Jatropha Genome Database

JcCB0421511.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0421511.10 + phase: 1 /pseudo/partial
         (162 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g150700.1 Octicosapeptide/Phox/Bem1p; CBS chr03_pseud...   119   5e-28
IMGA|Medtr4g144000.1 Octicosapeptide/Phox/Bem1p; CBS chr04_pseud...    72   1e-13
IMGA|Medtr3g142510.2 Octicosapeptide/Phox/Bem1p; CBS chr03_pseud...    64   3e-11
IMGA|Medtr3g142510.1 Octicosapeptide/Phox/Bem1p; CBS chr03_pseud...    63   6e-11

>IMGA|Medtr3g150700.1 Octicosapeptide/Phox/Bem1p; CBS
           chr03_pseudomolecule_IMGAG_V3 39759172-39751273 E
           EGN_Mt090430 20090702
          Length = 528

 Score =  119 bits (299), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 56/82 (68%), Positives = 68/82 (82%)

Query: 30  LKLKTRRAGCTVFTCDTRSLTDLITSILQRLGDDIDRNNLPQILYEDEDHDKVVLESDSD 89
            K++ ++     FTCDTRS+T++I+SILQRLG DID NNLP ILYEDEDHDKVVL SDSD
Sbjct: 398 FKVQDKKGRMHRFTCDTRSMTEVISSILQRLGTDIDPNNLPHILYEDEDHDKVVLASDSD 457

Query: 90  LVTAVDHAKSAGLKGLRLHLDY 111
           L  AVDHA++ GLKGL+L+LDY
Sbjct: 458 LAAAVDHARTVGLKGLKLYLDY 479


>IMGA|Medtr4g144000.1 Octicosapeptide/Phox/Bem1p; CBS
           chr04_pseudomolecule_IMGAG_V3 36108463-36117248 E
           EGN_Mt090430 20090702
          Length = 534

 Score = 72.4 bits (176), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/70 (45%), Positives = 54/70 (77%), Gaps = 2/70 (2%)

Query: 42  FTCDTRSLTDLITSILQRLGDDIDRNNLPQILYEDEDHDKVVLESDSDLVTAVDHAKSAG 101
           F C T  L +L+++++QR+  DI+    P I+YED++ D++VL +D+DLV+AV +A+SAG
Sbjct: 419 FNCGTEHLDELVSAVMQRV--DINDRERPAIVYEDDEGDRIVLGTDNDLVSAVSYARSAG 476

Query: 102 LKGLRLHLDY 111
           +K L+L+LD+
Sbjct: 477 VKALKLYLDF 486


>IMGA|Medtr3g142510.2 Octicosapeptide/Phox/Bem1p; CBS
           chr03_pseudomolecule_IMGAG_V3 36543726-36536896 E
           EGN_Mt090430 20090702
          Length = 293

 Score = 64.3 bits (155), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 53/70 (75%), Gaps = 1/70 (1%)

Query: 42  FTCDTRSLTDLITSILQRLGDDIDRNNLPQILYEDEDHDKVVLESDSDLVTAVDHAKSAG 101
           FT  + +  +L+++++QR+G  ++    P++LYED++ DK+++ +++DL  AV +A+SAG
Sbjct: 177 FTSGSENQDELVSAVMQRIGP-VNDGERPRLLYEDDEGDKIIIATNNDLAAAVSYARSAG 235

Query: 102 LKGLRLHLDY 111
           LK L+L+L++
Sbjct: 236 LKALKLNLEF 245


>IMGA|Medtr3g142510.1 Octicosapeptide/Phox/Bem1p; CBS
           chr03_pseudomolecule_IMGAG_V3 36543726-36536896 E
           EGN_Mt090430 20090702
          Length = 519

 Score = 63.2 bits (152), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 26/70 (37%), Positives = 53/70 (75%), Gaps = 1/70 (1%)

Query: 42  FTCDTRSLTDLITSILQRLGDDIDRNNLPQILYEDEDHDKVVLESDSDLVTAVDHAKSAG 101
           FT  + +  +L+++++QR+G  ++    P++LYED++ DK+++ +++DL  AV +A+SAG
Sbjct: 403 FTSGSENQDELVSAVMQRIGP-VNDGERPRLLYEDDEGDKIIIATNNDLAAAVSYARSAG 461

Query: 102 LKGLRLHLDY 111
           LK L+L+L++
Sbjct: 462 LKALKLNLEF 471