Jatropha Genome Database

JcCB0446791.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0446791.10 + phase: 0 /partial
         (127 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g157910.1 Phosphoglucomutase/phosphomannomutase alpha...   237   1e-63
IMGA|Medtr4g157910.2 Phosphoglucomutase/phosphomannomutase alpha...   236   2e-63
IMGA|Medtr1g129920.2 Phosphoglucomutase/phosphomannomutase alpha...   127   1e-30
IMGA|Medtr1g129920.1 Phosphoglucomutase/phosphomannomutase alpha...   127   2e-30

>IMGA|Medtr4g157910.1 Phosphoglucomutase/phosphomannomutase
           alpha/beta/alpha domain I; chr04_pseudomolecule_IMGAG_V3
           39477315-39469380 E EGN_Mt090430 20090702
          Length = 638

 Score =  237 bits (604), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 114/128 (89%), Positives = 123/128 (96%), Gaps = 1/128 (0%)

Query: 1   MSAANGVRRVWVGQNGLLSTPAVSAVIRERVGVDGSKATGAFILTASHNPGGPHEDFGIK 60
           M+AANGVRR+WVG NGLLSTPAVSAVIRERVGVDGSKATGAFILTASHNPGGP+EDFGIK
Sbjct: 134 MAAANGVRRIWVGLNGLLSTPAVSAVIRERVGVDGSKATGAFILTASHNPGGPNEDFGIK 193

Query: 61  YNMENGGPAPEGITDKIYENTKTIKEYLIA-DLPNVDISAIGVSNFSGPEGPFDVEVFDS 119
           YNMENGGPAPEGIT+KIYE T TIKEYLIA DLPNVDI+ +GV+NF+GPEGPFDVEVFDS
Sbjct: 194 YNMENGGPAPEGITNKIYEYTTTIKEYLIAPDLPNVDITTVGVTNFTGPEGPFDVEVFDS 253

Query: 120 ASDYVKLM 127
           ASDY+KLM
Sbjct: 254 ASDYIKLM 261


>IMGA|Medtr4g157910.2 Phosphoglucomutase/phosphomannomutase
           alpha/beta/alpha domain II chr04_pseudomolecule_IMGAG_V3
           39476799-39469380 E EGN_Mt090430 20090702
          Length = 582

 Score =  236 bits (603), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 114/128 (89%), Positives = 123/128 (96%), Gaps = 1/128 (0%)

Query: 1   MSAANGVRRVWVGQNGLLSTPAVSAVIRERVGVDGSKATGAFILTASHNPGGPHEDFGIK 60
           M+AANGVRR+WVG NGLLSTPAVSAVIRERVGVDGSKATGAFILTASHNPGGP+EDFGIK
Sbjct: 78  MAAANGVRRIWVGLNGLLSTPAVSAVIRERVGVDGSKATGAFILTASHNPGGPNEDFGIK 137

Query: 61  YNMENGGPAPEGITDKIYENTKTIKEYLIA-DLPNVDISAIGVSNFSGPEGPFDVEVFDS 119
           YNMENGGPAPEGIT+KIYE T TIKEYLIA DLPNVDI+ +GV+NF+GPEGPFDVEVFDS
Sbjct: 138 YNMENGGPAPEGITNKIYEYTTTIKEYLIAPDLPNVDITTVGVTNFTGPEGPFDVEVFDS 197

Query: 120 ASDYVKLM 127
           ASDY+KLM
Sbjct: 198 ASDYIKLM 205


>IMGA|Medtr1g129920.2 Phosphoglucomutase/phosphomannomutase
           alpha/beta/alpha domain II chr01_pseudomolecule_IMGAG_V3
           29112700-29119131 E EGN_Mt090430 20090702
          Length = 622

 Score =  127 bits (319), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 67/127 (52%), Positives = 88/127 (69%), Gaps = 16/127 (12%)

Query: 1   MSAANGVRRVWVGQNGLLSTPAVSAVIRERVGVDGSKATGAFILTASHNPGGPHEDFGIK 60
           ++A NGV ++ VG+ G+LSTPAVSA            A G FI++ASHNPGGP  D+GIK
Sbjct: 146 IAAGNGVGKILVGKEGILSTPAVSA------------ANGGFIMSASHNPGGPEYDWGIK 193

Query: 61  YNMENGGPAPEGITDKIYENTKTIKEYLIADLPNVDISAIGVSNFSGPEGPFDVEVFDSA 120
           +N  +G PAPE ITDKIY NT +I E  IAD+P+VD+S +GV+ F    G F+VEV D  
Sbjct: 194 FNYSSGQPAPESITDKIYGNTLSISEIKIADIPDVDLSNVGVTKF----GSFNVEVIDPV 249

Query: 121 SDYVKLM 127
           SDY++L+
Sbjct: 250 SDYLELL 256


>IMGA|Medtr1g129920.1 Phosphoglucomutase/phosphomannomutase
           alpha/beta/alpha domain II chr01_pseudomolecule_IMGAG_V3
           29112700-29119131 E EGN_Mt090430 20090702
          Length = 625

 Score =  127 bits (319), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 67/127 (52%), Positives = 88/127 (69%), Gaps = 16/127 (12%)

Query: 1   MSAANGVRRVWVGQNGLLSTPAVSAVIRERVGVDGSKATGAFILTASHNPGGPHEDFGIK 60
           ++A NGV ++ VG+ G+LSTPAVSA            A G FI++ASHNPGGP  D+GIK
Sbjct: 149 IAAGNGVGKILVGKEGILSTPAVSA------------ANGGFIMSASHNPGGPEYDWGIK 196

Query: 61  YNMENGGPAPEGITDKIYENTKTIKEYLIADLPNVDISAIGVSNFSGPEGPFDVEVFDSA 120
           +N  +G PAPE ITDKIY NT +I E  IAD+P+VD+S +GV+ F    G F+VEV D  
Sbjct: 197 FNYSSGQPAPESITDKIYGNTLSISEIKIADIPDVDLSNVGVTKF----GSFNVEVIDPV 252

Query: 121 SDYVKLM 127
           SDY++L+
Sbjct: 253 SDYLELL 259