Jatropha Genome Database

JcCB0416831.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0416831.10 - phase: 0 /pseudo
         (96 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g018570.1 Terpenoid cylases/protein prenyltransferase...   117   1e-27
IMGA|Medtr8g018660.1 Terpenoid cylases/protein prenyltransferase...   115   6e-27
IMGA|Medtr8g018620.1 Terpenoid cylases/protein prenyltransferase...   113   2e-26
IMGA|Medtr4g163370.1 Prenyltransferase/squalene oxidase chr04_ps...   107   2e-24
IMGA|Medtr4g163370.2 Prenyltransferase/squalene oxidase chr04_ps...   107   2e-24
IMGA|Medtr8g018550.1 Prenyltransferase/squalene oxidase chr08_ps...   102   4e-23
IMGA|Medtr5g008860.1 Prenyltransferase/squalene oxidase chr05_ps...    80   3e-16
IMGA|Medtr6g099000.1 Prenyltransferase/squalene oxidase chr06_ps...    64   2e-11
IMGA|Medtr6g099000.2 Prenyltransferase/squalene oxidase chr06_ps...    64   2e-11

>IMGA|Medtr8g018570.1 Terpenoid cylases/protein prenyltransferase
          alpha-alpha toroid chr08_pseudomolecule_IMGAG_V3
          3394564-3394343 E EGN_Mt090430 20090702
          Length = 73

 Score =  117 bits (294), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 48/70 (68%), Positives = 65/70 (92%)

Query: 1  MWRLRVAEGGNDPYIYSTNNFLGRQIWEFDSDAGSPEEREEVEKSRQNYWNNRFQIKPSS 60
          MWRL++A+GG DPYI+STNNF+GRQ WEFD+DAG+PEER +VEK+RQ++++NRF++KP S
Sbjct: 1  MWRLKIADGGKDPYIFSTNNFVGRQTWEFDADAGTPEERSQVEKARQHFYDNRFKVKPCS 60

Query: 61 DLLWQFQVYM 70
          DLLW+FQV +
Sbjct: 61 DLLWRFQVII 70


>IMGA|Medtr8g018660.1 Terpenoid cylases/protein prenyltransferase
          alpha-alpha toroid chr08_pseudomolecule_IMGAG_V3
          3445206-3444949 E EGN_Mt090430 20090702
          Length = 85

 Score =  115 bits (287), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 48/70 (68%), Positives = 64/70 (91%)

Query: 1  MWRLRVAEGGNDPYIYSTNNFLGRQIWEFDSDAGSPEEREEVEKSRQNYWNNRFQIKPSS 60
          MWRL++A+GGNDP+I+STNNFLGRQ WEFD +AG+ EER +VEK+RQ+++NNRF++KP S
Sbjct: 1  MWRLKIADGGNDPHIFSTNNFLGRQTWEFDPNAGTSEERAQVEKARQHFYNNRFKVKPCS 60

Query: 61 DLLWQFQVYM 70
          DLLW+FQV +
Sbjct: 61 DLLWRFQVII 70


>IMGA|Medtr8g018620.1 Terpenoid cylases/protein prenyltransferase
          alpha-alpha toroid chr08_pseudomolecule_IMGAG_V3
          3414826-3414226 E EGN_Mt090430 20090702
          Length = 68

 Score =  113 bits (283), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 48/67 (71%), Positives = 62/67 (92%)

Query: 1  MWRLRVAEGGNDPYIYSTNNFLGRQIWEFDSDAGSPEEREEVEKSRQNYWNNRFQIKPSS 60
          MWRL++A+GGNDPYI+STNNFLGRQ WEFD +AG+ EER +VEK+RQ+++NNRF++KP S
Sbjct: 1  MWRLKIADGGNDPYIFSTNNFLGRQTWEFDPNAGTSEERAQVEKARQHFYNNRFKVKPCS 60

Query: 61 DLLWQFQ 67
          DLLW+FQ
Sbjct: 61 DLLWRFQ 67


>IMGA|Medtr4g163370.1 Prenyltransferase/squalene oxidase
          chr04_pseudomolecule_IMGAG_V3 41405062-41412055 E
          EGN_Mt090430 20090702
          Length = 771

 Score =  107 bits (266), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 42/75 (56%), Positives = 63/75 (84%)

Query: 1  MWRLRVAEGGNDPYIYSTNNFLGRQIWEFDSDAGSPEEREEVEKSRQNYWNNRFQIKPSS 60
          MW+L++ EG N+PY++STNNF+GRQ WE+D +AGS EER +VE++R+N+++NRF++KP  
Sbjct: 1  MWKLKIGEGKNEPYLFSTNNFVGRQTWEYDPEAGSEEERAQVEEARKNFYDNRFKVKPCG 60

Query: 61 DLLWQFQVYMKPPFL 75
          DLLW+FQV  +  F+
Sbjct: 61 DLLWRFQVLRENNFM 75


>IMGA|Medtr4g163370.2 Prenyltransferase/squalene oxidase
          chr04_pseudomolecule_IMGAG_V3 41405062-41412055 E
          EGN_Mt090430 20090702
          Length = 527

 Score =  107 bits (266), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 42/75 (56%), Positives = 63/75 (84%)

Query: 1  MWRLRVAEGGNDPYIYSTNNFLGRQIWEFDSDAGSPEEREEVEKSRQNYWNNRFQIKPSS 60
          MW+L++ EG N+PY++STNNF+GRQ WE+D +AGS EER +VE++R+N+++NRF++KP  
Sbjct: 1  MWKLKIGEGKNEPYLFSTNNFVGRQTWEYDPEAGSEEERAQVEEARKNFYDNRFKVKPCG 60

Query: 61 DLLWQFQVYMKPPFL 75
          DLLW+FQV  +  F+
Sbjct: 61 DLLWRFQVLRENNFM 75


>IMGA|Medtr8g018550.1 Prenyltransferase/squalene oxidase
          chr08_pseudomolecule_IMGAG_V3 3386915-3381869 E
          EGN_Mt090430 20090702
          Length = 564

 Score =  102 bits (255), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 43/74 (58%), Positives = 59/74 (79%)

Query: 1  MWRLRVAEGGNDPYIYSTNNFLGRQIWEFDSDAGSPEEREEVEKSRQNYWNNRFQIKPSS 60
          M RL++A+GG DPYI+S NNF+GRQ WEFD DAG+PEER +VE + +N+++N F +KP S
Sbjct: 1  MRRLKIADGGKDPYIFSLNNFVGRQTWEFDLDAGTPEERAQVETAHKNFYDNCFYVKPCS 60

Query: 61 DLLWQFQVYMKPPF 74
          DLLW+FQ+  +  F
Sbjct: 61 DLLWRFQILRENNF 74


>IMGA|Medtr5g008860.1 Prenyltransferase/squalene oxidase
          chr05_pseudomolecule_IMGAG_V3 1770254-1758822 E
          EGN_Mt090430 20090702
          Length = 757

 Score = 79.7 bits (195), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 36/74 (48%), Positives = 53/74 (71%), Gaps = 1/74 (1%)

Query: 1  MWRLRVAEGGNDPYIYSTNNFLGRQIWEFDSDAGSPEEREEVEKSRQNYWNNRFQIKPSS 60
          MW+L+VAEGG+ P++ + NN +GRQ+WEFD ++GSP++  ++E  RQN+ NNRF  K S 
Sbjct: 1  MWKLKVAEGGS-PWLRTLNNHVGRQLWEFDPNSGSPQDLADIESVRQNFRNNRFSHKHSD 59

Query: 61 DLLWQFQVYMKPPF 74
          DLL + Q   + P 
Sbjct: 60 DLLMRIQFAKENPM 73


>IMGA|Medtr6g099000.1 Prenyltransferase/squalene oxidase
          chr06_pseudomolecule_IMGAG_V3 21643111-21635981 H
          EGN_Mt090430 20090702
          Length = 772

 Score = 63.9 bits (154), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 49/73 (67%), Gaps = 2/73 (2%)

Query: 1  MWRLRVAEG--GNDPYIYSTNNFLGRQIWEFDSDAGSPEEREEVEKSRQNYWNNRFQIKP 58
          MW+L+ ++   G +  + S N  +GRQ WE+D + G+ ++R +VE++R+ +  NRF+ K 
Sbjct: 1  MWKLKFSKNKDGTEELVRSVNKNIGRQFWEYDPNLGTEQKRAQVEQARKQFHENRFKTKN 60

Query: 59 SSDLLWQFQVYMK 71
          SSDLL + QV M+
Sbjct: 61 SSDLLMRLQVKME 73


>IMGA|Medtr6g099000.2 Prenyltransferase/squalene oxidase
          chr06_pseudomolecule_IMGAG_V3 21643111-21635981 H
          EGN_Mt090430 20090702
          Length = 684

 Score = 63.5 bits (153), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 49/73 (67%), Gaps = 2/73 (2%)

Query: 1  MWRLRVAEG--GNDPYIYSTNNFLGRQIWEFDSDAGSPEEREEVEKSRQNYWNNRFQIKP 58
          MW+L+ ++   G +  + S N  +GRQ WE+D + G+ ++R +VE++R+ +  NRF+ K 
Sbjct: 1  MWKLKFSKNKDGTEELVRSVNKNIGRQFWEYDPNLGTEQKRAQVEQARKQFHENRFKTKN 60

Query: 59 SSDLLWQFQVYMK 71
          SSDLL + QV M+
Sbjct: 61 SSDLLMRLQVKME 73