Jatropha Genome Database

JcCB0451941.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0451941.10 - phase: 2 /partial
         (82 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g009800.1 Glycosyl transferase, family 31 chr05_pseud...    70   4e-13
IMGA|Medtr3g124840.1 Glycosyl transferase, family 31 chr03_pseud...    67   3e-12
IMGA|Medtr2g104140.1 Glycosyl transferase, family 31 chr02_pseud...    59   6e-10
IMGA|Medtr4g041310.1 Glycosyl transferase, family 31 chr04_pseud...    53   3e-08

>IMGA|Medtr5g009800.1 Glycosyl transferase, family 31
           chr05_pseudomolecule_IMGAG_V3 2234534-2228247 H
           EGN_Mt090430 20090702
          Length = 360

 Score = 69.7 bits (169), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 28/47 (59%), Positives = 37/47 (78%)

Query: 24  LSKNLAQYININSASLKTYAHDDISIGSWMMGLQATYIDDNRLCCSS 70
           +SK LAQ+I+IN   L+TYAHDD+S GSW +GL   +ID+N+ CCSS
Sbjct: 255 ISKALAQFISINRFILRTYAHDDVSTGSWFIGLDVMHIDENKFCCSS 301


>IMGA|Medtr3g124840.1 Glycosyl transferase, family 31
           chr03_pseudomolecule_IMGAG_V3 31802727-31797534 E
           EGN_Mt090430 20090702
          Length = 205

 Score = 66.6 bits (161), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 42/58 (72%)

Query: 21  LLILSKNLAQYININSASLKTYAHDDISIGSWMMGLQATYIDDNRLCCSSIKQGELAA 78
           + ++S+ LA++I+IN + L+TYAHDD+S GSW +GL   ++D+ + CCSS   G + A
Sbjct: 146 MYVISRALAKFISINRSILRTYAHDDVSAGSWFIGLDVKHVDEAKFCCSSWSTGAICA 203


>IMGA|Medtr2g104140.1 Glycosyl transferase, family 31
           chr02_pseudomolecule_IMGAG_V3 24481631-24485895 E
           EGN_Mt090430 20090702
          Length = 402

 Score = 58.9 bits (141), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 24/50 (48%), Positives = 34/50 (68%)

Query: 21  LLILSKNLAQYININSASLKTYAHDDISIGSWMMGLQATYIDDNRLCCSS 70
           L  +SK+LA YI  N   L  YA++D+S+G+W +GL   +IDD RLCC +
Sbjct: 303 LYAVSKDLATYIATNKNVLHKYANEDVSLGAWFIGLDVEHIDDRRLCCGT 352


>IMGA|Medtr4g041310.1 Glycosyl transferase, family 31
           chr04_pseudomolecule_IMGAG_V3 9729521-9727053 E
           EGN_Mt090430 20090702
          Length = 256

 Score = 53.1 bits (126), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 18/47 (38%), Positives = 36/47 (76%)

Query: 24  LSKNLAQYININSASLKTYAHDDISIGSWMMGLQATYIDDNRLCCSS 70
           +S++LA YI+ N   L  YA++D+S+G+W++GL+  ++D+  +CC++
Sbjct: 152 ISRDLADYISSNWPILHRYANEDVSLGAWLLGLEVEHVDERSMCCAT 198