Jatropha Genome Database

JcCB0428011.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0428011.10 + phase: 1 /partial
         (229 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g084050.1 Cupin chr01_pseudomolecule_IMGAG_V3 1682361...   117   5e-27
IMGA|Medtr7g089490.1 Cupin, RmlC-type chr07_pseudomolecule_IMGAG...    87   6e-18
IMGA|Medtr7g089480.1 Cupin, RmlC-type chr07_pseudomolecule_IMGAG...    87   9e-18
IMGA|Medtr7g089440.1 Cupin, RmlC-type chr07_pseudomolecule_IMGAG...    84   6e-17
IMGA|Medtr7g089510.1 Cupin, RmlC-type chr07_pseudomolecule_IMGAG...    81   4e-16
IMGA|Medtr7g089460.1 Cupin, RmlC-type chr07_pseudomolecule_IMGAG...    78   3e-15

>IMGA|Medtr1g084050.1 Cupin chr01_pseudomolecule_IMGAG_V3
           16823613-16821120 F EGN_Mt090430 20090702
          Length = 494

 Score =  117 bits (293), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 66/196 (33%), Positives = 103/196 (52%), Gaps = 26/196 (13%)

Query: 1   ISMIIEEKRQSFNVQRGDVLRIRAGTPLYLINRDEKEKLYVVSVMVP---VNIPGEFEIF 57
           I +++E+K + FN++ GD++R+ AGTP+YL+NRDE EKL+V ++ +P    + P   E F
Sbjct: 170 IGLVMEDKTERFNLEAGDIMRVPAGTPMYLVNRDENEKLFVAALHMPPSSASAPVNLEAF 229

Query: 58  SASGTEDSESFYEAFSWELLEAALKPPGEQIQAMSHREEGG-----------------GV 100
                 D ES   AFS ++L+AA K P  ++++    +  G                  +
Sbjct: 230 FGPAGRDPESVLTAFSSKVLQAAFKSPKGKLESFLDEQNKGRIFKIQKEDLSGLAPKKSI 289

Query: 101 WPFGTESIGPISILK-NPVFRNNYGQLFEVGSRDFKQQLRDLDLSVSVANISRASR---- 155
           WPFG +   P +I   NP F N +G LFEVG  +    L  L+L ++ ANI++ S     
Sbjct: 290 WPFGGQFKNPFNIFSNNPAFSNQFGSLFEVGPSEITSGLDGLNLMLTFANITKGSMSTIY 349

Query: 156 -NNNLEVVCFEINEEG 170
            N N   +   I+ EG
Sbjct: 350 YNTNANKIALVIDGEG 365



 Score = 74.3 bits (181), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 51/67 (76%), Gaps = 1/67 (1%)

Query: 150 ISRASRNNNLEVVCFEINEEGNTRHLLAGKNNIVNKMEKQAKELAFGVSEREVDQAFGRQ 209
           ++ AS+NNNL++VCFE+N + N +   AGKNNIV+ ++K AK+LAF  S  +VD+ F R 
Sbjct: 413 VTIASKNNNLKIVCFEVNAQRNKKLAFAGKNNIVSALDKTAKKLAFDKSAEKVDEIFKR- 471

Query: 210 NEEWFFP 216
           +EE+FFP
Sbjct: 472 DEEFFFP 478


>IMGA|Medtr7g089490.1 Cupin, RmlC-type chr07_pseudomolecule_IMGAG_V3
           19691104-19693519 F EGN_Mt090430 20090702
          Length = 464

 Score = 87.4 bits (215), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 97/194 (50%), Gaps = 41/194 (21%)

Query: 1   ISMIIEEKRQSFNVQRGDVLRIRAGTPLYLINRDEKEKLYVVSVMVPVNIPGEFEIFSAS 60
           ++++    R SFN++RGD +++ AG+  YL NRD+ + L V+ + +PVN PG+F+ FS S
Sbjct: 106 LTVLNPNNRNSFNLERGDTIKLPAGSIAYLANRDDNQDLRVLDLAIPVNRPGQFQSFSLS 165

Query: 61  GTEDSESFYEAFSWELLEAALKPPGEQIQAM--------SHR-----------EEGGGVW 101
           G+++ +SF+  FS  +LEAA     E+I+ +         HR           +E   + 
Sbjct: 166 GSQNQQSFFSGFSKNILEAAFNANYEEIERVLIEEQEQDPHRRGLRDRRHKQSQEANVIV 225

Query: 102 PFGTESI--------------------GPISIL-KNPVFRNNYGQLFEVGSRDFKQQLRD 140
               E I                     P ++  + P++ N +G  FE+ + +  QQL+D
Sbjct: 226 KVSREQIEELSRHAKSSSSRRSASSESAPFNLRSRKPIYSNEFGNFFEI-TPEKNQQLQD 284

Query: 141 LDLSVSVANISRAS 154
           LD+ V+ A I   S
Sbjct: 285 LDILVTNAEIREGS 298


>IMGA|Medtr7g089480.1 Cupin, RmlC-type chr07_pseudomolecule_IMGAG_V3
           19685905-19688725 F EGN_Mt090430 20090702
          Length = 463

 Score = 86.7 bits (213), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 41/194 (21%)

Query: 1   ISMIIEEKRQSFNVQRGDVLRIRAGTPLYLINRDEKEKLYVVSVMVPVNIPGEFEIFSAS 60
           ++++  + R SFN++RGD +++ AG+  YL NRD+ E L V+ + +PVN PG+F+ FS S
Sbjct: 106 LTVLNPDNRNSFNLERGDTIKLPAGSIAYLANRDDNEDLRVLDLAIPVNRPGKFQSFSLS 165

Query: 61  GTEDSESFYEAFSWELLEAALKPPGEQI---------QAMSHR-----------EEGGGV 100
           G+++ +SF+  FS  +LEAA     E+I         Q   HR           ++   +
Sbjct: 166 GSQNQQSFFSGFSKNILEAAFNANYEEIERVLIEEHEQEPQHRRGLRKDRRQQSQDSNVI 225

Query: 101 WPFGTESI-------------------GPISIL-KNPVFRNNYGQLFEVGSRDFKQQLRD 140
                E I                    P ++  + P++ N +G  FE+ + +   QL+D
Sbjct: 226 VKVSREQIEELSRHAKSSSRRSGSSESAPFNLRSREPIYSNEFGNFFEI-TPEKNPQLKD 284

Query: 141 LDLSVSVANISRAS 154
           LD+ V+ A I   S
Sbjct: 285 LDILVNYAEIREGS 298


>IMGA|Medtr7g089440.1 Cupin, RmlC-type chr07_pseudomolecule_IMGAG_V3
           19673450-19675846 E EGN_Mt090430 20090702
          Length = 464

 Score = 84.0 bits (206), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 94/195 (48%), Gaps = 42/195 (21%)

Query: 1   ISMIIEEKRQSFNVQRGDVLRIRAGTPLYLINRDEKEKLYVVSVMVPVNIPGEFEIFSAS 60
           ++++    R SFN++RGD +++ AGT  YL NRD+ + L V+ + +PVN PG+F+ FS S
Sbjct: 105 LTVLNPNNRNSFNLERGDTIKLPAGTLGYLANRDDNKDLRVLDLAIPVNRPGQFQSFSLS 164

Query: 61  GTEDSESFYEAFSWELLEAALKPPGEQI---------QAMSHR------------EEGGG 99
            +E+ +SF   FS  +LEAA     E+I         Q   HR            +E   
Sbjct: 165 ESENQQSFLSGFSKNILEAAFNSNYEEIERVLIEENEQEPQHRRGLRKDERRQQSQEANV 224

Query: 100 VWPFGTESI-------------------GPISIL-KNPVFRNNYGQLFEVGSRDFKQQLR 139
           +     E I                    PI++  + P++ N +G  FE+ + +   QL+
Sbjct: 225 IVKVSREQIEELSKNAKSSSRRSESSESEPINLRNQKPIYSNKFGNFFEI-TPEKNPQLK 283

Query: 140 DLDLSVSVANISRAS 154
           DLD+ V+ A I   S
Sbjct: 284 DLDILVNYAEIREGS 298


>IMGA|Medtr7g089510.1 Cupin, RmlC-type chr07_pseudomolecule_IMGAG_V3
           19701957-19704390 F EGN_Mt090430 20090702
          Length = 471

 Score = 80.9 bits (198), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 94/202 (46%), Gaps = 49/202 (24%)

Query: 1   ISMIIEEKRQSFNVQRGDVLRIRAGTPLYLINRDEKEKLYVVSVMVPVNIPGEFEIFSAS 60
           ++++    R SFN++RGD +++ AG+  YL NRD+ + L V+ + +PVN PG+F+ FS S
Sbjct: 105 LTVLNPNNRNSFNLERGDTIKLPAGSIAYLANRDDNQDLRVLDLAIPVNRPGQFQSFSLS 164

Query: 61  GTEDSESFYEAFSWELLEAALKPPGEQI-------QAMSHR-----------EEGGGVWP 102
           G ++ +SF+  FS  +LEAA     E+I       Q   HR           +E   +  
Sbjct: 165 GNQNQQSFFSGFSKNILEAAFNANYEEIERVLIEEQEPQHRRGLRDRRHKQSQEADVIVK 224

Query: 103 FGTESI-----------------------------GPISILKN-PVFRNNYGQLFEVGSR 132
              E I                              P ++  + P++ N +G  FE+ + 
Sbjct: 225 VSREQIEELSRHAKSSSRRSASSESASRRSASSESAPFNLRSHEPIYSNEFGNFFEI-TP 283

Query: 133 DFKQQLRDLDLSVSVANISRAS 154
           +   QL+DLD+ V+ A I   S
Sbjct: 284 EKNPQLQDLDILVNYAEIREGS 305


>IMGA|Medtr7g089460.1 Cupin, RmlC-type chr07_pseudomolecule_IMGAG_V3
           19678414-19680869 F EGN_Mt090430 20090702
          Length = 473

 Score = 78.2 bits (191), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 36/89 (40%), Positives = 59/89 (66%)

Query: 1   ISMIIEEKRQSFNVQRGDVLRIRAGTPLYLINRDEKEKLYVVSVMVPVNIPGEFEIFSAS 60
           ++++    R SFN++RGD +++ AG+  YL NR + E L V+ + +PVN PG+F+ FS S
Sbjct: 105 LTVLNPNDRNSFNLERGDTIKLPAGSIAYLANRADNEDLRVLDLAIPVNRPGQFQSFSLS 164

Query: 61  GTEDSESFYEAFSWELLEAALKPPGEQIQ 89
           G ++ +SF+  FS  +LEAA     E+I+
Sbjct: 165 GNQNQQSFFSGFSKNILEAAFNSNYEEIE 193