Jatropha Genome Database

JcCB0403471.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0403471.20 + phase: 0 /partial
         (245 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g024040.1 Fumarate reductase/succinate dehydrogenase ...   218   2e-57
IMGA|Medtr5g017270.1 FAD-dependent pyridine nucleotide-disulphid...   202   1e-52
IMGA|CU571152_22.1 Forkhead-associated CU571152.5 100554-94827 E...   200   6e-52

>IMGA|Medtr4g024040.1 Fumarate reductase/succinate dehydrogenase
           flavoprotein, N-terminal chr04_pseudomolecule_IMGAG_V3
           5419751-5415352 E EGN_Mt090430 20090702
          Length = 465

 Score =  218 bits (556), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 100/151 (66%), Positives = 125/151 (82%)

Query: 72  KHKGFDVKVFEKDLSAVRGEGKHRGPIXXXXXXXXXXXXIDKQVAEQIMEAGCVTGDRIN 131
           KH+G++VKVFEKDLSA+RGEG+HRGPI            ID+ V ++IME GCVTG+RIN
Sbjct: 74  KHRGYEVKVFEKDLSAIRGEGRHRGPIQLMSSALSVLEAIDESVVKKIMEVGCVTGNRIN 133

Query: 132 GLADGVSGEWFTQFDLSTPALQRALPVTRVICRMALQDILLNAVGLDIVSNKSKVVDFIE 191
           GLADGVSGEWFT+ DL TPA ++ LP+T VICRM LQDIL+NA+G +I+ NKSKVVDFI+
Sbjct: 134 GLADGVSGEWFTELDLLTPASRKGLPLTLVICRMTLQDILVNAIGSNILKNKSKVVDFIQ 193

Query: 192 DSSKVTVILEDGRRYNGDVLVGADGIWSKVR 222
           + SKV V+LE+G+ Y+GD+LVGADGIWS+VR
Sbjct: 194 EPSKVRVVLENGQHYDGDILVGADGIWSEVR 224


>IMGA|Medtr5g017270.1 FAD-dependent pyridine nucleotide-disulphide
           oxidoreductase chr05_pseudomolecule_IMGAG_V3
           6175728-6179564 E EGN_Mt090430 20090702
          Length = 336

 Score =  202 bits (514), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 94/151 (62%), Positives = 117/151 (77%)

Query: 72  KHKGFDVKVFEKDLSAVRGEGKHRGPIXXXXXXXXXXXXIDKQVAEQIMEAGCVTGDRIN 131
           K KGF+V VFEKDLSA+RGEG++RGPI            ID  VA+++M  GC+TGDRIN
Sbjct: 95  KRKGFEVVVFEKDLSAIRGEGQYRGPIQIQSNALAALEAIDMNVADEVMRVGCITGDRIN 154

Query: 132 GLADGVSGEWFTQFDLSTPALQRALPVTRVICRMALQDILLNAVGLDIVSNKSKVVDFIE 191
           GL DGVSG W+ +FD  TPA +R LPVTRVI RMALQ+IL  AVG D++ N S VVDFI+
Sbjct: 155 GLVDGVSGSWYIKFDTFTPAAERGLPVTRVISRMALQEILARAVGDDVIMNGSNVVDFID 214

Query: 192 DSSKVTVILEDGRRYNGDVLVGADGIWSKVR 222
             +KVTV+L++G++Y+GD+LVGADGIWSKVR
Sbjct: 215 HETKVTVVLDNGQKYDGDLLVGADGIWSKVR 245


>IMGA|CU571152_22.1 Forkhead-associated CU571152.5 100554-94827 E
           EGN_Mt090430 20090702
          Length = 663

 Score =  200 bits (508), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 96/151 (63%), Positives = 114/151 (75%)

Query: 72  KHKGFDVKVFEKDLSAVRGEGKHRGPIXXXXXXXXXXXXIDKQVAEQIMEAGCVTGDRIN 131
           K KGF+V VFEKDLSAVRGEG++RGPI            ID  VA+++M  GC+TGDRIN
Sbjct: 100 KRKGFEVMVFEKDLSAVRGEGQYRGPIQIQSNALAALEAIDSDVADEVMRVGCITGDRIN 159

Query: 132 GLADGVSGEWFTQFDLSTPALQRALPVTRVICRMALQDILLNAVGLDIVSNKSKVVDFIE 191
           GL DGVSG W+ +FD  TPA++R LPVTRVI RM LQ IL  AVG DIV N S VV+F +
Sbjct: 160 GLVDGVSGSWYVKFDTFTPAVERGLPVTRVISRMTLQGILARAVGEDIVLNASNVVNFAD 219

Query: 192 DSSKVTVILEDGRRYNGDVLVGADGIWSKVR 222
           D +KVTV LE+G++Y GD+LVGADGIWSKVR
Sbjct: 220 DGNKVTVELENGQKYEGDLLVGADGIWSKVR 250