Jatropha Genome Database

JcCB0453991.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0453991.10 - phase: 0 
         (133 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g020810.1 Glycoside hydrolase, catalytic core chr05_p...   134   1e-32
IMGA|Medtr4g118100.1 hypothetical protein chr04_pseudomolecule_I...   113   2e-26
IMGA|Medtr4g118250.1 Glycoside hydrolase, family 5 chr04_pseudom...   111   1e-25
IMGA|Medtr1g103510.1 Mannan endo-1,4-beta-mannosidase 4 precurso...   110   2e-25
IMGA|Medtr1g103530.1 NADH/Ubiquinone/plastoquinone (complex I) c...   109   3e-25
IMGA|Medtr1g103540.1 Mannan endo-1,4-beta-mannosidase 4 precurso...   109   5e-25
IMGA|AC235094_8.1 Glycoside hydrolase, family 5 AC235094.1 41278...   108   9e-25
IMGA|Medtr8g005200.1 Glycoside hydrolase, family 5 chr08_pseudom...   100   2e-22
IMGA|Medtr8g005480.1 Glycoside hydrolase, family 5 chr08_pseudom...   100   3e-22
IMGA|Medtr4g107960.1 Glycoside hydrolase, family 5 chr04_pseudom...    88   1e-18

>IMGA|Medtr5g020810.1 Glycoside hydrolase, catalytic core
           chr05_pseudomolecule_IMGAG_V3 7872320-7875527 E
           EGN_Mt090430 20090702
          Length = 438

 Score =  134 bits (338), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 63/109 (57%), Positives = 83/109 (76%), Gaps = 1/109 (0%)

Query: 1   MKSWCLILFVVLMVHKQGSFVQVKAE-DGFVTTKGVQFMLNGSPFYANGFNAYWLMYFAN 59
           MK +  +  + ++VH++   + V+A  DGFV T+G+ FMLNG+P+YANGFNAYWLMY A+
Sbjct: 2   MKHFAWLFLLAILVHQECFNINVEAAGDGFVRTRGIHFMLNGNPYYANGFNAYWLMYTAS 61

Query: 60  DPSTRNKVSSVFQEAKAHGLALARTWAFNDGQDRALQYSPGSYNEQAFQ 108
           DPS R KVS+ F+EA +HGL +ARTWAF+DG    LQYSPG YNEQ F+
Sbjct: 62  DPSQRFKVSNAFREATSHGLTVARTWAFSDGGYSPLQYSPGFYNEQMFK 110


>IMGA|Medtr4g118100.1 hypothetical protein
           chr04_pseudomolecule_IMGAG_V3 27319908-27319564 H
           EGN_Mt090430 20090702
          Length = 114

 Score =  113 bits (283), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 59/114 (51%), Positives = 75/114 (65%), Gaps = 5/114 (4%)

Query: 1   MKSWCLILFVVLMVHKQGSFVQVKAED-----GFVTTKGVQFMLNGSPFYANGFNAYWLM 55
           M S    LF + MV    S +  +A        FV  KG +FMLNGSPF  NGFN+YW+M
Sbjct: 1   MTSIIKNLFSIYMVFHLISTLACEARSLRVTPNFVQRKGTEFMLNGSPFLFNGFNSYWMM 60

Query: 56  YFANDPSTRNKVSSVFQEAKAHGLALARTWAFNDGQDRALQYSPGSYNEQAFQV 109
             A+DP+ R +VS+VFQ+A A GL + RTWAF+DG +++LQ SPG YNEQ FQV
Sbjct: 61  NVASDPNQRYRVSNVFQKASAAGLTICRTWAFSDGGNQSLQISPGLYNEQMFQV 114


>IMGA|Medtr4g118250.1 Glycoside hydrolase, family 5
           chr04_pseudomolecule_IMGAG_V3 27429650-27427419 E
           EGN_Mt090430 20090702
          Length = 411

 Score =  111 bits (277), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 58/113 (51%), Positives = 74/113 (65%), Gaps = 5/113 (4%)

Query: 1   MKSWCLILFVVLMVHKQGSFVQVKAED-----GFVTTKGVQFMLNGSPFYANGFNAYWLM 55
           M S    LF + MV    S +  +A        FV  KG +FMLNGSPF  NGFN+YW+M
Sbjct: 1   MTSIIKNLFSIYMVFHLISTLACEARSLRVTPNFVQRKGTEFMLNGSPFLFNGFNSYWMM 60

Query: 56  YFANDPSTRNKVSSVFQEAKAHGLALARTWAFNDGQDRALQYSPGSYNEQAFQ 108
             A+DP+ R +VS+VFQ+A A GL + RTWAF+DG +++LQ SPG YNEQ FQ
Sbjct: 61  NVASDPNQRYRVSNVFQKASAAGLTICRTWAFSDGGNQSLQISPGLYNEQMFQ 113


>IMGA|Medtr1g103510.1 Mannan endo-1,4-beta-mannosidase 4 precursor,
           putative chr01_pseudomolecule_IMGAG_V3 21573797-21581692
           E EGN_Mt090430 20090702
          Length = 471

 Score =  110 bits (275), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 51/100 (51%), Positives = 68/100 (68%)

Query: 9   FVVLMVHKQGSFVQVKAEDGFVTTKGVQFMLNGSPFYANGFNAYWLMYFANDPSTRNKVS 68
           ++ L++ + G+  +V    GFV  KG  F+LNG   Y NGFN+YWLM  A+DPST +KV+
Sbjct: 82  YLALVIFQHGNSKRVNVGGGFVQRKGTHFILNGKTHYVNGFNSYWLMIMASDPSTSSKVT 141

Query: 69  SVFQEAKAHGLALARTWAFNDGQDRALQYSPGSYNEQAFQ 108
           S FQ+A  HGL + RTWA NDG  +ALQ SPG Y+E  F+
Sbjct: 142 SNFQQASRHGLNVGRTWACNDGGYKALQISPGKYDENVFR 181


>IMGA|Medtr1g103530.1 NADH/Ubiquinone/plastoquinone (complex I)
           chr01_pseudomolecule_IMGAG_V3 21596629-21600691 H
           EGN_Mt090430 20090702
          Length = 505

 Score =  109 bits (273), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 53/101 (52%), Positives = 66/101 (65%)

Query: 8   LFVVLMVHKQGSFVQVKAEDGFVTTKGVQFMLNGSPFYANGFNAYWLMYFANDPSTRNKV 67
             V L V + G+  +V    GFV  KG+ F++NG   Y NGFN++WLM  A D STR KV
Sbjct: 10  FLVTLAVIQHGNTQKVNVGVGFVQRKGIHFLMNGKTHYVNGFNSHWLMIMAADLSTRPKV 69

Query: 68  SSVFQEAKAHGLALARTWAFNDGQDRALQYSPGSYNEQAFQ 108
           +S FQ+A  HGL + RTWAFNDG  +ALQ SPG Y+E  FQ
Sbjct: 70  TSAFQQASQHGLNVGRTWAFNDGGYKALQISPGFYDETVFQ 110


>IMGA|Medtr1g103540.1 Mannan endo-1,4-beta-mannosidase 4 precursor,
           putative chr01_pseudomolecule_IMGAG_V3 21602207-21604359
           H EGN_Mt090430 20090702
          Length = 402

 Score =  109 bits (272), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 54/104 (51%), Positives = 67/104 (64%), Gaps = 2/104 (1%)

Query: 5   CLILFVVLMVHKQGSFVQVKAEDGFVTTKGVQFMLNGSPFYANGFNAYWLMYFANDPSTR 64
            L  F+V +   Q   V    + GFV  KG  F+LNG   Y NGFN+YWL   A+DPST 
Sbjct: 7   VLTYFLVALAVIQ--HVGANIDAGFVQRKGTHFILNGKTHYVNGFNSYWLTTMASDPSTS 64

Query: 65  NKVSSVFQEAKAHGLALARTWAFNDGQDRALQYSPGSYNEQAFQ 108
           +KV+S FQ+A  HGL + RTWAFNDG  +ALQ SPGSY+E  F+
Sbjct: 65  SKVTSTFQQASQHGLNVGRTWAFNDGGYKALQISPGSYDENVFK 108


>IMGA|AC235094_8.1 Glycoside hydrolase, family 5 AC235094.1
           41278-38255 E EGN_Mt090430 20090702
          Length = 429

 Score =  108 bits (269), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 51/83 (61%), Positives = 63/83 (75%)

Query: 26  EDGFVTTKGVQFMLNGSPFYANGFNAYWLMYFANDPSTRNKVSSVFQEAKAHGLALARTW 85
           E+GFV  K   F+LNG P Y NGFN+Y+LM  A+DPST +KV++ FQEA  +GL LARTW
Sbjct: 59  ENGFVQRKETSFVLNGKPLYLNGFNSYFLMIVASDPSTMSKVTTTFQEASQNGLNLARTW 118

Query: 86  AFNDGQDRALQYSPGSYNEQAFQ 108
           AFNDG  +ALQ SPGSY+E  F+
Sbjct: 119 AFNDGGYKALQISPGSYDEVIFK 141


>IMGA|Medtr8g005200.1 Glycoside hydrolase, family 5
           chr08_pseudomolecule_IMGAG_V3 123372-120703 E
           EGN_Mt090430 20090702
          Length = 483

 Score =  100 bits (249), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 48/85 (56%), Positives = 59/85 (69%)

Query: 24  KAEDGFVTTKGVQFMLNGSPFYANGFNAYWLMYFANDPSTRNKVSSVFQEAKAHGLALAR 83
           +AE   V  KG QF++N  PFY NGFN YWLM FA D STR +V+ VF+ A + G+ + R
Sbjct: 81  EAEWQMVQKKGNQFVVNDQPFYVNGFNTYWLMVFAADESTRGRVTQVFKHASSVGMTVCR 140

Query: 84  TWAFNDGQDRALQYSPGSYNEQAFQ 108
           TWAFNDGQ RALQ SP  Y+E  F+
Sbjct: 141 TWAFNDGQWRALQKSPSLYDEVVFK 165


>IMGA|Medtr8g005480.1 Glycoside hydrolase, family 5
           chr08_pseudomolecule_IMGAG_V3 291382-294051 E
           EGN_Mt090430 20090702
          Length = 463

 Score =  100 bits (248), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 48/85 (56%), Positives = 59/85 (69%)

Query: 24  KAEDGFVTTKGVQFMLNGSPFYANGFNAYWLMYFANDPSTRNKVSSVFQEAKAHGLALAR 83
           +AE   V  KG QF++N  PFY NGFN YWLM FA D STR +V+ VF+ A + G+ + R
Sbjct: 61  EAEWQMVQKKGNQFVVNDQPFYVNGFNTYWLMVFAADESTRGRVTQVFKHASSVGMTVCR 120

Query: 84  TWAFNDGQDRALQYSPGSYNEQAFQ 108
           TWAFNDGQ RALQ SP  Y+E  F+
Sbjct: 121 TWAFNDGQWRALQKSPSLYDEVVFK 145


>IMGA|Medtr4g107960.1 Glycoside hydrolase, family 5
           chr04_pseudomolecule_IMGAG_V3 23720889-23717166 E
           EGN_Mt090430 20090702
          Length = 427

 Score = 87.8 bits (216), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/83 (49%), Positives = 53/83 (63%)

Query: 26  EDGFVTTKGVQFMLNGSPFYANGFNAYWLMYFANDPSTRNKVSSVFQEAKAHGLALARTW 85
           E  FV  KG QF+L+G  FY NG+N+YW M  + D  TR +V  + +     GL + RTW
Sbjct: 35  ELSFVERKGSQFVLDGKAFYINGWNSYWFMVQSVDAYTRPRVGEMLKAGAKMGLTVCRTW 94

Query: 86  AFNDGQDRALQYSPGSYNEQAFQ 108
           AFNDG   ALQ SPG ++EQAF+
Sbjct: 95  AFNDGDYNALQTSPGVFDEQAFK 117