Jatropha Genome Database
- JcCB0430801.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0430801.10 + phase: 2 /pseudo/partial
(195 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|AC233662_51.1 Zinc finger, FYVE/PHD-type AC233662.1 243724-... 220 4e-58
IMGA|Medtr7g124380.1 Zinc finger, FYVE/PHD-type chr07_pseudomole... 142 1e-34
IMGA|Medtr4g076220.1 GCN5-related N-acetyltransferase; Zinc fing... 103 5e-23
IMGA|Medtr4g075930.1 Zinc finger, FYVE/PHD-type chr04_pseudomole... 103 6e-23
IMGA|Medtr1g086280.1 HMG-I and HMG-Y, DNA-binding; Zinc finger, ... 84 3e-17
IMGA|Medtr5g079630.1 Zinc finger, RING-type; Agenet; Zinc finger... 80 5e-16
IMGA|Medtr7g133080.1 GCN5-related N-acetyltransferase; Zinc fing... 79 1e-15
IMGA|Medtr5g024460.1 GCN5-related N-acetyltransferase; Zinc fing... 65 2e-11
IMGA|Medtr5g024380.1 GCN5-related N-acetyltransferase; Zinc fing... 65 2e-11
IMGA|Medtr4g165650.1 SNF2-related; Chromo; Helicase, C-terminal;... 63 8e-11
>IMGA|AC233662_51.1 Zinc finger, FYVE/PHD-type AC233662.1
243724-237189 E EGN_Mt090430 20090702
Length = 752
Score = 220 bits (560), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 104/141 (73%), Positives = 111/141 (78%)
Query: 55 GYKQGNGIVCSCCDREISPSQFEAHAGMAARRQPYRHIYTSNGLTLHDIAISLANGQNVT 114
GYKQGNGIVC CCD EISPSQFEAHAGMAARRQPYRHIY SNGLTLHDIA+SLANGQN+T
Sbjct: 490 GYKQGNGIVCGCCDIEISPSQFEAHAGMAARRQPYRHIYASNGLTLHDIALSLANGQNLT 549
Query: 115 SGVSDDMCAKCGDGGGLIFCESCPRAFHLECLDLQCVPKGVWQCPSCIKSGHGGNFTRPI 174
+G SDDMCA CGDGG LI C CPRAFH CL L VP+ W C +C + RPI
Sbjct: 550 TGDSDDMCAVCGDGGDLILCNGCPRAFHAACLGLHSVPESGWHCLNCEDNTGDERGARPI 609
Query: 175 IIRLTRVVKMPEYEVGGCAVC 195
+IRLTRV K PEYEVGGC VC
Sbjct: 610 MIRLTRVDKEPEYEVGGCVVC 630
>IMGA|Medtr7g124380.1 Zinc finger, FYVE/PHD-type
chr07_pseudomolecule_IMGAG_V3 29184001-29177130 E
EGN_Mt090430 20090702
Length = 555
Score = 142 bits (358), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 95/160 (59%), Gaps = 18/160 (11%)
Query: 54 SGYKQGNGIVCSCCDREISPSQFEAHAGMAARRQPYRHIYTSNGLTLHDIAISLANGQNV 113
G+K+G+GIVC CC+ EISPSQFE HAG A+R++PY +IYTSNG++LH+++ISL+ +
Sbjct: 122 EGFKKGSGIVCRCCNTEISPSQFEVHAGWASRKKPYAYIYTSNGVSLHELSISLSKDRKY 181
Query: 114 TSGVSDDMCAKCGDGGGLIFCESCPRAFHLECLDLQCVPKGVWQCPSCIKSGHGGNFT-- 171
++ +DD+C C DGG L+ C+ CPRAFH EC L +P+G W C C F
Sbjct: 182 SANDNDDLCVVCWDGGNLLLCDGCPRAFHKECASLSSIPRGDWYCQFCQNMFQREKFVAY 241
Query: 172 ----------------RPIIIRLTRVVKMPEYEVGGCAVC 195
I R R+VK + E+ CA+C
Sbjct: 242 NVNAFAAGRVEGVDPIEQITKRCIRIVKDIDAELSACALC 281
>IMGA|Medtr4g076220.1 GCN5-related N-acetyltransferase; Zinc finger,
FYVE/PHD-type chr04_pseudomolecule_IMGAG_V3
15089438-15093354 H EGN_Mt090430 20090702
Length = 572
Score = 103 bits (257), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 69/104 (66%), Gaps = 4/104 (3%)
Query: 58 QGNGIVCSCCDREISPSQFEAHAGMAARRQPYRHIYTSNGLTLHDIAISLANGQNVTSGV 117
+ +GI+C CC +SPS+FEAHAG A+RR+PY HI T++G++LH +AI+ ++
Sbjct: 123 KQSGILCDCCKEVVSPSKFEAHAGWASRRKPYFHIRTTDGVSLHQLAIN----HRISISN 178
Query: 118 SDDMCAKCGDGGGLIFCESCPRAFHLECLDLQCVPKGVWQCPSC 161
SD+ C+KC G L+ C+ C RAFHL C+ ++ PK W C C
Sbjct: 179 SDEHCSKCKQRGNLLCCDGCQRAFHLGCIPVESPPKEKWYCEYC 222
>IMGA|Medtr4g075930.1 Zinc finger, FYVE/PHD-type
chr04_pseudomolecule_IMGAG_V3 14949169-14944954 H
EGN_Mt090430 20090702
Length = 606
Score = 103 bits (257), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 71/107 (66%), Gaps = 4/107 (3%)
Query: 60 NGIVCSCCDREISPSQFEAHAGMAARRQPYRHIYTSNGLTLHDIAISLANGQNVTSGVSD 119
+GI+C CC+ +SPS+FEAHAG A+RR+PY +I T++G++LH+ LAN + ++ SD
Sbjct: 225 SGILCGCCNEVVSPSKFEAHAGRASRRKPYSYIRTADGVSLHE----LANNRRISMSDSD 280
Query: 120 DMCAKCGDGGGLIFCESCPRAFHLECLDLQCVPKGVWQCPSCIKSGH 166
+ C+ C G L++C+ C R+FHLEC+ L+ PK C C H
Sbjct: 281 ERCSHCEQVGNLLWCDRCQRSFHLECIPLESPPKRKRYCEYCRNKFH 327
>IMGA|Medtr1g086280.1 HMG-I and HMG-Y, DNA-binding; Zinc finger,
FYVE/PHD-type chr01_pseudomolecule_IMGAG_V3
17022849-17018628 E EGN_Mt090430 20090702
Length = 1106
Score = 84.3 bits (207), Expect = 3e-17, Method: Composition-based stats.
Identities = 44/119 (36%), Positives = 59/119 (49%), Gaps = 13/119 (10%)
Query: 55 GYKQGNGIVCSCCDREISPSQFEAHAGMAARRQPYRHIYTSNGLTLHDIAISLANGQNVT 114
G G+GI C CC+ ++ S F AHAG + + P ++IYT +L + N Q+ +
Sbjct: 842 GKITGDGIHCGCCNEIVTISDFGAHAG-SKQSDPLKNIYTEEETSLLQCLLDSWNKQDES 900
Query: 115 SGVS------------DDMCAKCGDGGGLIFCESCPRAFHLECLDLQCVPKGVWQCPSC 161
S DD C CGDGG LI C+ CP FH CLD++ P G W C C
Sbjct: 901 ELKSFHFFDVAGEDPNDDTCGVCGDGGDLICCDGCPSTFHKSCLDIKKFPSGDWHCAYC 959
>IMGA|Medtr5g079630.1 Zinc finger, RING-type; Agenet; Zinc finger,
FYVE/PHD-type; chr05_pseudomolecule_IMGAG_V3
29696677-29701197 H EGN_Mt090430 20090702
Length = 982
Score = 80.5 bits (197), Expect = 5e-16, Method: Composition-based stats.
Identities = 38/112 (33%), Positives = 58/112 (51%), Gaps = 11/112 (9%)
Query: 61 GIVCSCCDREISPSQFEAHAGMAARRQPYRHIYTSNGLTLHDIAISLANGQ--------- 111
GI C+CC S F HAG ++ +P I+ +G +L D + +
Sbjct: 716 GIRCTCCQNLYGLSGFANHAGGSSNCRPSACIFLKDGRSLLDCMMEVMQDHRTREITEKP 775
Query: 112 --NVTSGVSDDMCAKCGDGGGLIFCESCPRAFHLECLDLQCVPKGVWQCPSC 161
++ G +D++C+ C GG LI C+ CP A+H CL+L+ +P G W CPSC
Sbjct: 776 HNDLFEGENDNICSVCNYGGELILCDQCPSAYHKNCLNLEGIPDGDWFCPSC 827
>IMGA|Medtr7g133080.1 GCN5-related N-acetyltransferase; Zinc finger,
FYVE/PHD-type chr07_pseudomolecule_IMGAG_V3
31022663-31020273 H EGN_Mt090430 20090702
Length = 796
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 60/110 (54%), Gaps = 8/110 (7%)
Query: 59 GNGIVCSCCDREISPSQFEAHAGMAARRQPYRHIYTSNGLTL-------HDIAISLANGQ 111
+GIVC+CC + S FEAHAG R +P I +G +L D S G+
Sbjct: 416 SDGIVCNCCRVNFTVSGFEAHAG-CTRHRPSISILLEDGRSLFKCQREARDQKGSHCIGE 474
Query: 112 NVTSGVSDDMCAKCGDGGGLIFCESCPRAFHLECLDLQCVPKGVWQCPSC 161
+ +D++C+ CG GG L+ C+ CP AFHL CL L VP G W CP+C
Sbjct: 475 ANSEANNDNVCSICGFGGDLVLCDRCPSAFHLGCLGLDRVPDGDWFCPTC 524
>IMGA|Medtr5g024460.1 GCN5-related N-acetyltransferase; Zinc finger,
FYVE/PHD-type chr05_pseudomolecule_IMGAG_V3
9715271-9716557 H EGN_Mt090430 20090702
Length = 428
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 61/135 (45%), Gaps = 33/135 (24%)
Query: 59 GNGIVCSCCDREISPSQFEAHAGMAARRQPYRHIYTSNGLTLHDI---AISLANGQNVTS 115
+ IVC CC + + FE+HAG R +P I +G +L D A+S ++ + S
Sbjct: 35 SDAIVCDCCHVTFTITGFESHAG-CTRHRPSTSILLEDGRSLLDCQREALSSSDHKGNHS 93
Query: 116 GVS-----------------------------DDMCAKCGDGGGLIFCESCPRAFHLECL 146
V+ D++C+ CG GG L C+ CP AFHL CL
Sbjct: 94 VVNENQKKNHSIVKENRKKNHCVVKENSEAKNDNVCSICGFGGDLALCDRCPSAFHLGCL 153
Query: 147 DLQCVPKGVWQCPSC 161
L VP G W CP+C
Sbjct: 154 GLNRVPIGEWFCPTC 168
>IMGA|Medtr5g024380.1 GCN5-related N-acetyltransferase; Zinc finger,
FYVE/PHD-type chr05_pseudomolecule_IMGAG_V3
9682601-9681315 H EGN_Mt090430 20090702
Length = 428
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 61/135 (45%), Gaps = 33/135 (24%)
Query: 59 GNGIVCSCCDREISPSQFEAHAGMAARRQPYRHIYTSNGLTLHDI---AISLANGQNVTS 115
+ IVC CC + + FE+HAG R +P I +G +L D A+S ++ + S
Sbjct: 35 SDAIVCDCCHVTFTITGFESHAG-CTRHRPSTSILLEDGRSLLDCQREALSSSDHKGNHS 93
Query: 116 GVS-----------------------------DDMCAKCGDGGGLIFCESCPRAFHLECL 146
V+ D++C+ CG GG L C+ CP AFHL CL
Sbjct: 94 VVNENQKKNHSIVKENRKKNHCVVKEKSEANNDNVCSICGFGGDLALCDRCPSAFHLGCL 153
Query: 147 DLQCVPKGVWQCPSC 161
L VP G W CP+C
Sbjct: 154 GLNRVPIGEWFCPTC 168
>IMGA|Medtr4g165650.1 SNF2-related; Chromo; Helicase, C-terminal;
Zinc finger, FYVE/PHD-type; ; ;
chr04_pseudomolecule_IMGAG_V3 41778652-41770478 E
EGN_Mt090430 20090702
Length = 1372
Score = 63.2 bits (152), Expect = 8e-11, Method: Composition-based stats.
Identities = 24/44 (54%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 122 CAKCGDGGGLIFCESCPRAFHLECLD--LQCVPKGVWQCPSCIK 163
C C GG L+ C+SCPR +HL+CLD L+ +P G WQCPSC +
Sbjct: 38 CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPMGKWQCPSCFE 81