Jatropha Genome Database
- JcCB0430311.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0430311.10 - phase: 2 /partial
(356 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr5g104300.1 Phosphoribulokinase/uridine kinase chr05_ps... 522 e-149
IMGA|Medtr3g080300.1 Phosphoribosyltransferase; Phosphoribulokin... 521 e-148
IMGA|Medtr3g080300.2 Phosphoribosyltransferase; Phosphoribulokin... 520 e-148
IMGA|Medtr8g109340.1 Phosphoribosyltransferase; Excinuclease ABC... 477 e-135
IMGA|Medtr6g022880.1 Phosphoribosyltransferase; Phosphoribulokin... 387 e-108
IMGA|Medtr3g080300.3 Phosphoribosyltransferase; Phosphoribulokin... 191 4e-49
IMGA|Medtr8g109340.2 Phosphoribulokinase/uridine kinase chr08_ps... 164 5e-41
IMGA|Medtr6g022860.1 Uridine kinase chr06_pseudomolecule_IMGAG_V... 117 7e-27
IMGA|Medtr5g027690.1 Phosphoribulokinase/uridine kinase chr05_ps... 76 2e-14
IMGA|Medtr8g115410.1 Phosphoribulokinase/uridine kinase; Adenyla... 74 9e-14
>IMGA|Medtr5g104300.1 Phosphoribulokinase/uridine kinase
chr05_pseudomolecule_IMGAG_V3 41812941-41819472 E
EGN_Mt090430 20090702
Length = 479
Score = 522 bits (1345), Expect = e-149, Method: Compositional matrix adjust.
Identities = 249/348 (71%), Positives = 290/348 (83%), Gaps = 1/348 (0%)
Query: 10 SSPLHPPKQPFVIGVAGGTASGKTTVCNMIISQLRDQGVLLINQDSFYHSLSDEQLEKVQ 69
+S +QPFVIGVAGG+ASGKT VC+MII QL DQ V+L+NQDSFYH+L+ EQL +VQ
Sbjct: 39 TSAFDEYRQPFVIGVAGGSASGKTAVCDMIIQQLHDQRVVLVNQDSFYHNLTKEQLTRVQ 98
Query: 70 EYNFDHPGAFNTELLLSCMERLKNGHEVTIPNYDFKTHKSTLV-GQKVNPSDVIILEGIL 128
+YNFDHP AF++E LLS M++LK+ V IP YDFK +K+ + ++VNP+DVIILEGIL
Sbjct: 99 DYNFDHPEAFDSERLLSVMDKLKHSQAVDIPKYDFKCYKNDVFPARRVNPADVIILEGIL 158
Query: 129 ILHDPRVRELMNMKIFVETDSDLRLARRIKRDTVERGRNIQNVLDQYARFVKPSFEEFIL 188
+ HDPRVR LMNMKIFV+TD+D+RLARRIKRDT + RNI+ VLDQY++FVKP+F++FIL
Sbjct: 159 VFHDPRVRALMNMKIFVDTDADVRLARRIKRDTADNARNIEAVLDQYSKFVKPAFDDFIL 218
Query: 189 PSKKYADIIIPRGGDNAVAIDLIVQHIHTKLGQHDLCKIYPNVFVISSTFQIRGMHTLIR 248
P+KKYADIIIPRGGDN VAIDLIVQHI TKLGQHDLCKIYPN++VI STFQIRGMHTLIR
Sbjct: 219 PTKKYADIIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNLYVIHSTFQIRGMHTLIR 278
Query: 249 DVKTTKHDFVFYADRLIRMVVEHGLGHLPFTERQITTPTGSIYPGVVFYKRLCGVSVIRS 308
D +T KHDFVFYADRLIR+VVE GLGHLPFTE+Q+ PTGS+Y GV F KRLCGVSVIRS
Sbjct: 279 DSQTKKHDFVFYADRLIRLVVEQGLGHLPFTEKQVIAPTGSVYSGVDFCKRLCGVSVIRS 338
Query: 309 GESMENALRACCXXXXXXXXXXXXXXSNGRQLIYEKLPADISSRHVLL 356
GESMENALRACC NG+QLIYEKLP DIS RHVLL
Sbjct: 339 GESMENALRACCKGIKIGKILIHREGDNGQQLIYEKLPNDISDRHVLL 386
>IMGA|Medtr3g080300.1 Phosphoribosyltransferase;
Phosphoribulokinase/uridine kinase
chr03_pseudomolecule_IMGAG_V3 18843227-18850010 E
EGN_Mt090430 20090702
Length = 476
Score = 521 bits (1341), Expect = e-148, Method: Compositional matrix adjust.
Identities = 246/339 (72%), Positives = 290/339 (85%), Gaps = 1/339 (0%)
Query: 18 QPFVIGVAGGTASGKTTVCNMIISQLRDQGVLLINQDSFYHSLSDEQLEKVQEYNFDHPG 77
QPFVIGVAGG ASGK TVC+MI+ QL DQ V+L+NQDSFY++L++E+ +VQ+YNFDHP
Sbjct: 47 QPFVIGVAGGAASGKKTVCDMIVQQLHDQRVVLVNQDSFYNNLTEEERARVQDYNFDHPD 106
Query: 78 AFNTELLLSCMERLKNGHEVTIPNYDFKTHKSTLVGQKVNPSDVIILEGILILHDPRVRE 137
AF+TE LL M++LK+G V IP YDFK++KS + ++VNPSDVIILEGIL+ HDPRVRE
Sbjct: 107 AFDTEELLRVMDKLKHGEAVDIPKYDFKSYKSDAL-RRVNPSDVIILEGILVFHDPRVRE 165
Query: 138 LMNMKIFVETDSDLRLARRIKRDTVERGRNIQNVLDQYARFVKPSFEEFILPSKKYADII 197
LMNMKIFV+TD+D+RLARRI+RDT E+ R+I +LDQY++FVKP+F++FILP+KKYADII
Sbjct: 166 LMNMKIFVDTDADVRLARRIRRDTSEKDRDIGAILDQYSKFVKPAFDDFILPTKKYADII 225
Query: 198 IPRGGDNAVAIDLIVQHIHTKLGQHDLCKIYPNVFVISSTFQIRGMHTLIRDVKTTKHDF 257
IPRGGDN VA+DLIVQHI TKLGQHDLCKIYPN++VI STFQIRGMHTLIRD + TKHDF
Sbjct: 226 IPRGGDNHVAVDLIVQHIRTKLGQHDLCKIYPNLYVIHSTFQIRGMHTLIRDAQITKHDF 285
Query: 258 VFYADRLIRMVVEHGLGHLPFTERQITTPTGSIYPGVVFYKRLCGVSVIRSGESMENALR 317
VFY+DRLIR+VVEHGLGHLPFTE+Q+ TPTGS+Y GV F KRLCGVSVIRSGESMENALR
Sbjct: 286 VFYSDRLIRLVVEHGLGHLPFTEKQVITPTGSVYTGVDFCKRLCGVSVIRSGESMENALR 345
Query: 318 ACCXXXXXXXXXXXXXXSNGRQLIYEKLPADISSRHVLL 356
ACC NG+QLIYEKLP DIS RHVLL
Sbjct: 346 ACCKGIKIGKILIHREGDNGQQLIYEKLPNDISERHVLL 384
>IMGA|Medtr3g080300.2 Phosphoribosyltransferase;
Phosphoribulokinase/uridine kinase
chr03_pseudomolecule_IMGAG_V3 18843227-18850010 E
EGN_Mt090430 20090702
Length = 466
Score = 520 bits (1339), Expect = e-148, Method: Compositional matrix adjust.
Identities = 246/339 (72%), Positives = 290/339 (85%), Gaps = 1/339 (0%)
Query: 18 QPFVIGVAGGTASGKTTVCNMIISQLRDQGVLLINQDSFYHSLSDEQLEKVQEYNFDHPG 77
QPFVIGVAGG ASGK TVC+MI+ QL DQ V+L+NQDSFY++L++E+ +VQ+YNFDHP
Sbjct: 37 QPFVIGVAGGAASGKKTVCDMIVQQLHDQRVVLVNQDSFYNNLTEEERARVQDYNFDHPD 96
Query: 78 AFNTELLLSCMERLKNGHEVTIPNYDFKTHKSTLVGQKVNPSDVIILEGILILHDPRVRE 137
AF+TE LL M++LK+G V IP YDFK++KS + ++VNPSDVIILEGIL+ HDPRVRE
Sbjct: 97 AFDTEELLRVMDKLKHGEAVDIPKYDFKSYKSDAL-RRVNPSDVIILEGILVFHDPRVRE 155
Query: 138 LMNMKIFVETDSDLRLARRIKRDTVERGRNIQNVLDQYARFVKPSFEEFILPSKKYADII 197
LMNMKIFV+TD+D+RLARRI+RDT E+ R+I +LDQY++FVKP+F++FILP+KKYADII
Sbjct: 156 LMNMKIFVDTDADVRLARRIRRDTSEKDRDIGAILDQYSKFVKPAFDDFILPTKKYADII 215
Query: 198 IPRGGDNAVAIDLIVQHIHTKLGQHDLCKIYPNVFVISSTFQIRGMHTLIRDVKTTKHDF 257
IPRGGDN VA+DLIVQHI TKLGQHDLCKIYPN++VI STFQIRGMHTLIRD + TKHDF
Sbjct: 216 IPRGGDNHVAVDLIVQHIRTKLGQHDLCKIYPNLYVIHSTFQIRGMHTLIRDAQITKHDF 275
Query: 258 VFYADRLIRMVVEHGLGHLPFTERQITTPTGSIYPGVVFYKRLCGVSVIRSGESMENALR 317
VFY+DRLIR+VVEHGLGHLPFTE+Q+ TPTGS+Y GV F KRLCGVSVIRSGESMENALR
Sbjct: 276 VFYSDRLIRLVVEHGLGHLPFTEKQVITPTGSVYTGVDFCKRLCGVSVIRSGESMENALR 335
Query: 318 ACCXXXXXXXXXXXXXXSNGRQLIYEKLPADISSRHVLL 356
ACC NG+QLIYEKLP DIS RHVLL
Sbjct: 336 ACCKGIKIGKILIHREGDNGQQLIYEKLPNDISERHVLL 374
>IMGA|Medtr8g109340.1 Phosphoribosyltransferase; Excinuclease ABC, C
subunit, C-terminal; Phosphoribulokinase/uridine kinase
chr08_pseudomolecule_IMGAG_V3 24500586-24495254 E
EGN_Mt090430 20090702
Length = 458
Score = 477 bits (1227), Expect = e-135, Method: Compositional matrix adjust.
Identities = 239/368 (64%), Positives = 290/368 (78%), Gaps = 14/368 (3%)
Query: 2 SLQSNVSISSPLHPP--------KQPFVIGVAGGTASGKTTVCNMIISQLRDQGVLLINQ 53
SL S+ + S HP F+IGV+GGTASGKTTVC+MII QL+D V+L+NQ
Sbjct: 8 SLSSSAAHFSGCHPSSSTSSSSHNNVFLIGVSGGTASGKTTVCDMIIQQLQDHRVVLVNQ 67
Query: 54 DSFYHSLSDEQLEKVQEYNFDHPGAFNTELLLSCMERLKNGHEVTIPNYDFKTH-KSTLV 112
DSFY L++++ ++V EYNFDHP AF+TE L+ + +LK+G V +P YDFK H +++
Sbjct: 68 DSFYRGLTNDESKRVHEYNFDHPDAFDTEQLVETLIKLKSGQSVQVPVYDFKLHQRASDR 127
Query: 113 GQKVNPSDVIILEGILILHDPRVRELMNMKIFVETDSDLRLARRIKRDTVERGRNIQNVL 172
++VN S+VIILEGIL+ H+PRVR++MNMKIFV+ D D+RL RRI+RDTVERGR++ +VL
Sbjct: 128 YRQVNASEVIILEGILVFHEPRVRDMMNMKIFVDADPDVRLGRRIRRDTVERGRDVHSVL 187
Query: 173 DQ----YARFVKPSFEEFILPSKKYADIIIPRGGDNAVAIDLIVQHIHTKLGQHDLCKIY 228
+Q YA+FVKP+F++FILPSKKYADIIIPRGGDN VAIDLIVQHIHTKLGQH LCKIY
Sbjct: 188 EQARFVYAKFVKPAFDDFILPSKKYADIIIPRGGDNCVAIDLIVQHIHTKLGQHCLCKIY 247
Query: 229 PNVFVISSTFQIRGMHTLIRDVKTTKHDFVFYADRLIRMVVEHGLGHLPFTERQITTPTG 288
PN+ VI STFQ RGMHTLIRD + +KHDFVFY+DRLIR+VVEHGLG+LPFTE+Q+TTPTG
Sbjct: 248 PNLNVIQSTFQTRGMHTLIRDKEISKHDFVFYSDRLIRLVVEHGLGYLPFTEKQVTTPTG 307
Query: 289 SIYPGVVFYKRLCGVSVIRSGESMENALRACCXXXXXXXXXXXXXXSNGRQLIYEKLPAD 348
SIY GV F K+LCGVSVIRSGESMENALRACC + QLIYEKLP D
Sbjct: 308 SIYIGVDFCKKLCGVSVIRSGESMENALRACC-KGIKIGKILIHREGDETQLIYEKLPKD 366
Query: 349 ISSRHVLL 356
IS RHVLL
Sbjct: 367 ISERHVLL 374
>IMGA|Medtr6g022880.1 Phosphoribosyltransferase;
Phosphoribulokinase/uridine kinase
chr06_pseudomolecule_IMGAG_V3 5229442-5233044 H
EGN_Mt090430 20090702
Length = 324
Score = 387 bits (995), Expect = e-108, Method: Compositional matrix adjust.
Identities = 182/241 (75%), Positives = 211/241 (87%), Gaps = 1/241 (0%)
Query: 116 VNPSDVIILEGILILHDPRVRELMNMKIFVETDSDLRLARRIKRDTVERGRNIQNVLDQY 175
V+P+D+I+LEGIL+LHD RVR L+NMKIFV+ DSD+RL RRI+R +ERGRNIQNVLDQY
Sbjct: 2 VHPADIIVLEGILVLHDSRVRNLLNMKIFVDEDSDVRLTRRIQRLAIERGRNIQNVLDQY 61
Query: 176 ARFVKPSFEEFILPSKKYADIIIPRGGDNAVAIDLIVQHIHTKLGQHDLCKIYPNVFVIS 235
RFVKPSFE+F+LP+KKYADIIIP GGDN VAIDLI+Q+I +KLGQHD+CKIYPN+FVI
Sbjct: 62 CRFVKPSFEDFVLPTKKYADIIIP-GGDNDVAIDLIIQNIRSKLGQHDMCKIYPNIFVIF 120
Query: 236 STFQIRGMHTLIRDVKTTKHDFVFYADRLIRMVVEHGLGHLPFTERQITTPTGSIYPGVV 295
STFQI+GMHTLIRDV T+KHDFVFY+DRLIR+VVEHGLGHLPFTE+Q+TTPTGS+Y GVV
Sbjct: 121 STFQIKGMHTLIRDVGTSKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVTTPTGSVYSGVV 180
Query: 296 FYKRLCGVSVIRSGESMENALRACCXXXXXXXXXXXXXXSNGRQLIYEKLPADISSRHVL 355
F LCGVS+IRSGESMENALRACC SNGRQLIYEKLP+DI++RHVL
Sbjct: 181 FCSSLCGVSIIRSGESMENALRACCKGIKIGKILILGDGSNGRQLIYEKLPSDIANRHVL 240
Query: 356 L 356
L
Sbjct: 241 L 241
>IMGA|Medtr3g080300.3 Phosphoribosyltransferase;
Phosphoribulokinase/uridine kinase
chr03_pseudomolecule_IMGAG_V3 18843227-18850010 E
EGN_Mt090430 20090702
Length = 198
Score = 191 bits (486), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 89/130 (68%), Positives = 111/130 (85%), Gaps = 1/130 (0%)
Query: 18 QPFVIGVAGGTASGKTTVCNMIISQLRDQGVLLINQDSFYHSLSDEQLEKVQEYNFDHPG 77
QPFVIGVAGG ASGK TVC+MI+ QL DQ V+L+NQDSFY++L++E+ +VQ+YNFDHP
Sbjct: 37 QPFVIGVAGGAASGKKTVCDMIVQQLHDQRVVLVNQDSFYNNLTEEERARVQDYNFDHPD 96
Query: 78 AFNTELLLSCMERLKNGHEVTIPNYDFKTHKSTLVGQKVNPSDVIILEGILILHDPRVRE 137
AF+TE LL M++LK+G V IP YDFK++KS + ++VNPSDVIILEGIL+ HDPRVRE
Sbjct: 97 AFDTEELLRVMDKLKHGEAVDIPKYDFKSYKSDAL-RRVNPSDVIILEGILVFHDPRVRE 155
Query: 138 LMNMKIFVET 147
LMNMKIFV+T
Sbjct: 156 LMNMKIFVDT 165
>IMGA|Medtr8g109340.2 Phosphoribulokinase/uridine kinase
chr08_pseudomolecule_IMGAG_V3 24500586-24497243 E
EGN_Mt090430 20090702
Length = 182
Score = 164 bits (416), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 82/155 (52%), Positives = 113/155 (72%), Gaps = 9/155 (5%)
Query: 2 SLQSNVSISSPLHPP--------KQPFVIGVAGGTASGKTTVCNMIISQLRDQGVLLINQ 53
SL S+ + S HP F+IGV+GGTASGKTTVC+MII QL+D V+L+NQ
Sbjct: 8 SLSSSAAHFSGCHPSSSTSSSSHNNVFLIGVSGGTASGKTTVCDMIIQQLQDHRVVLVNQ 67
Query: 54 DSFYHSLSDEQLEKVQEYNFDHPGAFNTELLLSCMERLKNGHEVTIPNYDFKTH-KSTLV 112
DSFY L++++ ++V EYNFDHP AF+TE L+ + +LK+G V +P YDFK H +++
Sbjct: 68 DSFYRGLTNDESKRVHEYNFDHPDAFDTEQLVETLIKLKSGQSVQVPVYDFKLHQRASDR 127
Query: 113 GQKVNPSDVIILEGILILHDPRVRELMNMKIFVET 147
++VN S+VIILEGIL+ H+PRVR++MNMKIFV+
Sbjct: 128 YRQVNASEVIILEGILVFHEPRVRDMMNMKIFVDA 162
>IMGA|Medtr6g022860.1 Uridine kinase chr06_pseudomolecule_IMGAG_V3
5216765-5220887 E EGN_Mt090430 20090702
Length = 108
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 58/83 (69%), Positives = 65/83 (78%), Gaps = 2/83 (2%)
Query: 2 SLQSNVSISSPLHPPKQPFVIGVAGGTASGKTTVCNMIISQLRDQGVLLINQDSFYHSLS 61
SL SN S + P PKQPF IGVAGGTASGKTTVCN+I SQ DQ V+LINQDSFYHSLS
Sbjct: 22 SLLSNASKAPP--SPKQPFFIGVAGGTASGKTTVCNLINSQFHDQRVVLINQDSFYHSLS 79
Query: 62 DEQLEKVQEYNFDHPGAFNTELL 84
DE L+KV +YNFDHPG + +L
Sbjct: 80 DETLQKVNDYNFDHPGEYIASIL 102
>IMGA|Medtr5g027690.1 Phosphoribulokinase/uridine kinase
chr05_pseudomolecule_IMGAG_V3 11341541-11338022 E
EGN_Mt090430 20090702
Length = 411
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 102/200 (51%), Gaps = 25/200 (12%)
Query: 18 QPFVIGVAGGTASGKTTVCNMIISQLR-----------DQGVLLINQDSF-----YHSLS 61
Q VIG+A + GK+T + S D L+ + + YHSL
Sbjct: 64 QTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSL- 122
Query: 62 DEQLEKVQEYNFDHPGAFNTELLLSCMERLKNGHEVTIPNYDFKTHKSTLVG--QKVNPS 119
D K + P A + +L+ ++ +K G V P Y+ H + L+ + + P
Sbjct: 123 DRTGRKEKGVTALDPRANDFDLMYEQVKAIKEGVSVQKPIYN---HVTGLLDPPELIKPP 179
Query: 120 DVIILEGILILHDPRVRELMNMKIFVETDSDLRLARRIKRDTVERGRNIQNVLDQY-ARF 178
++++EG+ ++D RVR+L++ I+++ ++++ A +I+RD ERG +++++ AR
Sbjct: 180 KILVIEGLHPMYDSRVRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEAR- 238
Query: 179 VKPSFEEFILPSKKYADIII 198
KP FE +I P K+YAD +I
Sbjct: 239 -KPDFEAYIDPQKQYADAVI 257
>IMGA|Medtr8g115410.1 Phosphoribulokinase/uridine kinase; Adenylate
cyclase chr08_pseudomolecule_IMGAG_V3 25911150-25916455
E EGN_Mt090430 20090702
Length = 576
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 96/181 (53%), Gaps = 14/181 (7%)
Query: 21 VIGVAGGTASGKTTVCNMIISQLRDQGVLLINQDSFYHSLSDEQLEKVQEYNFDHPGAFN 80
++GVAG + +GKT + + S + + +I D++ S ++ + NFD P +
Sbjct: 72 LVGVAGPSGAGKTVFTDKVFSFM--PSIAVITMDNYNDS------SRIIDGNFDDPRLTD 123
Query: 81 TELLLSCMERLKNGHEVTIPNYDFKTHKSTLVGQK---VNPSDVIILEGILILHDPRVRE 137
+ LL ++ LK+G +P YDFK+ S+ +G + V S ++I+EGI L + ++R
Sbjct: 124 YDTLLKNIQDLKSGKPAQVPIYDFKS--SSRIGYRTIEVPSSRIVIIEGIYALSE-KLRP 180
Query: 138 LMNMKIFVETDSDLRLARRIKRDTVERGRNIQNVLDQYARFVKPSFEEFILPSKKYADII 197
L+++++ V L +R+ RD G+ + ++ Q + V P ++ FI P + A I
Sbjct: 181 LLDLRVSVTGGVHFDLVKRVLRDIQRAGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIK 240
Query: 198 I 198
I
Sbjct: 241 I 241