Jatropha Genome Database

JcCB0431061.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0431061.10 + phase: 0 
         (296 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g047600.1 Dihydropteroate synthase, DHPS; 7,8-Dihydro...   435   e-122

>IMGA|Medtr5g047600.1 Dihydropteroate synthase, DHPS;
           7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase,
           HPPK chr05_pseudomolecule_IMGAG_V3 20101328-20097779 E
           EGN_Mt090430 20090702
          Length = 546

 Score =  435 bits (1119), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 206/296 (69%), Positives = 243/296 (82%)

Query: 1   MSLFKRLIPTKQGLGDAINHLRGPSFCLFHSASDSNMELHSQDQEVVIALGSNVGQRLHN 60
           MS+ K L   +  L  A N+L+       H+A +S++ELH+QD+EVVIALGSNVG RL N
Sbjct: 32  MSILKYLSARRSQLCAARNYLKVLGLSSLHTAPNSSVELHTQDEEVVIALGSNVGDRLQN 91

Query: 61  FNKALQMMKQSGINITRHGCLYETAPAYVTDQPHFLNSAVRAVTKHGPHELLEVLKKIEK 120
           F +AL++M++SGINITRH  LYETAPAYVTDQP FLNSAVRAVTK GPHELL  LK+IEK
Sbjct: 92  FKEALKLMRKSGINITRHASLYETAPAYVTDQPRFLNSAVRAVTKLGPHELLSALKRIEK 151

Query: 121 DIGRTAGIRYGPRPIDLDILFYGKFRIDSATLTVPHERIWERPFVMAPLVDLLGSDIEND 180
           D+GRT GIRYGPRP+DLDILFYGKF++ S  LTVPHERIWERPFVMAPL+DLLG+ ++ND
Sbjct: 152 DMGRTDGIRYGPRPMDLDILFYGKFKVRSDILTVPHERIWERPFVMAPLMDLLGTAVDND 211

Query: 181 TVACWHSLSRHSGGLFESWEKLGGEHLIGKEGLKRVIPIGNHLWDWSQKTSVMGIINLTP 240
           TVA WHS S HSGGL   WEKLGGE LIG+EG+ RV+P+ N L DWSQ+T VMG++NLTP
Sbjct: 212 TVASWHSFSGHSGGLNALWEKLGGESLIGEEGMTRVMPVANGLLDWSQRTLVMGVLNLTP 271

Query: 241 DSFSDGGKFQCVDSVVSQVHLMLSEGVDIIDFGAQSTRPMASRLSPQEELDRLMPV 296
           DSFSDGG F+ V+S VSQ  LM+SEG DIID GAQSTRPMASR+S +EEL RL+PV
Sbjct: 272 DSFSDGGNFRSVESAVSQARLMISEGADIIDIGAQSTRPMASRISVEEELGRLIPV 327