Jatropha Genome Database

JcCB0432121.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0432121.10 - phase: 2 /partial
         (185 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g012940.1 Phosphatidylserine decarboxylase chr05_pseu...   294   2e-80
IMGA|Medtr2g008340.1 C2; Calcium-binding EF-hand; Phosphatidylse...    56   9e-09

>IMGA|Medtr5g012940.1 Phosphatidylserine decarboxylase
           chr05_pseudomolecule_IMGAG_V3 3833516-3825966 H
           EGN_Mt090430 20090702
          Length = 494

 Score =  294 bits (753), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 139/180 (77%), Positives = 161/180 (89%), Gaps = 3/180 (1%)

Query: 5   PKKGLYYCVIYLRPGDYHRIHSPVEWNVLVRRHFTGWVGNLFPMNERATRTIRNLYVENE 64
           PKKGL+YCVIYL+PGDY+RIHSP +WN+LVRRHF+G   +L+P+NERATRTIRNLY+ENE
Sbjct: 317 PKKGLFYCVIYLKPGDYNRIHSPADWNILVRRHFSG---HLYPVNERATRTIRNLYIENE 373

Query: 65  RVVLEGLWQEGFMAIAAIGATNIGSIELFIEPELCTNLPRKKLLNSQPPEERVYEPEGIG 124
           RVVLEG+WQEGFMA+AA+GATNIGSIELFIEPEL TN P KK LNS+PPEERVY+ EG+G
Sbjct: 374 RVVLEGVWQEGFMALAAVGATNIGSIELFIEPELQTNKPIKKSLNSEPPEERVYDCEGVG 433

Query: 125 KMLKKGEEVAAFNMGSTVVLVFQAPTLKLLKNRDSSSEFRFNIKRGDRVRVGEALGRWHD 184
           K+LKKG+E+ AFNMGSTVVLVFQAP  KLL   DSS EF FN+K GDR++VGEALGRWH 
Sbjct: 434 KVLKKGDELGAFNMGSTVVLVFQAPISKLLHEGDSSQEFNFNVKCGDRIKVGEALGRWHS 493


>IMGA|Medtr2g008340.1 C2; Calcium-binding EF-hand;
           Phosphatidylserine decarboxylase
           chr02_pseudomolecule_IMGAG_V3 1522472-1514108 E
           EGN_Mt090430 20090702
          Length = 631

 Score = 56.2 bits (134), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 69/152 (45%), Gaps = 33/152 (21%)

Query: 13  VIYLRPGDYHRIHSPVEWNVLVRRHFTGWVGNLFPMNERATRT-IRNLYVENERVV-LEG 70
           +  L P DYHR H PV   +     F    G+LF +N  A  +   N++ EN RVV +  
Sbjct: 488 IFRLAPQDYHRFHLPVSGTI---EQFVNIPGSLFTVNPIAVNSKYCNVFTENTRVVSIIS 544

Query: 71  LWQEGFMAIAAIGATNIGSIELFIEPELCTNLPRKKLLNSQPPEERVYEPEGIGKMLKKG 130
               G +A  AIGAT +GSI          N  +KK                 G  +KKG
Sbjct: 545 TVDFGKVAFVAIGATMVGSI----------NFTKKK-----------------GDYVKKG 577

Query: 131 EEVAAFNM-GSTVVLVFQAPTLKLLKNRDSSS 161
           +E   F   GSTV+ VF+  ++ + ++  S+S
Sbjct: 578 DEFGYFAFGGSTVICVFEKGSIAIDEDLLSNS 609