Jatropha Genome Database

JcCB0453971.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0453971.10 + phase: 2 /partial
         (132 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g136440.1 Glycosyl transferase, family 20 chr04_pseud...   185   5e-48
IMGA|Medtr4g156760.1 Glycosyl transferase, family 20; Trehalose-...    87   2e-18
IMGA|Medtr4g110050.1 Glycosyl transferase, family 20; Trehalose-...    85   1e-17
IMGA|Medtr8g127910.1 Glycosyl transferase, family 20; Trehalose-...    71   2e-13
IMGA|Medtr4g136450.1 Glycosyl transferase, family 20; Trehalose-...    66   5e-12

>IMGA|Medtr4g136440.1 Glycosyl transferase, family 20
           chr04_pseudomolecule_IMGAG_V3 33319328-33321440 E
           EGN_Mt090430 20090702
          Length = 380

 Score =  185 bits (470), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 90/108 (83%), Positives = 96/108 (88%)

Query: 1   PEGVEDQGKLTRVAAFPIGIDSERFIRALELPQVQDHMEELKERFAGRKVILGVDRLDTI 60
           PEGVEDQGKLTRVAAFPIGIDSERFIRAL LP+VQ HM++LKERFAGRKVI+GVDRLD I
Sbjct: 195 PEGVEDQGKLTRVAAFPIGIDSERFIRALALPEVQTHMKDLKERFAGRKVIMGVDRLDMI 254

Query: 61  KGIPQKILAFEEFLEENPEWRDKVVLLQIAVPTRTDVPEYQKLTSQVH 108
           KGIPQKILAFE+FLEEN  WRDKVVLLQIAVPTRTDVPE     +  H
Sbjct: 255 KGIPQKILAFEKFLEENSHWRDKVVLLQIAVPTRTDVPESTGTLASTH 302


>IMGA|Medtr4g156760.1 Glycosyl transferase, family 20;
           Trehalose-phosphatase chr04_pseudomolecule_IMGAG_V3
           38909254-38913290 E EGN_Mt090430 20090702
          Length = 838

 Score = 87.4 bits (215), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 44/119 (36%), Positives = 70/119 (58%), Gaps = 2/119 (1%)

Query: 3   GVEDQGKLTRVAAFPIGIDSERFIRALELPQVQDHMEELKERFA--GRKVILGVDRLDTI 60
           G+E  G+   +   P+GI   +    L LP+ ++ + EL ++F+  G+ ++LGVD  D  
Sbjct: 294 GIEYYGRTVSIKILPVGIHMGQLQSVLSLPKTEEKVSELIQQFSNNGKIMLLGVDDTDIF 353

Query: 61  KGIPQKILAFEEFLEENPEWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFG 119
           KGI  K+LA E+ L ++PEW  KVVL+QIA P R    + +++ ++      RIN RFG
Sbjct: 354 KGISLKLLAMEQLLIQHPEWHGKVVLVQIANPARGKGKDVKEVQAETKATAKRINERFG 412


>IMGA|Medtr4g110050.1 Glycosyl transferase, family 20;
           Trehalose-phosphatase chr04_pseudomolecule_IMGAG_V3
           24795728-24789797 E EGN_Mt090430 20090702
          Length = 861

 Score = 84.7 bits (208), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 42/124 (33%), Positives = 68/124 (54%)

Query: 3   GVEDQGKLTRVAAFPIGIDSERFIRALELPQVQDHMEELKERFAGRKVILGVDRLDTIKG 62
           G+E  G+   +   P+GI   R    + +   +    ELK++F G+ ++LG+D +D  KG
Sbjct: 296 GLEYYGRTISIKIMPVGIHMGRIESVMRMSDEECKARELKQQFEGKTILLGIDDMDIFKG 355

Query: 63  IPQKILAFEEFLEENPEWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLT 122
           I  KILA E+ L+++P+W+ + VL+QI  P R       ++ S++ E   RIN  FG   
Sbjct: 356 INLKILAMEQMLKQHPKWQGRAVLVQIVNPARGKGIHVDEIHSEIEESCSRINRVFGRPG 415

Query: 123 AVPI 126
             PI
Sbjct: 416 YEPI 419


>IMGA|Medtr8g127910.1 Glycosyl transferase, family 20;
           Trehalose-phosphatase chr08_pseudomolecule_IMGAG_V3
           29709106-29712406 E EGN_Mt090430 20090702
          Length = 829

 Score = 70.9 bits (172), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/117 (34%), Positives = 60/117 (51%)

Query: 3   GVEDQGKLTRVAAFPIGIDSERFIRALELPQVQDHMEELKERFAGRKVILGVDRLDTIKG 62
           GV+  G+   +   P+GI        L   +    ++ELKE F G+ +ILGVD LD  KG
Sbjct: 271 GVDYFGRNVTIKILPVGIHMGLLELVLSSSETAKRVKELKEEFEGKVLILGVDDLDLFKG 330

Query: 63  IPQKILAFEEFLEENPEWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFG 119
           I  K LA    LE N + R +VVL+QI    R+   + Q +  ++  I   +N ++G
Sbjct: 331 IGLKFLALRNLLEGNEKLRGEVVLVQILNQARSSGKDIQDVKFEIEAIAKEVNDKYG 387


>IMGA|Medtr4g136450.1 Glycosyl transferase, family 20;
           Trehalose-phosphatase chr04_pseudomolecule_IMGAG_V3
           33321734-33328266 E EGN_Mt090430 20090702
          Length = 522

 Score = 66.2 bits (160), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 29/31 (93%), Positives = 31/31 (100%)

Query: 99  EYQKLTSQVHEIVGRINGRFGTLTAVPIHHL 129
           ++QKLTSQVHEIVGRINGRFGTLTAVPIHHL
Sbjct: 3   KHQKLTSQVHEIVGRINGRFGTLTAVPIHHL 33