Jatropha Genome Database

JcCB0429731.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0429731.10 - phase: 0 
         (123 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g089090.1 Streptomyces cyclase/dehydrase chr05_pseudo...   201   9e-53

>IMGA|Medtr5g089090.1 Streptomyces cyclase/dehydrase
           chr05_pseudomolecule_IMGAG_V3 34574227-34575070 E
           EGN_Mt090430 20090702
          Length = 167

 Score =  201 bits (510), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 93/122 (76%), Positives = 109/122 (89%)

Query: 1   MPMVERCTDLVGDEGVPGYVRLVSGFMFPQEDGERSWIKERLVCMDLTSYNYVYKMEASN 60
           MPMVERCT L G+E  PG VRLVSGFMFPQ+DGERSWIKERL+  D +S++YVY+MEASN
Sbjct: 39  MPMVERCTTLAGNEDEPGCVRLVSGFMFPQQDGERSWIKERLISKDFSSHSYVYRMEASN 98

Query: 61  VGLDGSVNTLKLVDYGDDSTLVNWSFQIDPLEGASEDNIMDYLGFLYKSCINRIEAAIKA 120
           VGLDGSVNTLKLVDYGDDS L++WSF+I+PLE  SE++++DYLGFLYKSCIN+IE AI A
Sbjct: 99  VGLDGSVNTLKLVDYGDDSALIHWSFEINPLEDVSENSLVDYLGFLYKSCINKIEGAIVA 158

Query: 121 AS 122
           AS
Sbjct: 159 AS 160