Jatropha Genome Database

JcCB0418191.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0418191.10 + phase: 0 /pseudo/partial
         (166 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g130010.1 Histidinol dehydrogenase chr02_pseudomolecu...   147   3e-36

>IMGA|Medtr2g130010.1 Histidinol dehydrogenase
           chr02_pseudomolecule_IMGAG_V3 31578373-31584802 E
           EGN_Mt090430 20090702
          Length = 478

 Score =  147 bits (371), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 71/95 (74%), Positives = 78/95 (82%)

Query: 30  QNSEAMISIDMPAGPSEVLVIADKHASPVHIAADLLSQAEHGPDSQXXXXXXXXXXXXKA 89
           QNSEAM+SIDMPAGPSEVLVIADKHA P H+AADLLSQAEHGPDSQ             A
Sbjct: 262 QNSEAMVSIDMPAGPSEVLVIADKHAIPSHVAADLLSQAEHGPDSQVVLVIAGDGVDQNA 321

Query: 90  IEEEISKQCQSLPRGEYASKALSHSFTVFARDMVE 124
           I+EE+SKQCQSLPRGE+A+KALSHSF V ARDM+E
Sbjct: 322 IQEEVSKQCQSLPRGEFAAKALSHSFIVHARDMLE 356