38973287-38965071 E EGN_Mt090430 20090702
          Length = 552

 Score =  115 bits (289), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 54/123 (43%), Positives = 86/123 (69%), Gaps = 11/123 (8%)

Query: 1   ELKQYPALRVEVGNAAIESLDKMKEESRKATLKLVDMECSYLTVDFFRKLPQDVDKGGNP 60
           EL+++P L  ++  AA E+LDK ++ES+K   +LVDME          ++   +  G  P
Sbjct: 440 ELRRFPTLSNDIATAANEALDKFRDESKKTVTRLVDMET---------QMDHQIQTGMLP 490

Query: 61  THSIFDRYNDSYLRRIGTTVLSYVNMVCATLRNSIPKSIVYCQVREAKRSLLDHFFTELG 120
            ++  D + D++LR+IG+ V +Y+NMVC TL+N+IPK++V+CQVREAKRSLL++F+ ++G
Sbjct: 491 PNN--DNFTDNHLRKIGSNVSAYINMVCDTLKNTIPKAVVHCQVREAKRSLLNYFYVQVG 548

Query: 121 KME 123
           K E
Sbjct: 549 KKE 551


>IMGA|Medtr4g156910.2 Dynamin central region; Dynamin
           chr04_pseudomolecule_IMGAG_V3 38973287-38966205 E
           EGN_Mt090430 20090702
          Length = 511

 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 42/59 (71%)

Query: 1   ELKQYPALRVEVGNAAIESLDKMKEESRKATLKLVDMECSYLTVDFFRKLPQDVDKGGN 59
           EL+++P L  ++  AA E+LDK ++ES+K   +LVDME SYLT +FFRK+  + +K  N
Sbjct: 440 ELRRFPTLSNDIATAANEALDKFRDESKKTVTRLVDMESSYLTAEFFRKIHLEPEKNPN 498


>IMGA|Medtr4g031780.1 Dynamin central region; Dynamin; Dynamin
           GTPase effector; Pleckstrin homology-type
           chr04_pseudomolecule_IMGAG_V3 7399390-7384264 E
           EGN_Mt090430 20090702
          Length = 922

 Score = 46.2 bits (108), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 10/90 (11%)

Query: 62  HSIFDRYNDSYLRR----------IGTTVLSYVNMVCATLRNSIPKSIVYCQVREAKRSL 111
           HS+ D   D+  RR          +   V  YV  V  +L  ++PK++V CQV +AK  +
Sbjct: 721 HSLSDGSLDTMARRPADPEEELRWMSQEVRGYVEAVLNSLAANVPKAVVLCQVEKAKEDM 780

Query: 112 LDHFFTELGKMEQKYLSSLLNEDPAVMERR 141
           L+  ++ +       +  LL ED  V  RR
Sbjct: 781 LNQLYSSVSGQSTAKIEELLLEDQNVKRRR 810