Jatropha Genome Database
- JcCB0428641.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0428641.10 - phase: 1 /partial
(269 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr3g122650.1 CCT chr03_pseudomolecule_IMGAG_V3 30549293-... 184 5e-47
IMGA|Medtr7g146130.1 Response regulator receiver; CCT chr07_pseu... 103 7e-23
IMGA|Medtr4g079920.1 Response regulator receiver; CCT chr04_pseu... 83 1e-16
IMGA|Medtr1g016230.1 Zinc finger, B-box; CCT chr01_pseudomolecul... 60 2e-09
IMGA|Medtr8g128200.1 Zinc finger, B-box; CCT chr08_pseudomolecul... 57 1e-08
IMGA|Medtr3g138670.1 Zinc finger, B-box; CCT chr03_pseudomolecul... 57 1e-08
IMGA|Medtr4g041790.1 Zinc finger, B-box; CCT chr04_pseudomolecul... 57 1e-08
IMGA|Medtr5g075430.1 Zinc finger, GATA-type; ZIM; CCT chr05_pseu... 56 2e-08
IMGA|Medtr7g032090.1 CCT chr07_pseudomolecule_IMGAG_V3 7866334-7... 54 8e-08
IMGA|Medtr4g121420.1 Zinc finger, GATA-type; ZIM; CCT chr04_pseu... 54 9e-08
IMGA|Medtr4g121280.1 Zinc finger, GATA-type; ZIM; CCT chr04_pseu... 54 9e-08
IMGA|Medtr3g149720.1 Zinc finger, GATA-type; ZIM; CCT chr03_pseu... 54 1e-07
IMGA|AC233660_36.1 CCT AC233660.2 135880-137006 E EGN_Mt090430 2... 53 1e-07
IMGA|Medtr4g158260.1 Zinc finger, B-box; CCT chr04_pseudomolecul... 53 1e-07
IMGA|Medtr5g080950.1 CCT chr05_pseudomolecule_IMGAG_V3 30381879-... 51 7e-07
IMGA|Medtr7g129880.1 Zinc finger, B-box; CCT chr07_pseudomolecul... 50 9e-07
IMGA|Medtr3g149710.1 Zinc finger, GATA-type; ZIM; CCT chr03_pseu... 50 9e-07
IMGA|Medtr2g114040.1 CCT chr02_pseudomolecule_IMGAG_V3 26879845-... 49 3e-06
>IMGA|Medtr3g122650.1 CCT chr03_pseudomolecule_IMGAG_V3
30549293-30547963 E EGN_Mt090430 20090702
Length = 283
Score = 184 bits (466), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 117/234 (50%), Positives = 147/234 (62%), Gaps = 11/234 (4%)
Query: 31 SNASIANIKTKEYEIVIPCSQQRVFPLHIPVNGMSFNNLCTNYGSVFPPIFCKQXXXXXX 90
S++SI +++ KE E+ SQQR L IPV G+ FN+LC YGS PP F Q
Sbjct: 44 SDSSIPSMQ-KESELATSHSQQR-HSLPIPVKGVRFNDLCMAYGSTLPPGFRTQSGPPSM 101
Query: 91 XXXXXXXXXXXXXKVNAFPQSTLR-SNSDQLYDCLGQTAKDSTSPSLQKQDHKLDSLEDR 149
+ +AF QS ++ +NS+QLY+ G + + + Q+HK + ED+
Sbjct: 102 PGSVVFLEQNF--QADAFYQSNVKQNNSEQLYEPRGPNGNSTPNQIMYTQEHKSEHPEDQ 159
Query: 150 GHISAATDHSATSSFCN-VSATHLN-MGYGSTSGSNSNVDQAAIIRT--TSERKNEGGIL 205
IS TD S +SSFCN +A++ N +GYGS GS+ NV+Q A RT SE KNE L
Sbjct: 160 RLISPTTDQSVSSSFCNNGNASNFNSIGYGSNCGSSGNVEQVATFRTAAVSEGKNEE--L 217
Query: 206 HNDANSHRAIQREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQ 259
N SHRA+ REAAL KFRLKRK+RCYEKKVRYESRKKLAEQRPRVKGQFVRQ
Sbjct: 218 TNSGYSHRAMLREAALNKFRLKRKERCYEKKVRYESRKKLAEQRPRVKGQFVRQ 271
>IMGA|Medtr7g146130.1 Response regulator receiver; CCT
chr07_pseudomolecule_IMGAG_V3 34887893-34891610 E
EGN_Mt090430 20090702
Length = 636
Score = 103 bits (258), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 49/62 (79%), Positives = 55/62 (88%), Gaps = 2/62 (3%)
Query: 208 DANSHRAIQREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQVQ--LPIS 265
D +SHR QREAALTKFRLKRKDRCY+KKVRYESRK+ AE RPRVKGQFVRQVQ +P++
Sbjct: 572 DTSSHRTSQREAALTKFRLKRKDRCYDKKVRYESRKRQAENRPRVKGQFVRQVQGEVPVA 631
Query: 266 ET 267
ET
Sbjct: 632 ET 633
>IMGA|Medtr4g079920.1 Response regulator receiver; CCT
chr04_pseudomolecule_IMGAG_V3 16245711-16238402 E
EGN_Mt090430 20090702
Length = 796
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 36/50 (72%), Positives = 44/50 (88%)
Query: 211 SHRAIQREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQV 260
+ R REAALTKFR KRK+RC++KKVRY SRKKLA+QRPRV+GQFV+Q+
Sbjct: 715 AERIALREAALTKFRQKRKERCFDKKVRYHSRKKLADQRPRVRGQFVKQI 764
>IMGA|Medtr1g016230.1 Zinc finger, B-box; CCT
chr01_pseudomolecule_IMGAG_V3 3096189-3098130 E
EGN_Mt090430 20090702
Length = 316
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 37/49 (75%)
Query: 214 AIQREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQVQL 262
A++REA + ++R KRK+R +EK +RY SRK AE RPR+KG+F ++ L
Sbjct: 252 AVEREARVMRYREKRKNRRFEKTIRYASRKAYAETRPRIKGRFAKRSDL 300
>IMGA|Medtr8g128200.1 Zinc finger, B-box; CCT
chr08_pseudomolecule_IMGAG_V3 29899260-29897234 E
EGN_Mt090430 20090702
Length = 375
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 5/72 (6%)
Query: 196 SERKNEGGILHNDANSHRAIQ-----REAALTKFRLKRKDRCYEKKVRYESRKKLAEQRP 250
SE GG+ ++ A Q REA + ++R KRK+R +EK +RY SRK AE RP
Sbjct: 272 SESMVSGGVNSSNQGVQGATQLCGMDREARVMRYREKRKNRKFEKTIRYASRKAYAETRP 331
Query: 251 RVKGQFVRQVQL 262
R+KG+F ++ ++
Sbjct: 332 RIKGRFAKRTEI 343
>IMGA|Medtr3g138670.1 Zinc finger, B-box; CCT
chr03_pseudomolecule_IMGAG_V3 35482669-35481504 F
EGN_Mt090430 20090702
Length = 290
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 35/46 (76%)
Query: 214 AIQREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQ 259
A+ REA + ++R KRK+R +EK +RY SRK AE RPR+KG+F ++
Sbjct: 229 AVDREARVMRYREKRKNRRFEKTIRYASRKAYAETRPRIKGRFAKR 274
>IMGA|Medtr4g041790.1 Zinc finger, B-box; CCT
chr04_pseudomolecule_IMGAG_V3 9967580-9968745 F
EGN_Mt090430 20090702
Length = 290
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 35/46 (76%)
Query: 214 AIQREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQ 259
A+ REA + ++R KRK+R +EK +RY SRK AE RPR+KG+F ++
Sbjct: 229 AVDREARVMRYREKRKNRRFEKTIRYASRKAYAETRPRIKGRFAKR 274
>IMGA|Medtr5g075430.1 Zinc finger, GATA-type; ZIM; CCT
chr05_pseudomolecule_IMGAG_V3 27488698-27493540 E
EGN_Mt090430 20090702
Length = 286
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 34/43 (79%)
Query: 215 IQREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFV 257
+ REA+L +FR KRK+RC++KKVRYE R+++A + R KGQF
Sbjct: 133 LHREASLLRFRQKRKERCFDKKVRYEVRQEVALRMQRKKGQFT 175
>IMGA|Medtr7g032090.1 CCT chr07_pseudomolecule_IMGAG_V3
7866334-7862116 E EGN_Mt090430 20090702
Length = 330
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 36/44 (81%)
Query: 216 QREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQ 259
QREA+L +++ KR+ R + K++RYE RK AE+RPR+KG+FV++
Sbjct: 286 QREASLLRYKEKRQSRLFAKRIRYEVRKLNAEKRPRMKGRFVKR 329
>IMGA|Medtr4g121420.1 Zinc finger, GATA-type; ZIM; CCT
chr04_pseudomolecule_IMGAG_V3 28466807-28470502 H
EGN_Mt090430 20090702
Length = 334
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 32/42 (76%)
Query: 216 QREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFV 257
+R A+L +FR KRK+RC+EKK+RY RK++AE+ R GQF
Sbjct: 107 RRSASLVRFREKRKERCFEKKIRYTCRKEVAERMQRKNGQFA 148
>IMGA|Medtr4g121280.1 Zinc finger, GATA-type; ZIM; CCT
chr04_pseudomolecule_IMGAG_V3 28392374-28396069 H
EGN_Mt090430 20090702
Length = 334
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 32/42 (76%)
Query: 216 QREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFV 257
+R A+L +FR KRK+RC+EKK+RY RK++AE+ R GQF
Sbjct: 107 RRSASLVRFREKRKERCFEKKIRYTCRKEVAERMQRKNGQFA 148
>IMGA|Medtr3g149720.1 Zinc finger, GATA-type; ZIM; CCT
chr03_pseudomolecule_IMGAG_V3 39259323-39268418 E
EGN_Mt090430 20090702
Length = 359
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 36/50 (72%)
Query: 216 QREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQVQLPIS 265
+R A+L ++R KRK+RC++KK+RY RK++AE+ R KGQF Q P S
Sbjct: 130 RRIASLVRYREKRKERCFDKKIRYTVRKEVAERMHREKGQFAPLKQSPGS 179
>IMGA|AC233660_36.1 CCT AC233660.2 135880-137006 E EGN_Mt090430
20090702
Length = 166
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 36/48 (75%)
Query: 217 REAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQVQLPI 264
REA ++++R KR+ R + KK+RYE RK AE+RPR+KG+FV++ +
Sbjct: 112 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRASFAV 159
>IMGA|Medtr4g158260.1 Zinc finger, B-box; CCT
chr04_pseudomolecule_IMGAG_V3 39652336-39650431 E
EGN_Mt090430 20090702
Length = 416
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 35/43 (81%)
Query: 217 REAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQ 259
REA ++++R KR+ R + KK+RYE RK AE+RPR+KG+FV++
Sbjct: 358 REARVSRYREKRRTRLFAKKIRYEVRKLNAEKRPRMKGRFVKR 400
>IMGA|Medtr5g080950.1 CCT chr05_pseudomolecule_IMGAG_V3
30381879-30383633 E EGN_Mt090430 20090702
Length = 217
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 37/44 (84%)
Query: 216 QREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQ 259
+REA++ +++ KR++R + KK+RY+ RK A++RPR+KG+FV++
Sbjct: 173 RREASVLRYKEKRQNRLFSKKIRYQVRKLNADKRPRIKGRFVKR 216
>IMGA|Medtr7g129880.1 Zinc finger, B-box; CCT
chr07_pseudomolecule_IMGAG_V3 30195911-30193246 E
EGN_Mt090430 20090702
Length = 372
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 33/43 (76%)
Query: 216 QREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVR 258
+R++AL +++ K+K R Y+K +RYESRK AE R RVKG+F +
Sbjct: 327 ERDSALLRYKQKKKTRRYDKHIRYESRKVRAESRTRVKGRFAK 369
>IMGA|Medtr3g149710.1 Zinc finger, GATA-type; ZIM; CCT
chr03_pseudomolecule_IMGAG_V3 39250520-39256158 E
EGN_Mt090430 20090702
Length = 309
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 32/42 (76%)
Query: 216 QREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFV 257
QR A+L +FR KRK+R ++KKVRYE R+++A + R KGQF
Sbjct: 131 QRAASLIRFRQKRKERNFDKKVRYEVRQEVALRMQRSKGQFT 172
>IMGA|Medtr2g114040.1 CCT chr02_pseudomolecule_IMGAG_V3
26879845-26881825 E EGN_Mt090430 20090702
Length = 251
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
Query: 216 QREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQVQL---PISE 266
+++ + ++R+KR R + KK++Y RK LA++RPR++G+F R ++ PI E
Sbjct: 154 EKKVRIERYRIKRNQRNFNKKIKYVCRKTLADRRPRIRGRFARNDEIDKKPIVE 207