Jatropha Genome Database

JcCB0418081.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0418081.10 - phase: 0 /partial
         (108 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g125160.1 HAD-superfamily hydrolase subfamily IA, var...    72   6e-14

>IMGA|Medtr4g125160.1 HAD-superfamily hydrolase subfamily IA,
           variant 3; Epoxide hydrolase N-terminal domain-like
           phosphatase chr04_pseudomolecule_IMGAG_V3
           29456179-29450309 E EGN_Mt090430 20090702
          Length = 408

 Score = 72.4 bits (176), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 38/76 (50%), Positives = 51/76 (67%), Gaps = 1/76 (1%)

Query: 31  VYAVILDLDGTLLDTESATKGVLKEFLAKYGKELDKEREESKRLGMTLQDSAVAIVKDYG 90
           +  VILDLDGTLL+T+     VLK  L KYGKE D  RE  K +G T  ++A A+V+DYG
Sbjct: 8   IKCVILDLDGTLLNTDGIVCNVLKVSLGKYGKEWDG-RETLKIVGKTPLEAASAVVEDYG 66

Query: 91  LPLTPDQFIHEIMPMY 106
           LP +P +F+ E+ P +
Sbjct: 67  LPCSPIEFVSELSPQF 82