Jatropha Genome Database

JcCB0425751.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0425751.10 + phase: 0 /partial/short
         (44 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g148810.1 YjeF-related protein, N-terminal; Pyridoxam...    83   3e-17

>IMGA|Medtr3g148810.1 YjeF-related protein, N-terminal; Pyridoxamine
           5-phosphate oxidase, FMN-binding
           chr03_pseudomolecule_IMGAG_V3 38760438-38767109 E
           EGN_Mt090430 20090702
          Length = 467

 Score = 82.8 bits (203), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 35/44 (79%), Positives = 39/44 (88%)

Query: 1   MVLLKGVDKDGFVWFTNYESRKAHELSENPRAALLFYWDGLNRQ 44
           +VLLKG DKDGFVWFTNYES+K   LSENP A++LFYWDGLNRQ
Sbjct: 312 IVLLKGFDKDGFVWFTNYESQKGRALSENPHASILFYWDGLNRQ 355