Jatropha Genome Database

JcCB0424591.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0424591.10 - phase: 0 /partial
         (111 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g117010.1 Protein of unknown function DUF662 chr01_ps...   103   2e-23
IMGA|Medtr7g126780.2 Protein of unknown function DUF662 chr07_ps...    92   7e-20
IMGA|Medtr7g126780.1 Protein of unknown function DUF662 chr07_ps...    87   1e-18

>IMGA|Medtr1g117010.1 Protein of unknown function DUF662
           chr01_pseudomolecule_IMGAG_V3 24925082-24926710 E
           EGN_Mt090430 20090702
          Length = 176

 Score =  103 bits (257), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 53/82 (64%), Positives = 58/82 (70%)

Query: 27  SRFAISTFQAXXXXXXXXXXXXXXXXXLQLGRAEEETRRLTQIWEELEVMCDPMRKEVAM 86
           S+ AIST QA                 LQLGRAEEETRRL  IWEELEVM DPMRKEVAM
Sbjct: 41  SKLAISTLQAKEEEIERRKMEVKERVELQLGRAEEETRRLAHIWEELEVMEDPMRKEVAM 100

Query: 87  VRKKIDLANRELKPLGQSCQKK 108
           VRKKIDLAN+++K LGQ+ QKK
Sbjct: 101 VRKKIDLANKDVKQLGQNYQKK 122


>IMGA|Medtr7g126780.2 Protein of unknown function DUF662
           chr07_pseudomolecule_IMGAG_V3 29526707-29524191 E
           EGN_Mt090430 20090702
          Length = 168

 Score = 92.0 bits (227), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 45/82 (54%), Positives = 54/82 (65%)

Query: 27  SRFAISTFQAXXXXXXXXXXXXXXXXXLQLGRAEEETRRLTQIWEELEVMCDPMRKEVAM 86
           SR A+STF+A                  QLGR EEET+RL  I EELE + DPMRKEV++
Sbjct: 34  SRSALSTFRAKEEEIEKKKMEVRDKVQFQLGRVEEETKRLATIREELEALADPMRKEVSL 93

Query: 87  VRKKIDLANRELKPLGQSCQKK 108
           VRK+ID  N+ELKPLG +CQKK
Sbjct: 94  VRKRIDSVNKELKPLGHTCQKK 115


>IMGA|Medtr7g126780.1 Protein of unknown function DUF662
           chr07_pseudomolecule_IMGAG_V3 29526707-29524191 E
           EGN_Mt090430 20090702
          Length = 171

 Score = 87.4 bits (215), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 44/85 (51%), Positives = 55/85 (64%), Gaps = 3/85 (3%)

Query: 27  SRFAISTFQAXXXXXXXXXXXXXXXXXLQLGRAEEETRRLTQI---WEELEVMCDPMRKE 83
           SR A+STF+A                  QLGR EEET+RL  I   ++ELE + DPMRKE
Sbjct: 34  SRSALSTFRAKEEEIEKKKMEVRDKVQFQLGRVEEETKRLATIREEYQELEALADPMRKE 93

Query: 84  VAMVRKKIDLANRELKPLGQSCQKK 108
           V++VRK+ID  N+ELKPLG +CQKK
Sbjct: 94  VSLVRKRIDSVNKELKPLGHTCQKK 118