Jatropha Genome Database

JcCB0432281.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0432281.10 - phase: 0 /pseudo
         (149 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g080010.1 Peptidylprolyl isomerase, FKBP-type chr03_p...   162   4e-41
IMGA|Medtr3g080010.2 Peptidylprolyl isomerase, FKBP-type chr03_p...   155   9e-39
IMGA|Medtr3g080020.1 immunophilin, putative chr03_pseudomolecule...    83   5e-17
IMGA|Medtr3g080060.1 hypothetical protein chr03_pseudomolecule_I...    77   5e-15

>IMGA|Medtr3g080010.1 Peptidylprolyl isomerase, FKBP-type
           chr03_pseudomolecule_IMGAG_V3 18713623-18716056 E
           EGN_Mt090430 20090702
          Length = 214

 Score =  162 bits (411), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 80/126 (63%), Positives = 99/126 (78%), Gaps = 1/126 (0%)

Query: 6   KFVSLSVKRF-PRRVLLKSIGFNSILLRVSPVFAAPVPDMKEPQVVRTLKLDSGVRIQEI 64
           K  +L  K++  RR++L+ IG N IL   SP  AAP+ DM EP+V+RTLKL SGVRIQ +
Sbjct: 32  KISTLITKKYCSRRLILRFIGINHILCYGSPALAAPIMDMNEPEVIRTLKLASGVRIQVV 91

Query: 65  IEGEGSEAHEGDVVEINYVCRRSNGYFVHSTVDQFSGESSPVILPLDENRIIKGLKDVLI 124
            EGEG EAH GD+VE N VCRR+NGYFV STVDQF+GES+PVILPLDE+++I GLK VL 
Sbjct: 92  TEGEGPEAHGGDLVEFNCVCRRANGYFVFSTVDQFNGESNPVILPLDEDQMILGLKQVLT 151

Query: 125 GMKIGG 130
           GM++GG
Sbjct: 152 GMRVGG 157


>IMGA|Medtr3g080010.2 Peptidylprolyl isomerase, FKBP-type
           chr03_pseudomolecule_IMGAG_V3 18713623-18716056 E
           EGN_Mt090430 20090702
          Length = 210

 Score =  155 bits (391), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 79/126 (62%), Positives = 97/126 (76%), Gaps = 5/126 (3%)

Query: 6   KFVSLSVKRF-PRRVLLKSIGFNSILLRVSPVFAAPVPDMKEPQVVRTLKLDSGVRIQEI 64
           K  +L  K++  RR++L+ IG N IL   SP  AAP+ DM EP+V+RTLKL SGVRIQ  
Sbjct: 32  KISTLITKKYCSRRLILRFIGINHILCYGSPALAAPIMDMNEPEVIRTLKLASGVRIQ-- 89

Query: 65  IEGEGSEAHEGDVVEINYVCRRSNGYFVHSTVDQFSGESSPVILPLDENRIIKGLKDVLI 124
             GEG EAH GD+VE N VCRR+NGYFV STVDQF+GES+PVILPLDE+++I GLK VL 
Sbjct: 90  --GEGPEAHGGDLVEFNCVCRRANGYFVFSTVDQFNGESNPVILPLDEDQMILGLKQVLT 147

Query: 125 GMKIGG 130
           GM++GG
Sbjct: 148 GMRVGG 153


>IMGA|Medtr3g080020.1 immunophilin, putative
           chr03_pseudomolecule_IMGAG_V3 18718283-18720008 E
           EGN_Mt090430 20090702
          Length = 72

 Score = 83.2 bits (204), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 39/69 (56%), Positives = 53/69 (76%), Gaps = 6/69 (8%)

Query: 48  QVVRTLKLDSGVRIQEIIEGEGSEAHEGDVVEINYVCRRSNGYFVHSTVDQFSGESSPVI 107
           +  RTLKL + VRIQ++ +GEG E+ +GD+VE NYVCR ++GYFV      FSGE++P I
Sbjct: 8   EASRTLKLPNRVRIQDVTKGEGPESRDGDLVEFNYVCRHADGYFV------FSGETNPDI 61

Query: 108 LPLDENRII 116
           LPLDEN++I
Sbjct: 62  LPLDENQVI 70


>IMGA|Medtr3g080060.1 hypothetical protein
           chr03_pseudomolecule_IMGAG_V3 18726203-18727039 E
           EGN_Mt090430 20090702
          Length = 74

 Score = 76.6 bits (187), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 32/49 (65%), Positives = 42/49 (85%)

Query: 68  EGSEAHEGDVVEINYVCRRSNGYFVHSTVDQFSGESSPVILPLDENRII 116
           EG E+ +GD+VE NYVCR ++GYFV STVDQF+GE++P ILPLDEN+ +
Sbjct: 24  EGPESRDGDLVEFNYVCRHADGYFVFSTVDQFNGETNPDILPLDENQAV 72