Jatropha Genome Database

JcCB0420431.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0420431.10 + phase: 2 /partial
         (112 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g145150.1 ATP phosphoribosyltransferase; ; chr08_pseu...    90   3e-19
IMGA|Medtr2g005840.2 ATP phosphoribosyltransferase; ; chr02_pseu...    79   6e-16
IMGA|Medtr2g005840.1 ATP phosphoribosyltransferase; ; chr02_pseu...    79   6e-16

>IMGA|Medtr8g145150.1 ATP phosphoribosyltransferase; ;
           chr08_pseudomolecule_IMGAG_V3 35226220-35220908 E
           EGN_Mt090430 20090702
          Length = 373

 Score = 90.1 bits (222), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 48/69 (69%), Gaps = 2/69 (2%)

Query: 46  PVFCCIXXXXXXXXXXXXXTRAS--ERNEIRLGLPSKGRMASDTIDLLKDCQLSVKQVNP 103
           P++CC                 +   R EIRLGLPSKGRM+SDT+DLLKDCQLSVKQVNP
Sbjct: 11  PLYCCYASSTSISETHHQVLNGNTVSRQEIRLGLPSKGRMSSDTLDLLKDCQLSVKQVNP 70

Query: 104 RQYVAQIPQ 112
           RQYVAQIPQ
Sbjct: 71  RQYVAQIPQ 79


>IMGA|Medtr2g005840.2 ATP phosphoribosyltransferase; ;
           chr02_pseudomolecule_IMGAG_V3 432467-428965 E
           EGN_Mt090430 20090702
          Length = 363

 Score = 79.0 bits (193), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 35/37 (94%), Positives = 37/37 (100%)

Query: 76  GLPSKGRMASDTIDLLKDCQLSVKQVNPRQYVAQIPQ 112
           GLPSKGRM+SDT+DLLKDCQLSVKQVNPRQYVAQIPQ
Sbjct: 43  GLPSKGRMSSDTLDLLKDCQLSVKQVNPRQYVAQIPQ 79


>IMGA|Medtr2g005840.1 ATP phosphoribosyltransferase; ;
           chr02_pseudomolecule_IMGAG_V3 432467-428965 E
           EGN_Mt090430 20090702
          Length = 367

 Score = 78.6 bits (192), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 35/37 (94%), Positives = 37/37 (100%)

Query: 76  GLPSKGRMASDTIDLLKDCQLSVKQVNPRQYVAQIPQ 112
           GLPSKGRM+SDT+DLLKDCQLSVKQVNPRQYVAQIPQ
Sbjct: 43  GLPSKGRMSSDTLDLLKDCQLSVKQVNPRQYVAQIPQ 79