Jatropha Genome Database

JcCB0431651.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0431651.10 - phase: 0 /partial
         (341 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g006030.1 lipase-related, putative chr08_pseudomolecu...   473   e-134
IMGA|Medtr4g159550.1 lipase-related, putative chr04_pseudomolecu...   301   2e-82
IMGA|Medtr4g159560.1 lipase-related, putative chr04_pseudomolecu...   234   4e-62

>IMGA|Medtr8g006030.1 lipase-related, putative
           chr08_pseudomolecule_IMGAG_V3 548750-541816 H
           EGN_Mt090430 20090702
          Length = 511

 Score =  473 bits (1218), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 231/339 (68%), Positives = 270/339 (79%), Gaps = 16/339 (4%)

Query: 1   DDIGWVQRTPRMAPVEDGTARFLDLLNKIRNGEHKLQDSFVYLLIPGLFSNHGPLYFVGT 60
           DDIGW+Q    M PVEDGT RF ++L+ I++G HKL +S VYLLIPGLFSNHGPLYFV T
Sbjct: 177 DDIGWLQHAQGMPPVEDGTERFQEILDNIKHGVHKLPNSVVYLLIPGLFSNHGPLYFVST 236

Query: 61  KRCFSKMGLACHIAKIHSEASVEHNACELKHYIEELYWGSGKRVMLLGHSKGGVDAAAAL 120
           K CFSK+GLACHIAKIHSEASVE NA E+K YIEE+YWGS KRV+LLGHSKGGVDAAAAL
Sbjct: 237 KVCFSKLGLACHIAKIHSEASVEKNAREIKEYIEEIYWGSKKRVLLLGHSKGGVDAAAAL 296

Query: 121 SLYWSDLKDKVAGLALVQSPYGGSPVASDILREGQIADK-ETRKIMELLICKFIKGDIRA 179
           SLYW DLKDKVAGL L QSPYGG+P+ASD+LREGQ+ D    RK+ E+LICK IKGD+RA
Sbjct: 297 SLYWPDLKDKVAGLVLAQSPYGGTPIASDLLREGQLGDYVNIRKLTEILICKIIKGDMRA 356

Query: 180 LEDLTYDKRREFIMNHKLPEQIPLISFHSEASIAPGVIATMTQIAHAELPWLPLPKLGFE 239
           LEDLTY++RREF+  H LP+++P++SF +EA I+P V+AT++ +AHAELP          
Sbjct: 357 LEDLTYERRREFLQKHHLPDEVPIVSFRTEAGISPAVLATLSHVAHAELPM--------- 407

Query: 240 EPDSVVQAGR--KVPVVIPLSAAMAVSALHLQLRYGEKSDGLVTCRDAEVPGSVVVRPDR 297
               V  AG   K+PVV+PL AAMA  A  LQ+RYGEKSDGLV CRDAEVPGSVVVRP R
Sbjct: 408 ----VASAGESTKLPVVMPLGAAMAACAQLLQVRYGEKSDGLVACRDAEVPGSVVVRPKR 463

Query: 298 KLDHAWMVYSSGKKDPNEPDCSEMCEALLTMLVELGMIK 336
           KLDHAWMVYSS   D  E D S++CEALLT+LVE+G  K
Sbjct: 464 KLDHAWMVYSSLNDDLTEGDASQVCEALLTLLVEIGQKK 502


>IMGA|Medtr4g159550.1 lipase-related, putative
           chr04_pseudomolecule_IMGAG_V3 40266689-40269172 E
           EGN_Mt090430 20090702
          Length = 371

 Score =  301 bits (772), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 143/182 (78%), Positives = 159/182 (87%), Gaps = 3/182 (1%)

Query: 1   DDIGWVQRTPRMAPVEDGTARFLDLLNKIRNGEHKLQDSFVYLLIPGLFSNHGPLYFVGT 60
           DDIGW+Q  P M PV DG++RFL+LL+ IRNG+  +  SFVYLLIPGLFSNHGPLYFV T
Sbjct: 159 DDIGWLQHAPGMPPVHDGSSRFLELLSDIRNGKDSIPSSFVYLLIPGLFSNHGPLYFVAT 218

Query: 61  KRCFSKMGLACHIAKIHSEASVEHNACELKHYIEELYWGSGKRVMLLGHSKGGVDAAAAL 120
           KR FSKMGLACHIAK+HSEASVEHNA E+K YIEE+YWGSGK VMLLGHSKGG+DAAAAL
Sbjct: 219 KRFFSKMGLACHIAKVHSEASVEHNAMEIKQYIEEIYWGSGKPVMLLGHSKGGIDAAAAL 278

Query: 121 SLYWSDLKDKVAGLALVQSPYGGSPVASDILREGQIADKETRKIMELLICKFIKGDIRAL 180
           SLYWSDLK KVAGLALVQSPYGG+P+ASDILREGQI DKETR+I+EL+ICK IK   R  
Sbjct: 279 SLYWSDLKGKVAGLALVQSPYGGTPIASDILREGQIGDKETRRILELIICKIIK---RRT 335

Query: 181 ED 182
           ED
Sbjct: 336 ED 337


>IMGA|Medtr4g159560.1 lipase-related, putative
           chr04_pseudomolecule_IMGAG_V3 40269330-40270190 E
           EGN_Mt090430 20090702
          Length = 193

 Score =  234 bits (598), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 119/166 (71%), Positives = 138/166 (83%), Gaps = 2/166 (1%)

Query: 175 GDIRALEDLTYDKRREFIMNHKLPEQIPLISFHSEASIAPGVIATMTQIAHAELPWLPLP 234
           GDIRALEDLTY+KR++FIM HKLP  IPLISF SEASI P V+ATMTQIAHAELP L LP
Sbjct: 23  GDIRALEDLTYEKRKDFIMKHKLPLDIPLISFRSEASITPSVLATMTQIAHAELPRLILP 82

Query: 235 KLGFEEPDSVVQAGRKVPVVIPLSAAMAVSALHLQLRYGEKSDGLVTCRDAEVPGSVVVR 294
           K G +  D  V++GR+VPV++P+SAAMA  ALHLQLRYGEKSDG+VTCRDAEVPGSVVVR
Sbjct: 83  KFGSKVSDQFVESGRQVPVMVPVSAAMAAFALHLQLRYGEKSDGVVTCRDAEVPGSVVVR 142

Query: 295 PDRKLDHAWMVY--SSGKKDPNEPDCSEMCEALLTMLVELGMIKEE 338
           P+ KLDHAWMVY  +S KK  +EPD  EMC+A+ T+LVELG  + E
Sbjct: 143 PNMKLDHAWMVYSSNSKKKKSSEPDAREMCQAIFTLLVELGKTERE 188