Jatropha Genome Database

JcCB0425721.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0425721.10 - phase: 0 /pseudo/partial
         (445 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g046480.1 BTB/POZ; chr02_pseudomolecule_IMGAG_V3 1300...   453   e-128
IMGA|Medtr2g034520.1 BTB/POZ; chr02_pseudomolecule_IMGAG_V3 9665...   315   2e-86
IMGA|Medtr5g097890.1 BTB/POZ; chr05_pseudomolecule_IMGAG_V3 3900...   294   5e-80
IMGA|Medtr7g107020.1 BTB/POZ; chr07_pseudomolecule_IMGAG_V3 2494...   158   6e-39
IMGA|Medtr2g055950.1 Ankyrin chr02_pseudomolecule_IMGAG_V3 15102...    49   7e-06

>IMGA|Medtr2g046480.1 BTB/POZ; chr02_pseudomolecule_IMGAG_V3
           13008286-13005730 H EGN_Mt090430 20090702
          Length = 624

 Score =  453 bits (1166), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 267/486 (54%), Positives = 321/486 (66%), Gaps = 68/486 (13%)

Query: 4   RIGFSD-SNEISNGSST--CCIETLSTPNPPNPEISA----------LQQLSKSLESIXX 50
           R GFS+ SNEISN +S+  CC         PN  I+A          L +LS +L SI  
Sbjct: 5   RSGFSEYSNEISNNTSSELCC------TTAPNSTITASQDVITFTQPLNRLSDNLASILD 58

Query: 51  XXXXXXXXXXKITISASNREVPVHRCILSARSPFFKAVFSGSAAKEKGQNFEVKELAKDY 110
                     KI I+   REV VHRCILSARS FFK VF G    +K    ++KE+AKDY
Sbjct: 59  DTGFDFFSDAKI-IAKDGREVSVHRCILSARSSFFKDVFKG----KKETTLQLKEVAKDY 113

Query: 111 DIGFDSIVTVLSYLYNGKVRPL---PKGVCVCVDEDCSHVACRPAVDFMVEVLYAAFTFQ 167
           D+GFD++  VL YLY+ +V       K VCVCVD+DC H  C P VDFM+++LYA+FTFQ
Sbjct: 114 DVGFDALNVVLRYLYSERVEDHHLSAKDVCVCVDDDCLHFGCWPVVDFMLQLLYASFTFQ 173

Query: 168 VPELVALYQR----------------------------------------HLLDILEKVA 187
           + EL+ALYQ                                         HLLDIL+K+A
Sbjct: 174 ISELLALYQSGALKLPHRQGQGRGLIILVYCTQSYPVFLHKRLFLRLEPDHLLDILDKMA 233

Query: 188 IDDILVVLSVANICGKACEKLLTRCIEIVVKSYVDIVTLDKALPQNIVKQITDSRLEIAS 247
           IDD+LVVLS+ANICGK C+KLL RC +I+V+S VDI TL+K+LPQ+IVK +T  R ++  
Sbjct: 234 IDDMLVVLSIANICGKTCDKLLKRCTDIIVESNVDITTLEKSLPQSIVKLVTYKRKQLGL 293

Query: 248 DTPQTTSYPDKHIKRIHRALDSDDVELVRMLLKEAHTNLDDAHALHYAVAYCDAKTTTEL 307
           D  +T +  DKH+ RIHRALDSDDVELVR+LLKE HT LD+AHALHYAVAYCD KTTTEL
Sbjct: 294 DMYETVNLLDKHVTRIHRALDSDDVELVRLLLKEGHTTLDEAHALHYAVAYCDVKTTTEL 353

Query: 308 LDLGIADVNCRNLRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTSDGRKALQISKRLTR 367
           LDLG+ADVN +NLRGY+VLHVAA RKEPKIIVSLLTKGA+PS+LT DGRKALQISKR T+
Sbjct: 354 LDLGLADVNHKNLRGYSVLHVAAKRKEPKIIVSLLTKGAQPSELTMDGRKALQISKRCTK 413

Query: 368 ASDYYKSIEEGKASPKERLCIEILEQAERRDPLLGEA-FSFSCYGWRLDWQKFYSPWKQK 426
           A DYYKS EEGK S  +RLCIEILEQAERR+PL GEA  S +  G  L  +  Y   +  
Sbjct: 414 AVDYYKSTEEGKVSSNDRLCIEILEQAERREPLHGEASLSLAKAGDDLRMKLLYLENRVG 473

Query: 427 LQWILL 432
           L  +L 
Sbjct: 474 LAKLLF 479


>IMGA|Medtr2g034520.1 BTB/POZ; chr02_pseudomolecule_IMGAG_V3
           9665833-9660630 E EGN_Mt090430 20090702
          Length = 589

 Score =  315 bits (808), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 169/397 (42%), Positives = 252/397 (63%), Gaps = 14/397 (3%)

Query: 13  ISNGSSTCCIETLSTPNPPNPEISALQQLSKSLESIXXXXXXXXXXXXKITISASNREVP 72
           +SNGS +  I    + +  N E+ +L +LS +LE +               I      V 
Sbjct: 20  LSNGSISHNICPNGSDHARNLEVISLNKLSSNLEQLLIDSDYDYGDA---DIIVEGIPVR 76

Query: 73  VHRCILSARSPFFKAVFSGSAAKEKGQN-----FEVKELAKDYDIGFDSIVTVLSYLYNG 127
           +HRCIL +RS FF  +F  S  K   +N     + + +L     +G+++ +  LSY+Y+G
Sbjct: 77  IHRCILGSRSKFFHEIFKRSKDKGLSKNEGRLKYCLSDLLPYGKVGYEAFLIFLSYVYSG 136

Query: 128 KVRPLPKGVCVCVDEDCSHVACRPAVDFMVEVLYAAFTFQVPELVALYQRHLLDILEKVA 187
           K++P P  V  CVD  C+H AC PA++F VE++YA+  FQ+PELV+L+QR LL+ + K  
Sbjct: 137 KLKPSPMEVSTCVDNVCAHDACGPAINFAVELMYASSIFQIPELVSLFQRRLLNFVGKAL 196

Query: 188 IDDILVVLSVANICGKACEKLLTRCIEIVVKSYVDIVTLDKALPQNIVKQITDSRLEI-- 245
           ++D++ +L  +  C     +L  +C++ V +S +D ++++K LP  + +++   R ++  
Sbjct: 197 VEDVISILMASFHC--QLNQLAAQCVDRVARSDLDQISIEKELPHELSEKVKLLRRDLHQ 254

Query: 246 --ASDTPQTTSYPDKHIKRIHRALDSDDVELVRMLLKEAHTNLDDAHALHYAVAYCDAKT 303
              +D P   +   K I RIH+ALDSDDVELV++LL E+   LD+A ALHYAVA+CD K 
Sbjct: 255 NDENDAPVVDTLSLKRITRIHKALDSDDVELVKLLLNESDITLDEAGALHYAVAHCDPKV 314

Query: 304 TTELLDLGIADVNCRNLRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTSDGRKALQISK 363
            +E+L LG+A+VN RN RGYTVLH+AAMRKEP IIVSLLTKGA  SDLT DG+ A+ I +
Sbjct: 315 VSEVLGLGLANVNLRNSRGYTVLHIAAMRKEPSIIVSLLTKGACASDLTFDGQSAVSICR 374

Query: 364 RLTRASDYYKSIEEGKASPKERLCIEILEQAERRDPL 400
           RLTR  DY+   E+GK + K+R+CI++LE+  RR+PL
Sbjct: 375 RLTRPKDYHTKTEQGKETNKDRICIDVLEREMRRNPL 411


>IMGA|Medtr5g097890.1 BTB/POZ; chr05_pseudomolecule_IMGAG_V3
           39008022-39011867 E EGN_Mt090430 20090702
          Length = 594

 Score =  294 bits (753), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 167/403 (41%), Positives = 248/403 (61%), Gaps = 24/403 (5%)

Query: 15  NGSSTCCIETLSTPNP----PNPEISALQQLSKSLESIXXXXXXXXXXXXKITISASNRE 70
           N SS     T ST N      N EI +L +LS SLE +             +       E
Sbjct: 21  NASSNNHNITSSTNNEHVAMANTEIVSLNKLSGSLEKLLSDVDYDYCDAEILV-----EE 75

Query: 71  VPV--HRCILSARSPFFKAVFS----GSAAKEKGQ-NFEVKELAKDYDIGFDSIVTVLSY 123
           +PV  HRCIL++RS FF  +F     G     KG+  + +KEL     +G+++ +  L Y
Sbjct: 76  IPVGIHRCILASRSQFFHELFKKGKDGEVKDGKGKPRYLMKELVPYGSVGYEAFIVFLHY 135

Query: 124 LYNGKVRPLPKGVCVCVDEDCSHVACRPAVDFMVEVLYAAFTFQVPELVALYQRHLLDIL 183
           LY GK++  P  V  CVDE C H +CRPA++F +E++YA+ TFQ+ EL  ++QR LL+ +
Sbjct: 136 LYTGKLKAPPPEVTTCVDEACIHDSCRPAINFALELMYASSTFQMKELALVFQRCLLNYV 195

Query: 184 EKVAIDDILVVLSVANICGKACEKLLTRCIEIVVKSYVDIVTLDKALPQNIVKQITDSRL 243
           +K  ++D++ +L  A+ C +  ++LL+ CI+ V +S ++I+ L++ LP  +V +I   R+
Sbjct: 196 DKALVEDVIPILMAAHHCKQ--DQLLSHCIQRVARSDMEIIYLERELPHEVVTEIKSLRV 253

Query: 244 E-IASDTPQTTSY-----PDKHIKRIHRALDSDDVELVRMLLKEAHTNLDDAHALHYAVA 297
           + +   TP +         DK I++I +ALDSDDVEL+++LL E+   LDDA+ALHYA A
Sbjct: 254 QSLPESTPDSMEVEPVIVSDKSIRKILKALDSDDVELLKLLLDESSVTLDDAYALHYACA 313

Query: 298 YCDAKTTTELLDLGIADVNCRNLRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTSDGRK 357
           YCD+K   E+L LG+AD+  +N RGYTVLHVAA RK+P I+V+LL  GA  S+ T DG+ 
Sbjct: 314 YCDSKVVQEVLTLGLADILLKNPRGYTVLHVAARRKDPSILVALLKNGACASETTLDGQT 373

Query: 358 ALQISKRLTRASDYYKSIEEGKASPKERLCIEILEQAERRDPL 400
           AL I +RLTR  DY++    GK S K+RLC+++LE+  RR  +
Sbjct: 374 ALSICQRLTRRKDYHEKTATGKESHKDRLCVDVLEREMRRSSM 416


>IMGA|Medtr7g107020.1 BTB/POZ; chr07_pseudomolecule_IMGAG_V3
           24949483-24955287 E EGN_Mt090430 20090702
          Length = 525

 Score =  158 bits (399), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 120/366 (32%), Positives = 177/366 (48%), Gaps = 37/366 (10%)

Query: 62  ITISASNREVPVHRCILSARSPFFKAVFSG----SAAKEKGQNFEVKELAKD-----YDI 112
           +  S   R V  HRCIL+ARS FF+  F G    S     G        A+        +
Sbjct: 27  VVFSVEGRLVHAHRCILAARSLFFRKFFCGPDPPSGLDPSGNRVNPSGSARSGVIPVNSV 86

Query: 113 GFDSIVTVLSYLYNGKVRPLPKG---VCVCVDEDCSHVACRPAVDFMVEVLYAAFTFQVP 169
           G++  + +L +LY+G+V  +P+       C D  C H  C  AVD  ++ L AA  F V 
Sbjct: 87  GYEVFLLMLQFLYSGQVSIVPQKHEPRPNCGDRGCWHTHCTSAVDLALDTLAAARYFGVE 146

Query: 170 ELVALYQRHLLDILEKVAIDDILVVLSVANICGKACEKLLTRCIEIVVKSYVDIVTLDKA 229
           +L  L Q+ L  ++EK +I+D++ VL  +    +   +L T C  +V KS +    L K 
Sbjct: 147 QLALLTQKQLASMVEKASIEDVMKVLLASR--KQDMHQLWTTCSHLVAKSGLPPEVLAKH 204

Query: 230 LPQNIVKQITDSRLEIA----------------SDTPQTTSYPDKHIKRIHRALDSDDVE 273
           LP +I+ +I + R++ +                          D+ I+R+ RALDS DVE
Sbjct: 205 LPIDIIAKIEELRIKTSLSRRSLMPHHHHPHHHDHLTAAADLEDQKIRRMRRALDSSDVE 264

Query: 274 LVRMLLKEAHTNLDDAHALHYAVAYCDAKTTTELLDLGIADVNC-RNLRGYTVLHVAAMR 332
           LV++++     NLD+A AL YAV  C  +    LL+LG ADVN      G T LH+AA  
Sbjct: 265 LVKLMVMGEGLNLDEALALPYAVENCSREVVKALLELGAADVNFPAGPTGKTPLHIAAEM 324

Query: 333 KEPKIIVSLLTKGARPSDLTSDGRKALQISKRLTRASDY-YKSIEEGKAS---PKERLCI 388
             P ++  LL   A P+  T DG   L I + LT  SD+ +K    G       K RLC+
Sbjct: 325 VSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLT--SDFLFKGAVPGLTHIEPNKLRLCL 382

Query: 389 EILEQA 394
           E+++ A
Sbjct: 383 ELVQSA 388


>IMGA|Medtr2g055950.1 Ankyrin chr02_pseudomolecule_IMGAG_V3
           15102819-15107720 E EGN_Mt090430 20090702
          Length = 317

 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 51/104 (49%), Gaps = 5/104 (4%)

Query: 263 IHRALDSDDVELVRMLLKEAHT----NLDDAHALHYAVAYCDAKTTTELLDLGIADVNCR 318
           +H+A+      ++  LL++  +    + D A  LHYAV    AK T +LL     DVN  
Sbjct: 193 LHKAVIGKKEAVISHLLRKGASPHIQDKDGATPLHYAVE-VGAKQTVKLLIKYNVDVNVA 251

Query: 319 NLRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTSDGRKALQIS 362
           +  G+T LHVA   +   I   LL  GA  S    DG+ AL IS
Sbjct: 252 DNEGWTPLHVAVQSRNRDIAKILLANGADRSTENKDGKTALDIS 295