Jatropha Genome Database

JcCB0400811.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0400811.10 - phase: 0 
         (231 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g014150.1 Phosphoglucomutase/phosphomannomutase alpha...   354   2e-98

>IMGA|Medtr5g014150.1 Phosphoglucomutase/phosphomannomutase
           alpha/beta/alpha domain I chr05_pseudomolecule_IMGAG_V3
           4477559-4471917 E EGN_Mt090430 20090702
          Length = 555

 Score =  354 bits (908), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 171/232 (73%), Positives = 200/232 (86%), Gaps = 1/232 (0%)

Query: 1   MNDRQKSFILYSSTNFPLPQGVRLSYGTAGFRADASILQSTVFRVGILAALRSLKTQSVI 60
           MN+ QKS +L SS+ F L QGV++SYGTAGFR DASIL STV+RVGILAALRSLKTQSVI
Sbjct: 1   MNEEQKSLLLESSSRFLLSQGVKVSYGTAGFREDASILSSTVYRVGILAALRSLKTQSVI 60

Query: 61  GLMITASHNKVSDNGVKVADPSGGMLIQDWEPFADAIANAATPINLVQLIDEFVKKENIL 120
           G+MITASHNK SDNGVK+ADP+GGML Q WEPFAD +ANA +P  L+QLI+EFV+KE I 
Sbjct: 61  GVMITASHNKFSDNGVKIADPNGGMLSQHWEPFADKLANAPSPQQLLQLINEFVEKERIP 120

Query: 121 FDGARSAEVLLGRDTRPSGLFLIEAAKQGVNSIVGALALDMGILTTPQLHWMVRARNKGM 180
           FDG R AE+LLGRDTRPSG  L+EAA+QGV SIVGA+A DMGILTTPQLHWMVRARNKG+
Sbjct: 121 FDGVRPAEILLGRDTRPSGEALLEAARQGVTSIVGAVASDMGILTTPQLHWMVRARNKGI 180

Query: 181 KATEDDYYEQLSSSFRCLTDLIPNGHKI-NEVDDRLVVDGANGVGAEKIQVL 231
           KA+E DY+EQL+SSFRCL DLIP   K+ + V+D+LVVDGANGVG  K+++L
Sbjct: 181 KASEQDYFEQLTSSFRCLMDLIPTERKVFDGVNDKLVVDGANGVGGAKLRIL 232